Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27m16
(599 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 230 2e-59
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 191 1e-47
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 155 1e-36
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 127 2e-28
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 126 3e-28
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 120 3e-26
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 112 7e-24
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 106 3e-22
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 105 1e-21
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 103 3e-21
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 100 2e-20
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 100 3e-20
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 92 8e-18
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 70 4e-11
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 59 9e-08
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 49 1e-04
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 43 0.005
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 42 0.008
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 38 0.24
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.32
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.55
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 36 0.73
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 36 0.97
UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD... 35 1.7
UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 34 2.9
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_Q4Z220 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 33 6.8
UniRef50_A6G0N7 Cluster: Serine/threonine protein kinase; n=1; P... 32 9.0
UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211; Bacter... 32 9.0
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 32 9.0
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 32 9.0
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 230 bits (563), Expect = 2e-59
Identities = 107/123 (86%), Positives = 115/123 (93%)
Frame = +2
Query: 230 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 409
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 410 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 589
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 590 GRA 598
GRA
Sbjct: 129 GRA 131
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 191 bits (465), Expect = 1e-47
Identities = 89/117 (76%), Positives = 103/117 (88%), Gaps = 1/117 (0%)
Frame = +2
Query: 251 EIKLFGRWSCYDVQVSDMSLQDYISV-KEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTN 427
E+KLF RWS DVQ+SD+SL DYI V K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 428 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRA 598
SLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV+V A++NSGPRED+TRIG A
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSA 124
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 155 bits (375), Expect = 1e-36
Identities = 81/134 (60%), Positives = 100/134 (74%)
Frame = +2
Query: 197 AGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYA 376
A S++ + +SL + IKLF ++ V+V D+SL DYI++ + LPH+AGR+
Sbjct: 2 AASIIPKEVSLDETG---HIKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQ 56
Query: 377 HKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAII 556
KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHAFEII LLT +NPLQVLV A+
Sbjct: 57 TKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVA 116
Query: 557 NSGPREDSTRIGRA 598
GPREDSTRIG A
Sbjct: 117 ACGPREDSTRIGSA 130
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 127 bits (306), Expect = 2e-28
Identities = 62/113 (54%), Positives = 81/113 (71%)
Frame = +2
Query: 251 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 430
E+K+FG+W +V+V D L+DYI +K Y LPH+ GR+A KRF KA+ PIVERL N
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLKPMY---LPHTGGRHAKKRFAKAEVPIVERLINR 68
Query: 431 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 589
+M +N GKK +A IVK AF+IIH TGENP+QVLV A+ N+ PRE++T I
Sbjct: 69 VMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTI 121
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 126 bits (305), Expect = 3e-28
Identities = 54/116 (46%), Positives = 80/116 (68%)
Frame = +2
Query: 251 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 430
++K+F RW V+++D+S+ +YI +KY + +PHS+G Y K F+K CPI+ERL S
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNYDKKPFKKTYCPILERLVCS 78
Query: 431 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRA 598
LM+ RN+GKK+ + IVKHAF ++H TG+NP+Q+LV AI N P EDS + +
Sbjct: 79 LMLKSRNSGKKIKTIAIVKHAFYLLHKTTGKNPIQLLVDAISNCAPHEDSLMLSNS 134
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 120 bits (288), Expect = 3e-26
Identities = 62/112 (55%), Positives = 76/112 (67%)
Frame = +2
Query: 254 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 433
I LFG+WS DV V D L+ YI +K LPH+ GRY + RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPVI---LPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 434 MMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 589
M GRN GKK A IVK AF++I+ TG+NPLQV + AIIN+ PRE+ TRI
Sbjct: 96 MRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRI 147
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 112 bits (269), Expect = 7e-24
Identities = 58/116 (50%), Positives = 80/116 (68%)
Frame = +2
Query: 251 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 430
EI LF ++S +V+V+++SL+ YI++ + +PH+A KA+ PI ER S
Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLSRR--GIVPHAATTITKGTTGKARIPIAERFVCS 79
