Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27k15
(415 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 31 0.25
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 31 0.25
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 31 0.25
AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical ... 31 0.44
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 30 0.58
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 30 0.76
Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical pr... 30 0.76
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 30 0.76
AL023828-24|CAD56604.1| 196|Caenorhabditis elegans Hypothetical... 29 1.0
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 29 1.0
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 29 1.3
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 29 1.3
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 28 2.3
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 28 2.3
AC024850-1|AAF60860.2| 404|Caenorhabditis elegans Groundhog (he... 28 2.3
Z93383-6|CAB07623.1| 283|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z81107-1|CAB03225.1| 258|Caenorhabditis elegans Hypothetical pr... 27 4.1
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 27 4.1
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 27 4.1
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 27 4.1
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 27 4.1
AC024875-7|AAK29987.2| 97|Caenorhabditis elegans Knl (kinetoch... 27 4.1
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical p... 27 5.4
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 27 5.4
U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defecti... 27 5.4
U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defecti... 27 5.4
U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defecti... 27 5.4
U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defecti... 27 5.4
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 27 5.4
AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome at... 27 5.4
AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical ... 27 5.4
AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical ... 27 5.4
AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein. 27 5.4
AF098501-7|AAC67402.1| 199|Caenorhabditis elegans Hypothetical ... 27 5.4
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 27 5.4
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 27 7.1
U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like p... 27 7.1
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 27 7.1
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 27 7.1
AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like ... 27 7.1
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 26 9.4
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 26 9.4
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 26 9.4
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 31.5 bits (68), Expect = 0.25
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = -3
Query: 167 LEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFE---RRNSELVAELYTIEMSK 6
LEE K+ E S++NDL+E+L AES+ K ++++ + +++LV L T++++K
Sbjct: 436 LEEKNKEISERDSSINDLKEKL----AESEKKATKYKNELKEHADLVENL-TLQLNK 487
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.25
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = -3
Query: 167 LEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFE---RRNSELVAELYTIEMSK 6
LEE K+ E S++NDL+E+L AES+ K ++++ + +++LV L T++++K
Sbjct: 438 LEEKNKEISERDSSINDLKEKL----AESEKKATKYKNELKEHADLVENL-TLQLNK 489
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.25
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = -3
Query: 167 LEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFE---RRNSELVAELYTIEMSK 6
LEE K+ E S++NDL+E+L AES+ K ++++ + +++LV L T++++K
Sbjct: 438 LEEKNKEISERDSSINDLKEKL----AESEKKATKYKNELKEHADLVENL-TLQLNK 489
>AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical
protein Y43F4B.6 protein.
Length = 1083
Score = 30.7 bits (66), Expect = 0.44
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = -3
Query: 191 KLKWANRDLEEFTKKTQ-ELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAEL 27
KL+ R +EE KKT+ EL++ LR+Q AE+ +KF F++++ +A++
Sbjct: 586 KLQETRRRMEETLKKTEDELKNLKTQRLRLLREQRAEA-SKFQAFKQKHEREMAQM 640
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 30.3 bits (65), Expect = 0.58
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -3
Query: 206 KITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFER 54
K T ++K N+ L++ ++ ++ QS V + +LRK +AE+ K +F+R
Sbjct: 541 KKTIQEVKADNKKLQQILEEVRQNQSKVLEENVKLRKGMAEAIEKIEEFKR 591
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 29.9 bits (64), Expect = 0.76
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = -3
Query: 236 CDYAMLKHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFE 57
CD + +H+ I ++K K +L E +E++S + E+ KQ+ + Q K +
Sbjct: 950 CDENISRHDKDIEKMKKKC--EELMEKAIDDEEVKSK-KETVERFEKQIKKLQTKGEEMT 1006
Query: 56 RRNSELVA 33
++ SEL A
Sbjct: 1007 KKQSELSA 1014
>Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical
protein F59A2.2 protein.
