Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27l17
(412 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 178 5e-45
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 178 7e-45
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 178 7e-45
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 178 7e-45
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 178 7e-45
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 178 7e-45
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 178 7e-45
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 178 7e-45
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 178 7e-45
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 178 7e-45
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 178 7e-45
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 178 7e-45
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 178 7e-45
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 178 7e-45
M13149-1|AAA52694.1| 525|Homo sapiens HRG protein. 33 0.37
BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich glycopro... 33 0.37
AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich glycopro... 33 0.37
AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacti... 31 1.5
AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase pro... 31 2.0
AF013956-1|AAB80718.1| 558|Homo sapiens Polycomb 2 homolog prot... 29 4.5
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 178 bits (434), Expect = 5e-45
Identities = 83/107 (77%), Positives = 93/107 (86%)
Frame = +2
Query: 92 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 271
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 272 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 412
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 73 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 119
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 178 bits (433), Expect = 7e-45
Identities = 83/106 (78%), Positives = 92/106 (86%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 412
HQT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 60 HQTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 105
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 178 bits (433), Expect = 7e-45
Identities = 83/106 (78%), Positives = 92/106 (86%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 412
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 105
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 178 bits (433), Expect = 7e-45
Identities = 83/106 (78%), Positives = 92/106 (86%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 412
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 105
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 178 bits (433), Expect = 7e-45
Identities = 83/106 (78%), Positives = 92/106 (86%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 412
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 105
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 178 bits (433), Expect = 7e-45
Identities = 83/106 (78%), Positives = 92/106 (86%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 412
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 105
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 178 bits (433), Expect = 7e-45
Identities = 83/106 (78%), Positives = 92/106 (86%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 412
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 105
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 178 bits (433), Expect = 7e-45
Identities = 83/106 (78%), Positives = 92/106 (86%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 412
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 105
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 178 bits (433), Expect = 7e-45
Identities = 83/106 (78%), Positives = 92/106 (86%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 412
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 105
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 178 bits (433), Expect = 7e-45
Identities = 83/106 (78%), Positives = 92/106 (86%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 412
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 105
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 178 bits (433), Expect = 7e-45
Identities = 83/106 (78%), Positives = 92/106 (86%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 412
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 105
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 178 bits (433), Expect = 7e-45
Identities = 83/106 (78%), Positives = 92/106 (86%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 412
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 105
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 178 bits (433), Expect = 7e-45
Identities = 83/106 (78%), Positives = 92/106 (86%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 412
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 105
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 178 bits (433), Expect = 7e-45
Identities = 83/106 (78%), Positives = 92/106 (86%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 412
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 105
>M13149-1|AAA52694.1| 525|Homo sapiens HRG protein.
Length = 525
Score = 33.1 bits (72), Expect = 0.37
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -3
Query: 392 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVRYPMIRHWFGDQPPC 261
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -3
Query: 389 HDTCYRRHPD--RTYEYHHHGHAEFGRQ-HVRYPMIRHWFGDQPPC 261
HDT +R+HP + +H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
>BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 33.1 bits (72), Expect = 0.37
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -3
Query: 392 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVRYPMIRHWFGDQPPC 261
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -3
Query: 389 HDTCYRRHPD--RTYEYHHHGHAEFGRQ-HVRYPMIRHWFGDQPPC 261
HDT +R+HP + +H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
>AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 33.1 bits (72), Expect = 0.37
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -3
Query: 392 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVRYPMIRHWFGDQPPC 261
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -3
Query: 389 HDTCYRRHPD--RTYEYHHHGHAEFGRQ-HVRYPMIRHWFGDQPPC 261
HDT +R+HP + +H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
>AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacting
protein protein.
Length = 250
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 91 ESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTS 198
E SP +G+F RD +GCS P++ A S
Sbjct: 54 EPSASPAAGLGIFEVRRDASGCSMLAPLQTGAARFS 89
>AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase
protein.
Length = 1907
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 224 SMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARI-PRVRGGGTHRSGQGAFGNMCRGGR 397
++++ +RQP + AG A +W TG A A P V GG S + GGR
Sbjct: 160 AINRGARQPRAGAAAAGRGPGAGAWRTGEAAASAGPAVGEGGAMGSRRAPTRGWGAGGR 218
>AF013956-1|AAB80718.1| 558|Homo sapiens Polycomb 2 homolog
protein.
Length = 558
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Frame = -3
Query: 410 WGRTYVHHDTCYRRHPDRTYEYHHHGH----AEFGRQHVRYPMIRHWFGDQPPC 261
W H + HP + +HHH H HVR + G++ PC
Sbjct: 369 WDPARNTHPPSHHPHPHPHHHHHHHHHHHHAVGLNLSHVRKRCLSETHGEREPC 422
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,162,787
Number of Sequences: 237096
Number of extensions: 1469711
Number of successful extensions: 3646
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3597
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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