Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27m05
         (452 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   1.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   3.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   4.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   4.7  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   8.3  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   8.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.3  

>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 201 NNHYSNHLHIELENSHTLS 145
           NNHY++H H+      TL+
Sbjct: 120 NNHYTSHQHLRTHLRGTLT 138


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 75  ETMAVTLHTDVGDIKIELYCEQC 143
           E  A + HTD+G+ +   + +QC
Sbjct: 788 EYYAASFHTDIGNSQSLAHQDQC 810


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 420  KYTIYGRVIDG 452
            KY +Y RV+DG
Sbjct: 1246 KYNLYTRVVDG 1256


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 420  KYTIYGRVIDG 452
            KY +Y RV+DG
Sbjct: 1242 KYNLYTRVVDG 1252


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 272 RTAFPSSRGITSLYYKSLYI 213
           R  FP+S G+ ++ Y  +Y+
Sbjct: 473 RIVFPASFGLLNICYWVIYV 492


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 122 NLDISDVCVQSNCHC 78
           N+D+ D  VQ  C C
Sbjct: 51  NIDVEDKKVQLYCEC 65


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 201 NNHYSNHLHIELENSHTLSDIARNIIQ 121
           N  Y+N + I  E    ++ + +NIIQ
Sbjct: 338 NELYANLMKIVHEKQQEITGLIQNIIQ 364


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 201 NNHYSNHLHIELENSHTLSDIARNIIQ 121
           N  Y+N + I  E    ++ + +NIIQ
Sbjct: 376 NELYANLMKIVHEKQQEITGLIQNIIQ 402


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,183
Number of Sequences: 438
Number of extensions: 2875
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)