Length = 520
Score = 29.9 bits (64), Expect = 0.76
Identities = 13/50 (26%), Positives = 30/50 (60%)
Frame = -3
Query: 206 KITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFE 57
K++E K + LEE +K E+++ +ND E+L+++ + + + S ++
Sbjct: 368 KLSEAKAQGVKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYK 417
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 29.9 bits (64), Expect = 0.76
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -3
Query: 164 EEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAE 30
++ + + L+ TV+DL+ ++KQ +E QAK Q E+ ++
Sbjct: 951 KKIEQDNEGLKKTVSDLETTIKKQESEKQAKDHQIRSLQDEIQSQ 995
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -3
Query: 170 DLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAEL 27
+ E+F + +E Q D+Q QL K +E Q ++FE EL
Sbjct: 1349 ECEQFRESLEEEQDAKTDVQRQLSKANSEIQQWRAKFEGEGVSRAEEL 1396
>AL023828-24|CAD56604.1| 196|Caenorhabditis elegans Hypothetical
protein Y17G7B.21 protein.
Length = 196
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = -3
Query: 206 KITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVA 33
K+ + K+A R + +L+ + ++ ++++AES+A+ +F+R EL+A
Sbjct: 72 KLFNVGKKYAKRFATSTSSAASKLRLVKLKIDKKYQQRLAESKARVERFQREREELLA 129
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 29.5 bits (63), Expect = 1.0
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = -3
Query: 278 AKNSQVEHKMTMLNCDYAMLKHEHKITELKLKWANRDLEEFTKKTQELQSTV---NDLQE 108
+++ + EH++ M K E ++ LK + AN +++EF K ++L+ V ++ +E
Sbjct: 397 SESLKYEHELVRKMMIEDMEKLEAEVLALKSQQANLEIQEFHDKIKQLELEVQLSSENKE 456
Query: 107 QLRKQVAESQAKFSQFERRNSELV 36
+L+ ++ Q K S+ + E V
Sbjct: 457 KLQAELMVVQEKASENIKNAEEKV 480
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -3
Query: 197 ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSEL 39
E KLK + L ++ K +ELQS +N +++L + AE++ + EL
Sbjct: 278 EKKLKTSQEKLVKYEGKIEELQSRLNKKRKELEEVQAENRKLLEDKNTHDFEL 330
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -3
Query: 197 ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSEL 39
E KLK + L ++ K +ELQS +N +++L + AE++ + EL
Sbjct: 278 EKKLKTSQEKLVKYEGKIEELQSRLNKKRKELEEVQAENRKLLEDKNTHDFEL 330
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = -3
Query: 197 ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLR---KQVAESQAKFSQFERRNSELVAEL 27
E KLK A DL+E ++ +E+ + +L ++L K + +S K ++ ++ ++L E
Sbjct: 821 EHKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQKSAENDKMLTQLREEA 880
Query: 26 YTIE 15
+ E
Sbjct: 881 FAKE 884
Score = 27.9 bits (59), Expect = 3.1
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3
Query: 170 DLEEFTKKTQELQSTVNDLQEQLRKQ--VAESQAKFSQFERRNSELVAELYTIE 15
+LEE K ELQ V L+E+L K+ VA S + ++E+V + IE
Sbjct: 709 ELEELRNKNLELQEQVKQLKEELEKEKSVAGSGNSGGWSDIDDNEVVEAVQPIE 762
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = -3
Query: 197 ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLR---KQVAESQAKFSQFERRNSELVAEL 27
E KLK A DL+E ++ +E+ + +L ++L K + +S K ++ ++ ++L E
Sbjct: 833 EHKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQKSAENDKMLTQLREEA 892
Query: 26 YTIE 15
+ E
Sbjct: 893 FAKE 896
Score = 27.9 bits (59), Expect = 3.1
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3
Query: 170 DLEEFTKKTQELQSTVNDLQEQLRKQ--VAESQAKFSQFERRNSELVAELYTIE 15
+LEE K ELQ V L+E+L K+ VA S + ++E+V + IE
Sbjct: 721 ELEELRNKNLELQEQVKQLKEELEKEKSVAGSGNSGGWSDIDDNEVVEAVQPIE 774
>AC024850-1|AAF60860.2| 404|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 16 protein.