Query: 431 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRA 598
LM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+NSGPRED+ RIGRA
Sbjct: 80 LMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGRA 135
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 106 bits (255), Expect = 3e-22
Identities = 56/141 (39%), Positives = 86/141 (60%)
Frame = +2
Query: 167 EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 346
E+ D+ EA + +T + A KLFG+W ++ D S + Y++V
Sbjct: 4 EQPAEDETEEAAAESEDTQEVAANA-----KLFGKWDVAEIHYEDPSTRRYLAVTP---- 54
Query: 347 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 526
+ H+ GR+A K+F+K++ IVERL N LM G N GKK A++IV+ AF+I+H T EN
Sbjct: 55 -VAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDEN 113
Query: 527 PLQVLVTAIINSGPREDSTRI 589
P+QVLV+A+ N+ PRE++ R+
Sbjct: 114 PIQVLVSAVENAAPREETVRL 134
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 105 bits (251), Expect = 1e-21
Identities = 48/111 (43%), Positives = 77/111 (69%)
Frame = +2
Query: 257 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 436
K+FG+W +V+V D+ ++ Y+S+ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPVI---VPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 437 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 589
N GKK + +R V+ AF+I++ T +NP+QVLV AI N+GPRE+ R+
Sbjct: 63 RTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRL 113
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 103 bits (247), Expect = 3e-21
Identities = 53/127 (41%), Positives = 80/127 (62%), Gaps = 2/127 (1%)
Frame = +2
Query: 215 ETMSLPQAADIPEIK--LFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 388
E + P+ P+ K LF +W +V+V+D SL Y+++ + +PHS G+++ + F
Sbjct: 5 EVKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQI---IPHSCGKFSRQEF 61
Query: 389 RKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 568
KA IVERL N LM N GKK +A+ IV+ AFE+I+ T NP++VLV AI N+GP
Sbjct: 62 NKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGP 121
Query: 569 REDSTRI 589
RE++ R+
Sbjct: 122 REETVRL 128
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 100 bits (240), Expect = 2e-20
Identities = 59/129 (45%), Positives = 78/129 (60%), Gaps = 16/129 (12%)
Frame = +2
Query: 251 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 430
EIK+ GRWS DV+V D SL+ YI+++ + LPH+ GR+A K F KA IVERL N
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLEPRL---LPHTHGRHAKKHFGKANVHIVERLINK 73
Query: 431 LMMHGRN----------------NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINS 562
+M G + N KK+ A +VK AF+II TG+NP+QVLV AI N+
Sbjct: 74 VMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENA 133
Query: 563 GPREDSTRI 589
PRED+T +
Sbjct: 134 APREDTTSV 142
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 100 bits (239), Expect = 3e-20
Identities = 53/113 (46%), Positives = 71/113 (62%)
Frame = +2
Query: 251 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 430
EIKLFG+W V V D SL+ +IS+ +PH+AGR + K F K + +VERL N
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLNPVL---IPHTAGRNSKKMFDKNKMHVVERLANK 64
Query: 431 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 589
LM N GKK + I++ A I+ T ENP+QV+V A+ NSGPRE++TRI
Sbjct: 65 LMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRI 117
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 92.3 bits (219), Expect = 8e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +2
Query: 395 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 550
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 70.1 bits (164), Expect = 4e-11
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Frame = +2
Query: 287 VQVSDMSLQDYISVKEKYAKYLP-HSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKK 463
+Q+ D L YI++ YL + GR+++ K +ERL N+LM + GKK
Sbjct: 9 IQIKDQGLATYINL----TSYLNLDTGGRFSNYLSGKRNVNTIERLLNNLMRTEKWTGKK 64
Query: 464 LMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 589
A +++ AF+II T +NP+Q+LV+AI NS PRE+ TR+
Sbjct: 65 YSAYKVMSQAFDIIATKTKQNPVQILVSAIENSAPREEVTRL 106
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 58.8 bits (136), Expect = 9e-08
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +2
Query: 497 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRA 598
++ HLL +NPLQVLV AIINSGPREDSTRIGRA
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRA 207
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +2
Query: 161 MAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 325
M+E D+ E V E + Q A++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = -3
Query: 501 ISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWALRKRLCAYLPAE*GKYFAY 337
+S A LT+ A FLP+F P I F+ ST+G W L KRLC+ LP G+Y +
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLPPVCGRYTGF 55
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 43.2 bits (97), Expect = 0.005
Identities = 26/63 (41%), Positives = 34/63 (53%)
Frame = +2
Query: 380 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 559
KRF +A L + L+ +GKK +A IV AFEII + T E+PL V AI N
Sbjct: 9 KRFPEADSTYNSYLVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRN 68
Query: 560 SGP 568
+ P
Sbjct: 69 ASP 71
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 42.3 bits (95), Expect = 0.008
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +2
Query: 368 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 547
+YA+K+ P V+ LTN +M H GKK A ++V A I+ L ++P++VL
Sbjct: 105 KYANKKIPLRSDPTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRE 160
Query: 548 AIINSGP 568
+ GP
Sbjct: 161 TLDKLGP 167
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 37.5 bits (83), Expect = 0.24
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +2
Query: 410 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 568
