Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27l14
         (443 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21317-5|AAA62526.2|  895|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AL132863-7|CAJ80822.1|  231|Caenorhabditis elegans Hypothetical ...    27   8.1  

>U21317-5|AAA62526.2|  895|Caenorhabditis elegans Hypothetical
           protein B0495.7 protein.
          Length = 895

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 313 CFS*KI*SRSRLCYHEVNNSVV 248
           CF  K  S   LCYH++ N VV
Sbjct: 135 CFDLKFLSSFTLCYHKITNVVV 156


>AL132863-7|CAJ80822.1|  231|Caenorhabditis elegans Hypothetical
           protein Y37H2A.12 protein.
          Length = 231

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 136 SEGFCDNIMNILLFIEYSLPDLFD*KKKHNGSTNRTQPQHY 258
           SE F D ++N+L     ++  +FD   +HNG+      Q+Y
Sbjct: 172 SECFEDGLINVLTCDPAAIGKVFDPNYEHNGANEIVFEQNY 212


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,541,752
Number of Sequences: 27780
Number of extensions: 154906
Number of successful extensions: 292
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)