Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27l12
         (458 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2330|AAF53285.1|  803|Drosophila melanogaster CG9395-PA...    41   0.001
BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p pro...    29   3.0  
BT029104-1|ABJ17037.1|  595|Drosophila melanogaster IP14602p pro...    29   4.0  
AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-P...    29   4.0  
AE014297-2908|AAF55834.2| 4496|Drosophila melanogaster CG3723-PA...    27   9.2  

>AE014134-2330|AAF53285.1|  803|Drosophila melanogaster CG9395-PA
           protein.
          Length = 803

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 303 PIDAVWQPVAGTXFRFYVYSAYVE-XXXXXXXXXXXXXXXXGADPVICRLW 452
           PID  WQ V GT F+F+VYSAY +                 G + V CR W
Sbjct: 242 PIDGAWQVVNGTRFKFFVYSAYFDRREGARLVRVVGATKTRGPERVWCRFW 292


>BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p
           protein.
          Length = 1286

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -2

Query: 187 SNNSVSTMTPNTAKNMMKMKKLILARSLAREDIARALHFIV 65
           S  SV T++PNTAK +++++K   A  LA   + R  +  +
Sbjct: 151 SVTSVDTLSPNTAKAVLELQKRCRADKLACLSLTRVTYLSI 191


>BT029104-1|ABJ17037.1|  595|Drosophila melanogaster IP14602p
           protein.
          Length = 595

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = +2

Query: 254 NGNGVRGRRATTASEHTH*CSLATSRRYXISVLRLFGLRGTSDGSRGANNRSDKNARSRP 433
           NGNG+ G      S HTH  S ++S    I+     GL  ++  S   NN S+  +  RP
Sbjct: 466 NGNGISGVILENNSHHTHHLSSSSSANLVIN-----GLTSSNSISNN-NNNSNNVSLHRP 519

Query: 434 RHLP 445
           +  P
Sbjct: 520 QLTP 523


>AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-PA,
           isoform A protein.
          Length = 1634

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = +2

Query: 254 NGNGVRGRRATTASEHTH*CSLATSRRYXISVLRLFGLRGTSDGSRGANNRSDKNARSRP 433
           NGNG+ G      S HTH  S ++S    I+     GL  ++  S   NN S+  +  RP
Sbjct: 466 NGNGISGVILENNSHHTHHLSSSSSANLVIN-----GLTSSNSISNN-NNNSNNVSLHRP 519

Query: 434 RHLP 445
           +  P
Sbjct: 520 QLTP 523


>AE014297-2908|AAF55834.2| 4496|Drosophila melanogaster CG3723-PA
            protein.
          Length = 4496

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 401  YSHRGYRPTFHVSRINVKPKXSTGDWL 321
            Y  R   PT +VS +N+K K   G W+
Sbjct: 4460 YKTRTRGPTTYVSNLNLKTKDKPGKWI 4486


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,789,923
Number of Sequences: 53049
Number of extensions: 414765
Number of successful extensions: 1575
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1575
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)