Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27m05
(452 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin iso... 186 9e-48
U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin pro... 186 9e-48
U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin pro... 186 9e-48
U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin pro... 129 8e-31
AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical... 129 1e-30
AF393636-1|AAM19304.1| 222|Caenorhabditis elegans cyclophilin-1... 129 1e-30
Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical pr... 126 6e-30
Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical pr... 126 6e-30
U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin iso... 126 6e-30
AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin M... 126 6e-30
AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical ... 110 4e-25
Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical pr... 97 7e-21
U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin iso... 97 7e-21
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 96 1e-20
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 96 1e-20
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 96 1e-20
Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical pr... 94 5e-20
Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical p... 94 5e-20
U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin iso... 94 5e-20
U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin iso... 94 5e-20
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 91 3e-19
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 91 3e-19
U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin iso... 89 2e-18
U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1 p... 89 2e-18
U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin pro... 89 2e-18
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 89 2e-18
AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical ... 89 2e-18
AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical ... 89 2e-18
U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin iso... 87 6e-18
AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical ... 87 6e-18
Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical pr... 84 5e-17
U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin pro... 83 1e-16
U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin pro... 83 1e-16
Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical pr... 81 3e-16
U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin iso... 81 3e-16
U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical pr... 75 2e-14
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 60 7e-10
Z81095-1|CAB03158.1| 667|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z78414-3|CAD60425.1| 309|Caenorhabditis elegans Hypothetical pr... 27 6.4
>U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin
isoform 10 protein.
Length = 147
Score = 186 bits (452), Expect = 9e-48
Identities = 83/124 (66%), Positives = 96/124 (77%)
Frame = +3
Query: 81 MAVTLHTDVGDIKIELYCEQCPKACENFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXX 260
M+VTLHT GDIKIELY + PKACENFLALCASDYYNGC+FHRNIK F+VQ
Sbjct: 1 MSVTLHTTSGDIKIELYVDDAPKACENFLALCASDYYNGCIFHRNIKDFMVQTGDPTHSG 60
Query: 261 XXXXSIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYGR 440
SIWG FEDE LKH++RG VSMANNGP++N SQFFITY +Q HLD+KYT++G+
Sbjct: 61 KGGESIWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGK 120
Query: 441 VIDG 452
VIDG
Sbjct: 121 VIDG 124
>U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin
protein 10, isoform a protein.
Length = 147
Score = 186 bits (452), Expect = 9e-48
Identities = 83/124 (66%), Positives = 96/124 (77%)
Frame = +3
Query: 81 MAVTLHTDVGDIKIELYCEQCPKACENFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXX 260
M+VTLHT GDIKIELY + PKACENFLALCASDYYNGC+FHRNIK F+VQ
Sbjct: 1 MSVTLHTTSGDIKIELYVDDAPKACENFLALCASDYYNGCIFHRNIKDFMVQTGDPTHSG 60
Query: 261 XXXXSIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYGR 440
SIWG FEDE LKH++RG VSMANNGP++N SQFFITY +Q HLD+KYT++G+
Sbjct: 61 KGGESIWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGK 120
Query: 441 VIDG 452
VIDG
Sbjct: 121 VIDG 124
>U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin
protein 10, isoform b protein.
Length = 161
Score = 186 bits (452), Expect = 9e-48
Identities = 83/124 (66%), Positives = 96/124 (77%)
Frame = +3
Query: 81 MAVTLHTDVGDIKIELYCEQCPKACENFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXX 260
M+VTLHT GDIKIELY + PKACENFLALCASDYYNGC+FHRNIK F+VQ
Sbjct: 1 MSVTLHTTSGDIKIELYVDDAPKACENFLALCASDYYNGCIFHRNIKDFMVQTGDPTHSG 60
Query: 261 XXXXSIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYGR 440
SIWG FEDE LKH++RG VSMANNGP++N SQFFITY +Q HLD+KYT++G+
Sbjct: 61 KGGESIWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGK 120
Query: 441 VIDG 452
VIDG
Sbjct: 121 VIDG 124
>U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin
protein 12 protein.