Length = 404
Score = 28.3 bits (60), Expect = 2.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 125 VNDLQEQLRKQVAESQAKFSQFERRNSELVAE 30
VN+ + QL KQ+ E Q KF + E+ + V E
Sbjct: 130 VNEYELQLAKQIEEDQLKFVEDEKNPMKYVVE 161
>Z93383-6|CAB07623.1| 283|Caenorhabditis elegans Hypothetical
protein F54B8.6 protein.
Length = 283
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +1
Query: 109 SCRSFTVDCNSCVFLVNSSKSRFAHFNFNSVILCSC 216
+C F NSC + ++ + HF+ ++ +C C
Sbjct: 156 NCDVFKCTVNSCYYNYYLTQEQIVHFSIGTMTICFC 191
>Z81107-1|CAB03225.1| 258|Caenorhabditis elegans Hypothetical
protein R07H5.1 protein.
Length = 258
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -3
Query: 155 TKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELYTI 18
T++ ++LQS V+DLQ ++ + Q + SE+ LY++
Sbjct: 124 TEEIRQLQSQVDDLQNSIKFIMDSVSQTTQQLATQQSEISRALYSV 169
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = -3
Query: 191 KLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELY 24
+++ R+LE ++ ELQ + +E+ R + + + + ERR +ELVA+++
Sbjct: 464 RIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRREEERREAELVADVH 519
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = -3
Query: 191 KLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELY 24
+++ R+LE ++ ELQ + +E+ R + + + + ERR +ELVA+++
Sbjct: 464 RIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRREEERREAELVADVH 519
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = -3
Query: 191 KLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELY 24
+++ R+LE ++ ELQ + +E+ R + + + + ERR +ELVA+++
Sbjct: 464 RIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRREEERREAELVADVH 519
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = -3
Query: 191 KLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELY 24
+++ R+LE ++ ELQ + +E+ R + + + + ERR +ELVA+++
Sbjct: 464 RIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRREEERREAELVADVH 519
>AC024875-7|AAK29987.2| 97|Caenorhabditis elegans Knl (kinetochore
null) bindingprotein protein 4 protein.
Length = 97
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = -3
Query: 206 KITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLR-KQVAESQAKFSQFERRNSELVAE 30
+I ++ A+R LEE +K + ++ + DLQEQ + K+ A S K +F+ ++ E
Sbjct: 38 QIINKEMDEADRKLEETLEKRKLVEKQLEDLQEQYKVKEFAFSLQK--EFQDELKKVAEE 95
Query: 29 LY 24
++
Sbjct: 96 IF 97
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 27.1 bits (57), Expect = 5.4
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Frame = -3
Query: 218 KHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRK---QVAESQAKFSQFER-- 54
K + K+ E LK A +++E TK+ ++++T+ +E L ++AE+ + ++ +R
Sbjct: 1063 KAKRKV-EGDLKVAQENIDEITKQKHDVETTLKRKEEDLHHTNAKLAENNSIIAKLQRLI 1121
Query: 53 -----RNSELVAEL 27
RN+EL EL
Sbjct: 1122 KELTARNAELEEEL 1135
Score = 26.2 bits (55), Expect = 9.4
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -3
Query: 221 LKHEHKITELKLKWANR--DLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRN 48
L HE I+ L+ + + +L E + Q+L++ + +L++ + ESQ R
Sbjct: 1196 LNHETAISSLRKRHGDSVAELTEQLETLQKLKAKSEAEKSKLQRDLEESQHATDSEVRSR 1255
Query: 47 SELVAELYTIEM 12
+L L TIE+
Sbjct: 1256 QDLEKALKTIEV 1267
>Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 27.1 bits (57), Expect = 5.4
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 191 KLKWANRDLE-EFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAEL 27
K+K DLE E T+ T +N + +L QV E + RN EL AE+
Sbjct: 128 KIKRKTDDLETELTRLTAR-NEVMNQHRIRLLSQVEEQMRMLENIKSRNPELEAEI 182
>Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical
protein C50F4.11 protein.
