Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27l14
         (443 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004481-1|AAO42645.1|  771|Drosophila melanogaster LD34250p pro...    30   1.6  
AE014298-1948|AAF48305.1|  789|Drosophila melanogaster CG9941-PA...    30   1.6  

>BT004481-1|AAO42645.1|  771|Drosophila melanogaster LD34250p
           protein.
          Length = 771

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +1

Query: 88  ISKLLHKSFNNVHSVISEGFCDNIMNILLFIEYSLPDLFD*KKKHNGSTNRTQPQHYCS 264
           + K LHK   +V +++  G    ++++      SLPD+ D     N ++ R+    Y S
Sbjct: 680 VKKNLHKKSTSVGNMVGSGSVTTVVDLKSNNVSSLPDMLDSPISGNSASTRSSSDSYSS 738


>AE014298-1948|AAF48305.1|  789|Drosophila melanogaster CG9941-PA
           protein.
          Length = 789

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +1

Query: 88  ISKLLHKSFNNVHSVISEGFCDNIMNILLFIEYSLPDLFD*KKKHNGSTNRTQPQHYCS 264
           + K LHK   +V +++  G    ++++      SLPD+ D     N ++ R+    Y S
Sbjct: 698 VKKNLHKKSTSVGNMVGSGSVTTVVDLKSNNVSSLPDMLDSPISGNSASTRSSSDSYSS 756


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,432,263
Number of Sequences: 53049
Number of extensions: 261778
Number of successful extensions: 518
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)