Length = 169
Score = 129 bits (312), Expect = 8e-31
Identities = 61/122 (50%), Positives = 75/122 (61%)
Frame = +3
Query: 87 VTLHTDVGDIKIELYCEQCPKACENFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXXXX 266
V L T +G I +ELY P+ C+NF L +YYNG +FHR I F++Q
Sbjct: 12 VILDTTMGKIALELYWNHAPRTCQNFSQLAKRNYYNGTIFHRIIADFMIQGGDPTGTGRG 71
Query: 267 XXSIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYGRVI 446
SI+G KF DEI + LKH G++SMAN GPNTNGSQFFIT HLD K+TI+GRV
Sbjct: 72 GASIYGDKFSDEIDERLKHTGAGILSMANAGPNTNGSQFFITLAPTQHLDGKHTIFGRVA 131
Query: 447 DG 452
G
Sbjct: 132 AG 133
>AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical
protein Y17G7B.9 protein.
Length = 483
Score = 129 bits (311), Expect = 1e-30
Identities = 62/130 (47%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Frame = +3
Query: 60 ISYNLETMAVTLHTDVGDIKIELYCEQCPKACENFLALCASDYYNGCLFHRNIKGFIVQX 239
I+ + T VTL T GDI+IEL+ ++ P AC NF+ LC +YY G +FHR +K FI+Q
Sbjct: 6 INEPITTGKVTLETTAGDIEIELWTKEAPLACRNFIQLCMENYYKGTVFHRLVKNFILQG 65
Query: 240 XXXXXXXXXXXSIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQ--PHL 413
SI+G+ F+DEI LK N RG+V MAN G + NGSQFF T G++ P L
Sbjct: 66 GDPTATGTGGESIYGKPFKDEIHQRLKFNRRGIVGMANAGRDDNGSQFFFTIGDRGAPEL 125
Query: 414 DLKYTIYGRV 443
D K+TI+G+V
Sbjct: 126 DKKHTIFGKV 135
>AF393636-1|AAM19304.1| 222|Caenorhabditis elegans cyclophilin-16
protein.
Length = 222
Score = 129 bits (311), Expect = 1e-30
Identities = 62/130 (47%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Frame = +3
Query: 60 ISYNLETMAVTLHTDVGDIKIELYCEQCPKACENFLALCASDYYNGCLFHRNIKGFIVQX 239
I+ + T VTL T GDI+IEL+ ++ P AC NF+ LC +YY G +FHR +K FI+Q
Sbjct: 6 INEPITTGKVTLETTAGDIEIELWTKEAPLACRNFIQLCMENYYKGTVFHRLVKNFILQG 65
Query: 240 XXXXXXXXXXXSIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQ--PHL 413
SI+G+ F+DEI LK N RG+V MAN G + NGSQFF T G++ P L
Sbjct: 66 GDPTATGTGGESIYGKPFKDEIHQRLKFNRRGIVGMANAGRDDNGSQFFFTIGDRGAPEL 125
Query: 414 DLKYTIYGRV 443
D K+TI+G+V
Sbjct: 126 DKKHTIFGKV 135
>Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 126 bits (305), Expect = 6e-30
Identities = 58/122 (47%), Positives = 77/122 (63%)
Frame = +3
Query: 87 VTLHTDVGDIKIELYCEQCPKACENFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXXXX 266
V L T+ G + +EL+ + PKACENF+ C++ YYN FHR IK F++Q
Sbjct: 282 VRLVTNFGPLNLELFAPKVPKACENFITHCSNGYYNNTKFHRLIKNFMLQGGDPTGTGHG 341
Query: 267 XXSIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYGRVI 446
SIW + F DE H+ARGV+SMAN G NTNGSQFFIT+ +LD K+TI+GR++
Sbjct: 342 GESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLV 401
Query: 447 DG 452
G
Sbjct: 402 GG 403
>Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 126 bits (305), Expect = 6e-30
Identities = 58/122 (47%), Positives = 77/122 (63%)
Frame = +3
Query: 87 VTLHTDVGDIKIELYCEQCPKACENFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXXXX 266
V L T+ G + +EL+ + PKACENF+ C++ YYN FHR IK F++Q
Sbjct: 282 VRLVTNFGPLNLELFAPKVPKACENFITHCSNGYYNNTKFHRLIKNFMLQGGDPTGTGHG 341
Query: 267 XXSIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYGRVI 446
SIW + F DE H+ARGV+SMAN G NTNGSQFFIT+ +LD K+TI+GR++
Sbjct: 342 GESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLV 401
Query: 447 DG 452
G
Sbjct: 402 GG 403
>U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin
isoform 4 protein.