Length = 679
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = -3
Query: 275 KNSQVEHKMTMLNCDYAMLKHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRK 96
+ + ++ L D+ +K + + KL DLE +K ELQ V L+++
Sbjct: 80 EKESAQRQLVTLREDHERMKQMMQTNQAKLAEKTIDLETNREKMLELQEQVELLKQERDD 139
Query: 95 QVAE 84
+AE
Sbjct: 140 TIAE 143
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 27.1 bits (57), Expect = 5.4
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Frame = -3
Query: 218 KHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRK---QVAESQAKFSQFER-- 54
K + K+ E LK A +++E TK+ ++++T+ +E L ++AE+ + ++ +R
Sbjct: 1063 KAKRKV-EGDLKVAQENIDEITKQKHDVETTLKRKEEDLHHTNAKLAENNSIIAKLQRLI 1121
Query: 53 -----RNSELVAEL 27
RN+EL EL
Sbjct: 1122 KELTARNAELEEEL 1135
Score = 26.2 bits (55), Expect = 9.4
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -3
Query: 221 LKHEHKITELKLKWANR--DLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRN 48
L HE I+ L+ + + +L E + Q+L++ + +L++ + ESQ R
Sbjct: 1196 LNHETAISSLRKRHGDSVAELTEQLETLQKLKAKSEAEKSKLQRDLEESQHATDSEVRSR 1255
Query: 47 SELVAELYTIEM 12
+L L TIE+
Sbjct: 1256 QDLEKALKTIEV 1267
>U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform d protein.
Length = 733
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -3
Query: 194 LKLKWANRDLEE----FTKKTQELQSTVNDLQEQLRK 96
+ LK N LEE TK+ +ELQ + DLQE L K
Sbjct: 530 ITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLK 566
>U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform a protein.
Length = 736
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -3
Query: 194 LKLKWANRDLEE----FTKKTQELQSTVNDLQEQLRK 96
+ LK N LEE TK+ +ELQ + DLQE L K
Sbjct: 533 ITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLK 569
>U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform c protein.
Length = 761
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -3
Query: 194 LKLKWANRDLEE----FTKKTQELQSTVNDLQEQLRK 96
+ LK N LEE TK+ +ELQ + DLQE L K
Sbjct: 533 ITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLK 569
>U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform b protein.
Length = 777
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -3
Query: 194 LKLKWANRDLEE----FTKKTQELQSTVNDLQEQLRK 96
+ LK N LEE TK+ +ELQ + DLQE L K
Sbjct: 533 ITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLK 569
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 164 EEFTKKTQELQSTVNDLQE 108
++FT KT+EL +TVN L E
Sbjct: 1345 QQFTSKTRELATTVNQLVE 1363
>AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome
attachment protein A protein.
Length = 733
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -3
Query: 194 LKLKWANRDLEE----FTKKTQELQSTVNDLQEQLRK 96
+ LK N LEE TK+ +ELQ + DLQE L K
Sbjct: 530 ITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLK 566
>AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 27.1 bits (57), Expect = 5.4
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 191 KLKWANRDLE-EFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAEL 27
K+K DLE E T+ T +N + +L QV E + RN EL AE+
Sbjct: 128 KIKRKTDDLETELTRLTAR-NEVMNQHRIRLLSQVEEQMRMLENIKSRNPELEAEI 182
>AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical
protein Y68A4A.5 protein.
Length = 572
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +1
Query: 82 DSATCLRNCSCRSFTVDCNSCVFLVNSSKSRF 177
+ ATC N CR T DC + RF
Sbjct: 211 EKATCTANYDCRRMTYDCRRLCHTCSQMPPRF 242
>AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein.
