Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27l03
         (543 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p pro...   175   2e-44
AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,...   175   2e-44
AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,...   175   2e-44
AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB...   175   4e-44
AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA...   175   4e-44
AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p pro...   171   4e-43
AE014297-3919|AAF56566.1|  201|Drosophila melanogaster CG14551-P...    30   1.8  
AY058275-1|AAL13504.1|  630|Drosophila melanogaster GH02822p pro...    30   2.4  
AE014134-2387|AAF53324.1|  630|Drosophila melanogaster CG7364-PA...    30   2.4  
BT022454-1|AAY54870.1|  135|Drosophila melanogaster IP05788p pro...    28   9.5  
BT022433-1|AAY54849.1|  135|Drosophila melanogaster IP05688p pro...    28   9.5  
AY113610-1|AAM29615.1|  827|Drosophila melanogaster RH61467p pro...    28   9.5  
AE014298-1218|AAF46401.2|  827|Drosophila melanogaster CG12772-P...    28   9.5  
AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA...    28   9.5  

>AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p
           protein.
          Length = 168

 Score =  175 bits (427), Expect = 2e-44
 Identities = 80/104 (76%), Positives = 90/104 (86%)
 Frame = +3

Query: 150 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 329
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL+GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60

Query: 330 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 461
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,
           isoform B protein.
          Length = 168

 Score =  175 bits (427), Expect = 2e-44
 Identities = 80/104 (76%), Positives = 90/104 (86%)
 Frame = +3

Query: 150 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 329
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL+GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60

Query: 330 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 461
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,
           isoform A protein.
          Length = 168

 Score =  175 bits (427), Expect = 2e-44
 Identities = 80/104 (76%), Positives = 90/104 (86%)
 Frame = +3

Query: 150 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 329
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL+GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60

Query: 330 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 461
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB,
           isoform B protein.
          Length = 162

 Score =  175 bits (425), Expect = 4e-44
 Identities = 80/104 (76%), Positives = 89/104 (85%)
 Frame = +3

Query: 150 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 329
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPS 60

Query: 330 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 461
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA,
           isoform A protein.
          Length = 162

 Score =  175 bits (425), Expect = 4e-44
 Identities = 80/104 (76%), Positives = 89/104 (85%)
 Frame = +3

Query: 150 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 329
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPS 60

Query: 330 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 461
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p
           protein.
          Length = 162

 Score =  171 bits (417), Expect = 4e-43
 Identities = 79/104 (75%), Positives = 88/104 (84%)
 Frame = +3

Query: 150 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 329
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL GI  +RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITASRPS 60

Query: 330 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 461
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-3919|AAF56566.1|  201|Drosophila melanogaster CG14551-PA
           protein.
          Length = 201

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +3

Query: 219 RTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLC-YRKKTVKRVYGGVLCH 395
           + P G L+Y  + KP  + RC  C       + A P +R+     RK   ++    V  H
Sbjct: 115 KQPPGPLIYGMLPKPAVVGRCPTCSGNPERTEVAIPEQRTPWAPERKSWNRKTQEQVKPH 174

Query: 396 KC 401
           +C
Sbjct: 175 RC 176


>AY058275-1|AAL13504.1|  630|Drosophila melanogaster GH02822p
           protein.
          Length = 630

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query: 96  FEWCNTLYIYFISYFSLKMVQRLTFRRRLS-YNTKSNQRRIVRTPGGRLVYQYVKKPKKI 272
           F   N+L + F     L M+   T RR ++ YNT  N    +   G +LV+  V +P K 
Sbjct: 269 FSIINSLVVVFFLSGILTMIMIRTLRRDIARYNTDDNIEDTLEETGWKLVHGDVFRPPKN 328

Query: 273 PR 278
            R
Sbjct: 329 TR 330


>AE014134-2387|AAF53324.1|  630|Drosophila melanogaster CG7364-PA
           protein.
          Length = 630

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query: 96  FEWCNTLYIYFISYFSLKMVQRLTFRRRLS-YNTKSNQRRIVRTPGGRLVYQYVKKPKKI 272
           F   N+L + F     L M+   T RR ++ YNT  N    +   G +LV+  V +P K 
Sbjct: 269 FSIINSLVVVFFLSGILTMIMIRTLRRDIARYNTDDNIEDTLEETGWKLVHGDVFRPPKN 328

Query: 273 PR 278
            R
Sbjct: 329 TR 330


>BT022454-1|AAY54870.1|  135|Drosophila melanogaster IP05788p
           protein.
          Length = 135

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/61 (27%), Positives = 32/61 (52%)
 Frame = +3

Query: 177 RLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYRK 356
           +LSY TKSN   +++ P        VK  KK+ +  +CK + R ++  +  ++ +   +K
Sbjct: 80  QLSYITKSNVNSVIKFPA-----MSVKDKKKLNKKNKCK-RTRKVEKKKKKKKKKKKKKK 133

Query: 357 K 359
           K
Sbjct: 134 K 134


>BT022433-1|AAY54849.1|  135|Drosophila melanogaster IP05688p
           protein.
          Length = 135

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/61 (27%), Positives = 32/61 (52%)
 Frame = +3

Query: 177 RLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYRK 356
           +LSY TKSN   +++ P        VK  KK+ +  +CK + R ++  +  ++ +   +K
Sbjct: 80  QLSYITKSNVNSVIKFPA-----MSVKDKKKLNKKNKCK-RTRKVEKKKKKKKKKKKKKK 133

Query: 357 K 359
           K
Sbjct: 134 K 134


>AY113610-1|AAM29615.1|  827|Drosophila melanogaster RH61467p
           protein.
          Length = 827

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 228 GGRLVYQYVKKPKKIPRCGQC 290
           GG L+Y + +K ++  RCG C
Sbjct: 777 GGELIYPWQRKVQRCDRCGAC 797


>AE014298-1218|AAF46401.2|  827|Drosophila melanogaster CG12772-PA
           protein.
          Length = 827

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 228 GGRLVYQYVKKPKKIPRCGQC 290
           GG L+Y + +K ++  RCG C
Sbjct: 777 GGELIYPWQRKVQRCDRCGAC 797


>AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA
           protein.
          Length = 2898

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 312 GYHG-VCSCTDHTLGSSWAF*HTD 244
           GY G +C  +DH  GSSW +  TD
Sbjct: 204 GYSGRLCDLSDHPAGSSWRWLATD 227


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,914,544
Number of Sequences: 53049
Number of extensions: 442376
Number of successful extensions: 983
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)