Length = 523
Score = 126 bits (305), Expect = 6e-30
Identities = 58/122 (47%), Positives = 77/122 (63%)
Frame = +3
Query: 87 VTLHTDVGDIKIELYCEQCPKACENFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXXXX 266
V L T+ G + +EL+ + PKACENF+ C++ YYN FHR IK F++Q
Sbjct: 282 VRLVTNFGPLNLELFAPKVPKACENFITHCSNGYYNNTKFHRLIKNFMLQGGDPTGTGHG 341
Query: 267 XXSIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYGRVI 446
SIW + F DE H+ARGV+SMAN G NTNGSQFFIT+ +LD K+TI+GR++
Sbjct: 342 GESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLV 401
Query: 447 DG 452
G
Sbjct: 402 GG 403
>AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin
MOG-6 protein.
Length = 523
Score = 126 bits (305), Expect = 6e-30
Identities = 58/122 (47%), Positives = 77/122 (63%)
Frame = +3
Query: 87 VTLHTDVGDIKIELYCEQCPKACENFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXXXX 266
V L T+ G + +EL+ + PKACENF+ C++ YYN FHR IK F++Q
Sbjct: 282 VRLVTNFGPLNLELFAPKVPKACENFITHCSNGYYNNTKFHRLIKNFMLQGGDPTGTGHG 341
Query: 267 XXSIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYGRVI 446
SIW + F DE H+ARGV+SMAN G NTNGSQFFIT+ +LD K+TI+GR++
Sbjct: 342 GESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLV 401
Query: 447 DG 452
G
Sbjct: 402 GG 403
>AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical
protein Y87G2A.6 protein.
Length = 629
Score = 110 bits (265), Expect = 4e-25
Identities = 57/121 (47%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Frame = +3
Query: 93 LHTDVGDIKIELYCEQCPKACENFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXXXXXX 272
+HT GDI I L+ ++CPK ENF YYNG FHR IK F++Q
Sbjct: 478 IHTSFGDITIRLFGDECPKTVENFCTHSRRGYYNGLTFHRVIKSFMIQTGDPSGKGTGGE 537
Query: 273 SIWGRKFEDEIKDELKHNARGVVSMAN-NGPNTNGSQFFITYGEQPHLDLKYTIYGRVID 449
SIWG FEDE L+H+ VSMAN G NTNGSQFFIT LD K T++G V
Sbjct: 538 SIWGEDFEDEFHPRLRHDKPFKVSMANAGGGNTNGSQFFITVCPADWLDGKNTLFGEVTA 597
Query: 450 G 452
G
Sbjct: 598 G 598
>Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical
protein T01B7.4 protein.
Length = 183
Score = 96.7 bits (230), Expect = 7e-21
Identities = 53/125 (42%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
Frame = +3
Query: 105 VGDIKIELYCEQCPKACENFLALCASDY--------YNGCLFHRNIKGFIVQXXXXXXXX 260
+G I IEL+ + P+ ENF C +Y Y C FHR IK F++Q
Sbjct: 30 IGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTFHRVIKDFMIQGGDFCNGD 89
Query: 261 XXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYG 437
SI+G KF DE ELKH G++SMAN G +TNG QFFIT + LD K+ ++G
Sbjct: 90 GTGLMSIYGSKFRDE-NFELKHIGPGMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFG 148
Query: 438 RVIDG 452
RV+DG
Sbjct: 149 RVLDG 153
>U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin
isoform 11 (CYP-11) protein.
