Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27l03
         (543 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            27   0.30 
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          25   2.1  
U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.          23   6.5  
DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.    23   6.5  
AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    23   8.6  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    23   8.6  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 27.5 bits (58), Expect = 0.30
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 113  SIHIFYFIFQLENGAAAYIQATTVVQHKIKSKKN 214
            +IH+ +F+  LEN    +   TTV+ H + ++ N
Sbjct: 933  NIHVRFFMLSLENKPHVFDCYTTVIPHTVLTQYN 966


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 102 WCNTLYIYFISYFSLKMVQRLTFRRRLSYNTKSNQR 209
           W +TL I FIS F+  + + LT+   + Y T+  Q+
Sbjct: 2   WADTLLIVFISIFTALLGEGLTW--VMVYRTEKYQK 35


>U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.
          Length = 140

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 76  TKATTSDLSGVILYTYILFHISA*KWCSGLHSGDDCR 186
           T AT  + +G     Y +F I+   WC   +  +DC+
Sbjct: 57  TSATNKNKNGST--DYGIFQINNKYWCDSGYGSNDCK 91


>DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.
          Length = 140

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 76  TKATTSDLSGVILYTYILFHISA*KWCSGLHSGDDCR 186
           T AT  + +G     Y +F I+   WC   +  +DC+
Sbjct: 57  TSATNKNKNGST--DYGIFQINNKYWCDSGYGSNDCK 91


>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 466 ALRTFTIFCSSIRKALTMRCLTHLWQRTP 380
           ALRT    CS I+K   ++ +T L+   P
Sbjct: 74  ALRTKCARCSPIQKENALKIITRLYYDYP 102


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 466 ALRTFTIFCSSIRKALTMRCLTHLWQRTP 380
           ALRT    CS I+K   ++ +T L+   P
Sbjct: 74  ALRTKCARCSPIQKENALKIITRLYYDYP 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,937
Number of Sequences: 2352
Number of extensions: 10606
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)