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISP 174
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 37.1 bits (82), Expect = 0.32
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 416 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 553
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAI 66
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 36.3 bits (80), Expect = 0.55
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +2
Query: 404 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 568
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAP 214
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 35.9 bits (79), Expect = 0.73
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +2
Query: 371 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 550
+A+KR P ++ TN +M +GKK A +I+ A I++L T ++PL +L
Sbjct: 118 FANKRIPLPSNPTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEET 173
Query: 551 IINSGP 568
+ P
Sbjct: 174 LDKMAP 179
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 35.5 bits (78), Expect = 0.97
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 404 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 568
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ + P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAP 189
>UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD+]
2, mitochondrial precursor; n=37; Saccharomycetales|Rep:
Glycerol-3-phosphate dehydrogenase [NAD+] 2,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 440
Score = 34.7 bits (76), Expect = 1.7
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +2
Query: 146 F*VPIMAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 325
F V ++ NW +A+ V+ E L PE+++ W +D ++ D +L D I+
Sbjct: 84 FKVTVIGSGNWGTTIAK---VIAENTELHSHIFEPEVRM---W-VFDEKIGDENLTDIIN 136
Query: 326 VKEKYAKYLPH 358
+ + KYLP+
Sbjct: 137 TRHQNVKYLPN 147
>UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. CcI3|Rep: Putative uncharacterized protein -
Frankia sp. (strain CcI3)
Length = 374
Score = 34.3 bits (75), Expect = 2.2
Identities = 28/96 (29%), Positives = 40/96 (41%)
Frame = +2
Query: 305 SLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV 484
+LQ + + K A P +A R R + TN L G +G +A+
Sbjct: 93 NLQQELEYRNKVAPVAPAAADRTLRMRVSLHVGSTTDSGTNRL---GDGSGAARIALHRQ 149
Query: 485 KHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIG 592
A + HLL NP LV AI++S ED+ G
Sbjct: 150 LDAAAVRHLLEESNPRTTLVAAILSSRAYEDAVLSG 185
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 33.9 bits (74), Expect = 2.9
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +2
Query: 158 IMAEENWNDDVAEAGSVVVE-TMSLPQAADIPEIKLF--GRWSCYDVQVSDMSLQDYISV 328
++AEENW +A+AG + + MS+ +D+ E+ L+ GR + ++++ D + Y S
Sbjct: 207 LVAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCLWGAGRGNIGEIELQDH--KQYPSS 264
Query: 329 KEKYAKYLPHSAG 367
+ K+ + P G
Sbjct: 265 EFKFKTFTPPKTG 277
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 33.1 bits (72), Expect = 5.1
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +2
Query: 413 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP--LQVLVTAIINSGPREDSTR 586
ER ++ L+ + +K + V++ KH FEI+H + G P + VL T +++S R+ +
Sbjct: 477 ERNSSKLLSQRQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS-LRDGNNP 534
Query: 587 IG 592
IG
Sbjct: 535 IG 536
>UniRef50_Q4Z220 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 36
Score = 32.7 bits (71), Expect = 6.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 99 WYYKFCQVTVNKYNNIFRYQSWPRR 173
+YY + ++ +NKYN +F Y+ PRR
Sbjct: 10 FYYLYMKIFINKYNKVFYYKIVPRR 34
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 32.7 bits (71), Expect = 6.8
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = +2
Query: 374 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 553
A KR K+ RL N ++ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAI 66
>UniRef50_A6G0N7 Cluster: Serine/threonine protein kinase; n=1;
Plesiocystis pacifica SIR-1|Rep: Serine/threonine
protein kinase - Plesiocystis pacifica SIR-1
Length = 592
Score = 32.3 bits (70), Expect = 9.0
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 182 DDVAEAGSVVVETMSLPQAADIPEIKLFGR 271
DD+ G VV++ +SL QAAD +++LF R
Sbjct: 56 DDLDSGGPVVIKELSLAQAADWKQVELFER 85
>UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211;
Bacteria|Rep: 30S ribosomal protein S7 - Streptococcus
pneumoniae
Length = 156
Score = 32.3 bits (70), Expect = 9.0
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +2
Query: 407 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 568
+V RL N +M+ +GK+ A IV AFE I TG + L+V TA+ N P
Sbjct: 22 LVTRLINRVML----DGKRGTAASIVYGAFEQIKEATGNDALEVFETAMENIMP 71
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 32.3 bits (70), Expect = 9.0
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 404 PIVERLTNSLMMHG-RNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPR 571
PI +++ ++++ NGKK +A RIV F I +NP++V A+ N PR
Sbjct: 16 PIYNKVSVHMLVNRILKNGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPR 72
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 32.3 bits (70), Expect = 9.0
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +2
Query: 416 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 553
RL N L+ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 21 RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAI 66
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,511,189
Number of Sequences: 1657284
Number of extensions: 11402449
Number of successful extensions: 26742
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 26056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26727
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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