Length = 183
Score = 96.7 bits (230), Expect = 7e-21
Identities = 53/125 (42%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
Frame = +3
Query: 105 VGDIKIELYCEQCPKACENFLALCASDY--------YNGCLFHRNIKGFIVQXXXXXXXX 260
+G I IEL+ + P+ ENF C +Y Y C FHR IK F++Q
Sbjct: 30 IGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTFHRVIKDFMIQGGDFCNGD 89
Query: 261 XXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYG 437
SI+G KF DE ELKH G++SMAN G +TNG QFFIT + LD K+ ++G
Sbjct: 90 GTGLMSIYGSKFRDE-NFELKHIGPGMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFG 148
Query: 438 RVIDG 452
RV+DG
Sbjct: 149 RVLDG 153
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 95.9 bits (228), Expect = 1e-20
Identities = 55/125 (44%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Frame = +3
Query: 108 GDIKIELYCEQCPKACENFLALCASDY---------YNGCLFHRNIKGFIVQXXXXXXXX 260
G I L+ CP+ ENF A C + Y G +FHR IKGF++Q
Sbjct: 23 GRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQGSVFHRVIKGFMIQGGDITHGN 82
Query: 261 XXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYG 437
SI+GR F+DE LKH ++SMAN GP+TNGSQFFIT E PHLD K+ ++G
Sbjct: 83 GTGGYSIYGRTFDDE-NLALKHKKPYLLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFG 141
Query: 438 RVIDG 452
VI G
Sbjct: 142 EVIKG 146
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 95.9 bits (228), Expect = 1e-20
Identities = 55/125 (44%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Frame = +3
Query: 108 GDIKIELYCEQCPKACENFLALCASDY---------YNGCLFHRNIKGFIVQXXXXXXXX 260
G I L+ CP+ ENF A C + Y G +FHR IKGF++Q
Sbjct: 23 GRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQGSVFHRVIKGFMIQGGDITHGN 82
Query: 261 XXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYG 437
SI+GR F+DE LKH ++SMAN GP+TNGSQFFIT E PHLD K+ ++G
Sbjct: 83 GTGGYSIYGRTFDDE-NLALKHKKPYLLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFG 141
Query: 438 RVIDG 452
VI G
Sbjct: 142 EVIKG 146
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 95.9 bits (228), Expect = 1e-20
Identities = 55/125 (44%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Frame = +3
Query: 108 GDIKIELYCEQCPKACENFLALCASDY---------YNGCLFHRNIKGFIVQXXXXXXXX 260
G I L+ CP+ ENF A C + Y G +FHR IKGF++Q
Sbjct: 23 GRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQGSVFHRVIKGFMIQGGDITHGN 82
Query: 261 XXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYG 437
SI+GR F+DE LKH ++SMAN GP+TNGSQFFIT E PHLD K+ ++G
Sbjct: 83 GTGGYSIYGRTFDDE-NLALKHKKPYLLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFG 141
Query: 438 RVIDG 452
VI G
Sbjct: 142 EVIKG 146
>Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 93.9 bits (223), Expect = 5e-20
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 12/128 (9%)
Frame = +3
Query: 105 VGDIKIELYCEQCPKACENFLALCASD-----------YYNGCLFHRNIKGFIVQXXXXX 251
+G I+I L+ E PK CENF ALC + +Y FHR +K F++Q
Sbjct: 18 IGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDIT 77
Query: 252 XXXXXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYT 428
SI+GR F+DE K +LKH+ ++SMAN GPN+N SQFFIT PH + K+
Sbjct: 78 EGDGRGGFSIYGRYFDDE-KFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHV 136
Query: 429 IYGRVIDG 452
++G V+ G
Sbjct: 137 VFGEVVKG 144
>Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 93.9 bits (223), Expect = 5e-20
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 12/128 (9%)
Frame = +3
Query: 105 VGDIKIELYCEQCPKACENFLALCASD-----------YYNGCLFHRNIKGFIVQXXXXX 251
+G I+I L+ E PK CENF ALC + +Y FHR +K F++Q
Sbjct: 18 IGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDIT 77
Query: 252 XXXXXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYT 428
SI+GR F+DE K +LKH+ ++SMAN GPN+N SQFFIT PH + K+
Sbjct: 78 EGDGRGGFSIYGRYFDDE-KFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHV 136
Query: 429 IYGRVIDG 452
++G V+ G
Sbjct: 137 VFGEVVKG 144
>U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 93.9 bits (223), Expect = 5e-20
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 12/128 (9%)
Frame = +3
Query: 105 VGDIKIELYCEQCPKACENFLALCASD-----------YYNGCLFHRNIKGFIVQXXXXX 251
+G I+I L+ E PK CENF ALC + +Y FHR +K F++Q
Sbjct: 18 IGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDIT 77
Query: 252 XXXXXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYT 428
SI+GR F+DE K +LKH+ ++SMAN GPN+N SQFFIT PH + K+
Sbjct: 78 EGDGRGGFSIYGRYFDDE-KFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHV 136
Query: 429 IYGRVIDG 452
++G V+ G
Sbjct: 137 VFGEVVKG 144
>U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 93.9 bits (223), Expect = 5e-20
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 12/128 (9%)
Frame = +3
Query: 105 VGDIKIELYCEQCPKACENFLALCASD-----------YYNGCLFHRNIKGFIVQXXXXX 251
+G I+I L+ E PK CENF ALC + +Y FHR +K F++Q
Sbjct: 18 IGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDIT 77
Query: 252 XXXXXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYT 428
SI+GR F+DE K +LKH+ ++SMAN GPN+N SQFFIT PH + K+
Sbjct: 78 EGDGRGGFSIYGRYFDDE-KFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHV 136
Query: 429 IYGRVIDG 452
++G V+ G
Sbjct: 137 VFGEVVKG 144
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 91.5 bits (217), Expect = 3e-19
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
Frame = +3
Query: 81 MAVTLHTDVGDIKIELYCEQCPKACENFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXX 260
MAV + T +GD+ I+L+ ++ P+ NFL LC YYN FH + ++ Q
Sbjct: 1 MAVLIETTLGDLIIDLFVKERPRCSLNFLKLCKKKYYNLNQFHSIERNYVAQTGDPTGTG 60
Query: 261 XXXXSIW-------GRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQ-PHLD 416
S++ GR FE E +++H G+VS NNG N GSQFFIT GE +LD
Sbjct: 61 KGGESVYSDMYGEQGRYFEREDLPKMRHTRMGIVSFVNNGDNMLGSQFFITLGENLDYLD 120
Query: 417 LKYTIYGRVIDG 452
++TI+G+V +G
Sbjct: 121 DQHTIFGQVTEG 132
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 91.5 bits (217), Expect = 3e-19
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
Frame = +3
Query: 81 MAVTLHTDVGDIKIELYCEQCPKACENFLALCASDYYNGCLFHRNIKGFIVQXXXXXXXX 260
MAV + T +GD+ I+L+ ++ P+ NFL LC YYN FH + ++ Q
Sbjct: 1 MAVLIETTLGDLIIDLFVKERPRCSLNFLKLCKKKYYNLNQFHSIERNYVAQTGDPTGTG 60
Query: 261 XXXXSIW-------GRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQ-PHLD 416
S++ GR FE E +++H G+VS NNG N GSQFFIT GE +LD
Sbjct: 61 KGGESVYSDMYGEQGRYFEREDLPKMRHTRMGIVSFVNNGDNMLGSQFFITLGENLDYLD 120
Query: 417 LKYTIYGRVIDG 452
++TI+G+V +G
Sbjct: 121 DQHTIFGQVTEG 132
>U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin
isoform 2 (cyp-2) protein.