Length = 679
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = -3
Query: 275 KNSQVEHKMTMLNCDYAMLKHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRK 96
+ + ++ L D+ +K + + KL DLE +K ELQ V L+++
Sbjct: 80 EKESAQRQLVTLREDHERMKQMMQTNQAKLAEKTIDLETNREKMLELQEQVELLKQERDD 139
Query: 95 QVAE 84
+AE
Sbjct: 140 TIAE 143
>AF098501-7|AAC67402.1| 199|Caenorhabditis elegans Hypothetical
protein H28G03.3 protein.
Length = 199
Score = 27.1 bits (57), Expect = 5.4
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = -3
Query: 269 SQVEHKMTMLNCDYAMLKHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQL 102
S VE++ +Y L+ EH + +K +R++E K + L+ +++EQ+
Sbjct: 97 STVEYEQMKNKNEY--LQREHAEMQKSIKRKDREIERLRSKNRRLEEEGRNIREQM 150
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 164 EEFTKKTQELQSTVNDLQE 108
++FT KT+EL +TVN L E
Sbjct: 1345 QQFTSKTRELATTVNQLVE 1363
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 26.6 bits (56), Expect = 7.1
Identities = 9/47 (19%), Positives = 26/47 (55%)
Frame = -3
Query: 218 KHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQ 78
+ E ++ + ++ A DL+ +K E + + + ++ +RK+ +E +
Sbjct: 316 RDEVEVQDAEIAEAREDLDAKKRKVLEFEEKIRECEQSIRKKTSEKK 362
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
protein T06E4.1 protein.
Length = 1295
Score = 26.6 bits (56), Expect = 7.1
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -3
Query: 194 LKLKWANRDLEEFTKKTQELQSTVNDLQEQLRK---QVAESQAKFSQFERRNSELVAELY 24
LK+ +E++ KK ELQ + EQL+K + Q K+ + E ++ V
Sbjct: 331 LKVDVMQHSIEDYEKKFVELQEMKEEADEQLQKAKEDIETLQMKYVELETTINKEVFSNS 390
Query: 23 TIEMSK 6
IE K
Sbjct: 391 EIETLK 396
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 26.6 bits (56), Expect = 7.1
Identities = 9/47 (19%), Positives = 26/47 (55%)
Frame = -3
Query: 218 KHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQ 78
+ E ++ + ++ A DL+ +K E + + + ++ +RK+ +E +
Sbjct: 316 RDEVEVQDAEIAEAREDLDAKKRKVLEFEEKIRECEQSIRKKTSEKK 362
>U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like
protein protein 6 protein.
Length = 928
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -3
Query: 122 NDLQEQLRKQVAESQAKFSQFERRNSELVAE 30
N+ E+LR+Q+AE+Q + + E+ + +AE
Sbjct: 397 NEEIEKLRRQLAENQKEMEEMEKSWQQKIAE 427
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 278 AKNSQVEHKMTMLNCDYAMLKHEHKITELKLKWANRDLEEF 156
A ++ M LN D +++ +HK + ++ A+ +L E+
Sbjct: 393 AWRDKMSENMKQLNADLVVIEKQHKTVKDQISLASEELHEY 433
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -3
Query: 197 ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSE 42
EL+ + + LEE+ K+ QE+ ++++Q Q E Q FE+R E
Sbjct: 199 ELQQQRHKQQLEEYEKRNQEILRREEEIKQQ--NQEREKQIN-DDFEKRKQE 247
>AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like
protein KLP-6 protein.