Length = 171
Score = 88.6 bits (210), Expect = 2e-18
Identities = 52/125 (41%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Frame = +3
Query: 108 GDIKIELYCEQCPKACENFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXXX 257
G I +ELY + PK ENF ALC + ++ G FHR I F++Q
Sbjct: 18 GRIVMELYNDIAPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGGDFTEG 77
Query: 258 XXXXXSIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYG 437
SI G KF+DE E KH GV+SMAN G NTNGSQFF+ + LD K+ ++G
Sbjct: 78 NGTGESIHGEKFDDENFKE-KHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGKHVVFG 136
Query: 438 RVIDG 452
+VI+G
Sbjct: 137 KVIEG 141
>U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1
protein.
Length = 192
Score = 88.6 bits (210), Expect = 2e-18
Identities = 52/126 (41%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Frame = +3
Query: 108 GDIKIELYCEQCPKACENFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXXX 257
G + +EL+ + PK ENF ALC + ++ G FHR I F++Q
Sbjct: 36 GRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRH 95
Query: 258 XXXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIY 434
SI+G KF+DE D LKH G +SMAN GPNTNGSQFFI + P LD + ++
Sbjct: 96 NGTGGESIYGNKFKDENFD-LKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHVVF 154
Query: 435 GRVIDG 452
G+V DG
Sbjct: 155 GQVTDG 160
>U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin
protein.
Length = 171
Score = 88.6 bits (210), Expect = 2e-18
Identities = 53/126 (42%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Frame = +3
Query: 108 GDIKIELYCEQCPKACENFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXXX 257
G I +ELY + PK ENF ALC + ++ G FHR I F++Q
Sbjct: 18 GRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQGGDFTRG 77
Query: 258 XXXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIY 434
SI+G KF DE E KH GV+SMAN GPNTNGSQFF+ + LD K+ ++
Sbjct: 78 NGTGGESIYGEKFPDENFKE-KHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDGKHVVF 136
Query: 435 GRVIDG 452
GRV++G
Sbjct: 137 GRVVEG 142
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 88.6 bits (210), Expect = 2e-18
Identities = 51/120 (42%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Frame = +3
Query: 105 VGDIKIELYCEQCPKACENFLALCASDY---YNGCLFHRNIKGFIVQXXXXXXXXXXXX- 272
+G I IEL + PK ENF LC + Y G +FHR I F++Q
Sbjct: 152 IGRIVIELRTDVTPKTAENFRCLCTGERGFGYEGSIFHRIIPKFMLQGGDFTKGDGTGGK 211
Query: 273 SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYGRVIDG 452
SI+G KF+DE L+H G VSMAN G NTNGSQFFI + LD K+ ++G V++G
Sbjct: 212 SIYGTKFDDE-NFTLRHTMPGTVSMANCGANTNGSQFFICTEKTDWLDGKHVVFGHVVEG 270
>AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical
protein Y49A3A.5 protein.
Length = 192
Score = 88.6 bits (210), Expect = 2e-18
Identities = 52/126 (41%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Frame = +3
Query: 108 GDIKIELYCEQCPKACENFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXXX 257
G + +EL+ + PK ENF ALC + ++ G FHR I F++Q
Sbjct: 36 GRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRH 95
Query: 258 XXXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIY 434
SI+G KF+DE D LKH G +SMAN GPNTNGSQFFI + P LD + ++
Sbjct: 96 NGTGGESIYGNKFKDENFD-LKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHVVF 154
Query: 435 GRVIDG 452
G+V DG
Sbjct: 155 GQVTDG 160
>AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical
protein Y75B12B.2 protein.
Length = 171
Score = 88.6 bits (210), Expect = 2e-18
Identities = 53/126 (42%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Frame = +3
Query: 108 GDIKIELYCEQCPKACENFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXXX 257
G I +ELY + PK ENF ALC + ++ G FHR I F++Q
Sbjct: 18 GRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQGGDFTRG 77
Query: 258 XXXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIY 434
SI+G KF DE E KH GV+SMAN GPNTNGSQFF+ + LD K+ ++
Sbjct: 78 NGTGGESIYGEKFPDENFKE-KHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDGKHVVF 136
Query: 435 GRVIDG 452
GRV++G
Sbjct: 137 GRVVEG 142
>U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin
isoform 3 protein.
Length = 173
Score = 87.0 bits (206), Expect = 6e-18
Identities = 52/126 (41%), Positives = 68/126 (53%), Gaps = 11/126 (8%)
Frame = +3
Query: 108 GDIKIELYCEQCPKACENFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXXX 257
G I +ELY + PK NF ALC + ++ G FHR I F++Q
Sbjct: 18 GRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRG 77
Query: 258 XXXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIY 434
SI+G KF DE E KH GV+SMAN GPNTNGSQFF+ + LD K+ ++
Sbjct: 78 NGTGGESIYGEKFPDENFKE-KHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVF 136
Query: 435 GRVIDG 452
GRV++G
Sbjct: 137 GRVVEG 142
>AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical
protein Y75B12B.5 protein.
Length = 173
Score = 87.0 bits (206), Expect = 6e-18
Identities = 52/126 (41%), Positives = 68/126 (53%), Gaps = 11/126 (8%)
Frame = +3
Query: 108 GDIKIELYCEQCPKACENFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXXX 257
G I +ELY + PK NF ALC + ++ G FHR I F++Q
Sbjct: 18 GRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRG 77
Query: 258 XXXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIY 434
SI+G KF DE E KH GV+SMAN GPNTNGSQFF+ + LD K+ ++
Sbjct: 78 NGTGGESIYGEKFPDENFKE-KHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVF 136
Query: 435 GRVIDG 452
GRV++G
Sbjct: 137 GRVVEG 142
>Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical
protein ZK520.5 protein.
Length = 172
Score = 83.8 bits (198), Expect = 5e-17
Identities = 52/126 (41%), Positives = 68/126 (53%), Gaps = 11/126 (8%)
Frame = +3
Query: 108 GDIKIELYCEQCPKACENFLALCASD----------YYNGCLFHRNIKGFIVQXXXXXXX 257
G I +ELY + PK ENF ALC + ++ G FHR I F++Q
Sbjct: 18 GRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGGDFTEG 77
Query: 258 XXXXX-SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIY 434
SI G KF+DE E KH GV+SMAN G NTNGSQFF+ + LD K+ ++
Sbjct: 78 NGTGGESIHGEKFDDENFKE-KHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGKHVVF 136
Query: 435 GRVIDG 452
G+VI+G
Sbjct: 137 GKVIEG 142
>U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin
protein.
Length = 201
Score = 82.6 bits (195), Expect = 1e-16
Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Frame = +3
Query: 105 VGDIKIELYCEQCPKACENFLALCA---SDYYNGCLFHRNIKGFIVQXXXXXXXXXXXX- 272
VG I I L+ E PK +NF+ L + Y G FHR I+ F++Q
Sbjct: 39 VGKIVIGLFGEVVPKTVKNFVELAQRAEGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGR 98
Query: 273 SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYGRVIDG 452
SI+G +FEDE +L+H G +SMAN G +TNGSQFFIT + LD K+ ++G++++G
Sbjct: 99 SIYGERFEDE-NFKLQHYGPGWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEG 157
>U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin
protein 6 protein.
Length = 201
Score = 82.6 bits (195), Expect = 1e-16
Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Frame = +3
Query: 105 VGDIKIELYCEQCPKACENFLALCA---SDYYNGCLFHRNIKGFIVQXXXXXXXXXXXX- 272
VG I I L+ E PK +NF+ L + Y G FHR I+ F++Q
Sbjct: 39 VGKIVIGLFGEVVPKTVKNFVELAQRAEGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGR 98
Query: 273 SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYGRVIDG 452
SI+G +FEDE +L+H G +SMAN G +TNGSQFFIT + LD K+ ++G++++G
Sbjct: 99 SIYGERFEDE-NFKLQHYGPGWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEG 157
>Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical
protein F31C3.1 protein.