Length = 928
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -3
Query: 122 NDLQEQLRKQVAESQAKFSQFERRNSELVAE 30
N+ E+LR+Q+AE+Q + + E+ + +AE
Sbjct: 397 NEEIEKLRRQLAENQKEMEEMEKSWQQKIAE 427
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 26.2 bits (55), Expect = 9.4
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -3
Query: 350 NTVNNRIIDLND-VXXXXXXXXXXRAKNSQVEHKMTMLNCDYAMLKHEHKITELKLKWAN 174
N + N++ DLN V +A+N+ + ++ L+H +L+ A
Sbjct: 184 NELANKVEDLNKHVNDLAQQRQRLQAENNDLLKEVHDQKVQLDNLQHVKYTLAQQLEEAR 243
Query: 173 RDLEEFTKKTQELQSTVNDLQEQL 102
R LE+ ++ +LQS ++ +Q +L
Sbjct: 244 RRLEDAERERSQLQSQLHQVQLEL 267
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 26.2 bits (55), Expect = 9.4
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -3
Query: 350 NTVNNRIIDLND-VXXXXXXXXXXRAKNSQVEHKMTMLNCDYAMLKHEHKITELKLKWAN 174
N + N++ DLN V +A+N+ + ++ L+H +L+ A
Sbjct: 184 NELANKVEDLNKHVNDLAQQRQRLQAENNDLLKEVHDQKVQLDNLQHVKYTLAQQLEEAR 243
Query: 173 RDLEEFTKKTQELQSTVNDLQEQL 102
R LE+ ++ +LQS ++ +Q +L
Sbjct: 244 RRLEDAERERSQLQSQLHQVQLEL 267
>Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical
protein K07C5.3 protein.
Length = 493
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -3
Query: 215 HEHKITELKLKWANRDLEEFTKKTQELQ 132
HE K+T K KW+ + L+ + +K +++
Sbjct: 258 HEKKVTNEKGKWSLQKLDRYLEKLSKIE 285
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = +3
Query: 222 HSVVAV*HSHFMFNLAVLGSQLGPFSFQSLHIV*VYNAIVDRVIF*KLTPMLFD 383
HS+ H+ FN+ V S+ S+ +H+ + N ++D + ++ M D
Sbjct: 3481 HSITQGLHT---FNVTVTDSKFNTVSYVEVHVTSIDNDVIDHAVSIRIRSMSVD 3531
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = +3
Query: 222 HSVVAV*HSHFMFNLAVLGSQLGPFSFQSLHIV*VYNAIVDRVIF*KLTPMLFD 383
HS+ H+ FN+ V S+ S+ +H+ + N ++D + ++ M D
Sbjct: 3481 HSITQGLHT---FNVTVTDSKFNTVSYVEVHVTSIDNDVIDHAVSIRIRSMSVD 3531
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = +3
Query: 222 HSVVAV*HSHFMFNLAVLGSQLGPFSFQSLHIV*VYNAIVDRVIF*KLTPMLFD 383
HS+ H+ FN+ V S+ S+ +H+ + N ++D + ++ M D
Sbjct: 3481 HSITQGLHT---FNVTVTDSKFNTVSYVEVHVTSIDNDVIDHAVSIRIRSMSVD 3531
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 26.2 bits (55), Expect = 9.4
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -3
Query: 350 NTVNNRIIDLND-VXXXXXXXXXXRAKNSQVEHKMTMLNCDYAMLKHEHKITELKLKWAN 174
N + N++ DLN V +A+N+ + ++ L+H +L+ A
Sbjct: 200 NELANKVEDLNKHVNDLAQQRQRLQAENNDLLKEVHDQKVQLDNLQHVKYTLAQQLEEAR 259
Query: 173 RDLEEFTKKTQELQSTVNDLQEQL 102
R LE+ ++ +LQS ++ +Q +L
Sbjct: 260 RRLEDAERERSQLQSQLHQVQLEL 283
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 185 KWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAK 72
+ ++ +LE+ + ELQ ++ QLR++V + QAK
Sbjct: 351 RMSSMELEKLFRFKSELQLNLSKKVSQLRQKVGDKQAK 388
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,324,349
Number of Sequences: 27780
Number of extensions: 144851
Number of successful extensions: 695
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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