Length = 204
Score = 81.4 bits (192), Expect = 3e-16
Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 4/120 (3%)
Frame = +3
Query: 105 VGDIKIELYCEQCPKACENFLALCAS---DYYNGCLFHRNIKGFIVQXXXXXXXXXXXX- 272
+G I I L+ + PK NF+ L + Y G FHR I F++Q
Sbjct: 42 IGRIVIGLFGKTVPKTATNFIELAKKPKGEGYPGSKFHRVIADFMIQGGDFTRGDGTGGR 101
Query: 273 SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYGRVIDG 452
SI+G KF DE +LKH G +SMAN G +TNGSQFFIT + P LD ++ ++G++++G
Sbjct: 102 SIYGEKFADE-NFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEG 160
>U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin
isoform 5 protein.
Length = 204
Score = 81.4 bits (192), Expect = 3e-16
Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 4/120 (3%)
Frame = +3
Query: 105 VGDIKIELYCEQCPKACENFLALCAS---DYYNGCLFHRNIKGFIVQXXXXXXXXXXXX- 272
+G I I L+ + PK NF+ L + Y G FHR I F++Q
Sbjct: 42 IGRIVIGLFGKTVPKTATNFIELAKKPKGEGYPGSKFHRVIADFMIQGGDFTRGDGTGGR 101
Query: 273 SIWGRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQPHLDLKYTIYGRVIDG 452
SI+G KF DE +LKH G +SMAN G +TNGSQFFIT + P LD ++ ++G++++G
Sbjct: 102 SIYGEKFADE-NFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEG 160
>U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical
protein T22F3.12 protein.
Length = 174
Score = 74.9 bits (176), Expect = 2e-14
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Frame = +3
Query: 105 VGDIKIELYCEQCPKACENFLALCASD---YYNGCLFHRNIKGFIV---QXXXXXXXXXX 266
+G + EL E+CPK CENF+ LC Y C+F+R I F
Sbjct: 16 LGKLVFELNTEKCPKTCENFVKLCTGPPGFGYKNCVFYRVIPTFCACSGDFETQNARRDG 75
Query: 267 XXSIWGRKFEDEIKDELKHNARGVVSMANNG-PNTNGSQFFITYGEQPHLDLKYTIYGRV 443
S +G K+ D+ E+ H+ +G++ M N G NTN S+F++T+ E P ++ + +G +
Sbjct: 76 GKSTFGTKYFDDENFEILHDKKGILGMDNYGWENTNSSRFYVTFRETPWMNRFHVAFGEL 135
Query: 444 IDG 452
++G
Sbjct: 136 VEG 138
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 60.1 bits (139), Expect = 7e-10
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +3
Query: 282 GRKFEDEIKDELKHNARGVVSMANNGPNTNGSQFFITYGEQ-PHLDLKYTIYGRVIDG 452
GR FE E +++H G+VS NNG N GSQFFIT GE +LD ++TI+G+V +G
Sbjct: 6 GRYFEREDLPKMRHTRMGIVSFVNNGDNMLGSQFFITLGENLDYLDDQHTIFGQVTEG 63
>Z81095-1|CAB03158.1| 667|Caenorhabditis elegans Hypothetical
protein F59F4.1 protein.
Length = 667
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 306 KDELKHNARGVVSMANNGPNTNGSQFF 386
++ + +NAR VV+M NN +GS FF
Sbjct: 66 EERILNNARKVVAMTNNTDQIDGSDFF 92
>Z78414-3|CAD60425.1| 309|Caenorhabditis elegans Hypothetical
protein W09D12.3 protein.
Length = 309
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 36 YLLCKIVLISYNLETMAVTLHTD-VGDIKIELYCEQ 140
Y++C + ++T+AVT +D VG I L C Q
Sbjct: 238 YVICPFRTVIMKIQTIAVTFTSDMVGYTNINLICPQ 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,291,496
Number of Sequences: 27780
Number of extensions: 199709
Number of successful extensions: 574
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -