Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27k07
(486 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209780-1|BAD93017.1| 730|Homo sapiens Kinesin-like protein KI... 45 1e-04
BC045542-1|AAH45542.1| 702|Homo sapiens KIF3A protein protein. 40 0.005
BC039592-1|AAH39592.1| 408|Homo sapiens Unknown (protein for IM... 40 0.005
BC032599-1|AAH32599.1| 408|Homo sapiens KIF3A protein protein. 40 0.005
AM177178-1|CAJ45482.1| 725|Homo sapiens kinesin-like protein KI... 40 0.005
AF041853-1|AAC72294.1| 702|Homo sapiens kinesin family member p... 40 0.005
AC004237-1|AAC04475.1| 402|Homo sapiens KIF3 protein. 40 0.006
AL121897-5|CAC16425.1| 747|Homo sapiens kinesin family member 3... 36 0.057
AB002357-1|BAA20815.2| 760|Homo sapiens KIAA0359 protein. 36 0.057
BX571741-1|CAE11867.1| 793|Homo sapiens hypothetical protein pr... 36 0.076
BC132783-1|AAI32784.1| 793|Homo sapiens kinesin family member 3... 36 0.076
BC130423-1|AAI30424.1| 793|Homo sapiens kinesin family member 3... 36 0.076
BC092406-1|AAH92406.1| 793|Homo sapiens kinesin family member 3... 36 0.076
BC042486-1|AAH42486.1| 792|Homo sapiens KIF3C protein protein. 36 0.076
AJ002223-1|CAA05252.1| 515|Homo sapiens KIF3C protein. 36 0.076
AF035621-1|AAC39562.1| 793|Homo sapiens kinesin-related protein... 36 0.076
AF018164-1|AAC05302.1| 792|Homo sapiens kinesin-like protein 3C... 36 0.076
AC013449-1|AAY24261.1| 705|Homo sapiens unknown protein. 36 0.076
AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with holl... 32 0.93
BX248133-9|CAM26111.1| 891|Homo sapiens chromosome 6 open readi... 31 1.6
BA000025-13|BAB63304.1| 852|Homo sapiens G7C protein. 31 1.6
AL662899-45|CAI18431.2| 891|Homo sapiens chromosome 6 open read... 31 1.6
AL662834-10|CAI17731.2| 891|Homo sapiens chromosome 6 open read... 31 1.6
AF134726-11|AAD21820.1| 852|Homo sapiens NG37 protein. 31 1.6
BC104658-1|AAI04659.1| 233|Homo sapiens LOC389833 protein protein. 31 2.2
BC104023-1|AAI04024.1| 403|Homo sapiens TSGA10IP protein protein. 31 2.2
BC104022-1|AAI04023.1| 556|Homo sapiens testis specific, 10 int... 31 2.2
AK057442-1|BAB71488.1| 556|Homo sapiens protein ( Homo sapiens ... 31 2.2
AL834139-1|CAD38854.1| 1340|Homo sapiens hypothetical protein pr... 30 5.0
U31089-1|AAA75446.1| 390|Homo sapiens Abl binding protein 3 pro... 29 6.6
BC067773-1|AAH67773.1| 434|Homo sapiens arginine/serine-rich co... 29 6.6
BC008684-1|AAH08684.2| 434|Homo sapiens arginine/serine-rich co... 29 6.6
AB212664-1|BAE93762.1| 434|Homo sapiens hypothetical protein pr... 29 6.6
X16455-1|CAA34474.1| 697|Homo sapiens pCEA80-11 protein (647 AA... 29 8.7
BC105598-1|AAI05599.1| 259|Homo sapiens DDX46 protein protein. 29 8.7
BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 29 8.7
AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein. 29 8.7
AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein. 29 8.7
AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein. 29 8.7
>AB209780-1|BAD93017.1| 730|Homo sapiens Kinesin-like protein KIF3A
variant protein.
Length = 730
Score = 45.2 bits (102), Expect = 1e-04
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 120 ASESTKMPDAELSAP-TVENXXXXXXXXPMDQREKMDGSYNCVSVDSVNGTVAVTRNNVT 296
A E KMP + P + +N P+++REK VSVD + GT+ V + + +
Sbjct: 23 AREGAKMPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTD-S 81
Query: 297 PPEPPRVYAYDAVFDSNTSQ 356
EPP+ + +D VF + Q
Sbjct: 82 SNEPPKTFTFDTVFGPESKQ 101
>BC045542-1|AAH45542.1| 702|Homo sapiens KIF3A protein protein.
Length = 702
Score = 39.9 bits (89), Expect = 0.005
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 138 MPDAELSAP-TVENXXXXXXXXPMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPR 314
MP + P + +N P+++REK VSVD + GT+ V + + + EPP+
Sbjct: 1 MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTD-SSNEPPK 59
Query: 315 VYAYDAVFDSNTSQ 356
+ +D VF + Q
Sbjct: 60 TFTFDTVFGPESKQ 73
>BC039592-1|AAH39592.1| 408|Homo sapiens Unknown (protein for
IMAGE:5403936) protein.
Length = 408
Score = 39.9 bits (89), Expect = 0.005
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 138 MPDAELSAP-TVENXXXXXXXXPMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPR 314
MP + P + +N P+++REK VSVD + GT+ V + + + EPP+
Sbjct: 1 MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTD-SSNEPPK 59
Query: 315 VYAYDAVFDSNTSQ 356
+ +D VF + Q
Sbjct: 60 TFTFDTVFGPESKQ 73
>BC032599-1|AAH32599.1| 408|Homo sapiens KIF3A protein protein.
Length = 408
Score = 39.9 bits (89), Expect = 0.005
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 138 MPDAELSAP-TVENXXXXXXXXPMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPR 314
MP + P + +N P+++REK VSVD + GT+ V + + + EPP+
Sbjct: 1 MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTD-SSNEPPK 59
Query: 315 VYAYDAVFDSNTSQ 356
+ +D VF + Q
Sbjct: 60 TFTFDTVFGPESKQ 73
>AM177178-1|CAJ45482.1| 725|Homo sapiens kinesin-like protein
KIF3Abeta protein.
Length = 725
Score = 39.9 bits (89), Expect = 0.005
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 138 MPDAELSAP-TVENXXXXXXXXPMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPR 314
MP + P + +N P+++REK VSVD + GT+ V + + + EPP+
Sbjct: 1 MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTD-SSNEPPK 59
Query: 315 VYAYDAVFDSNTSQ 356
+ +D VF + Q
Sbjct: 60 TFTFDTVFGPESKQ 73
>AF041853-1|AAC72294.1| 702|Homo sapiens kinesin family member
protein KIF3A protein.
Length = 702
Score = 39.9 bits (89), Expect = 0.005
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 138 MPDAELSAP-TVENXXXXXXXXPMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPR 314
MP + P + +N P+++REK VSVD + GT+ V + + + EPP+
Sbjct: 1 MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTD-SSNEPPK 59
Query: 315 VYAYDAVFDSNTSQ 356
+ +D VF + Q
Sbjct: 60 TFTFDTVFGPESKQ 73
>AC004237-1|AAC04475.1| 402|Homo sapiens KIF3 protein.
Length = 402
Score = 39.5 bits (88), Expect = 0.006
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 201 PMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQ 356
P+++REK VSVD + GT+ V + + + EPP+ + +D VF + Q
Sbjct: 21 PLNEREKSMCYKQAVSVDEMRGTITVHKTD-SSNEPPKTFTFDTVFGPESKQ 71
>AL121897-5|CAC16425.1| 747|Homo sapiens kinesin family member 3B
protein.
Length = 747
Score = 36.3 bits (80), Expect = 0.057
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +3
Query: 201 PMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQ 356
PM+ +EK V VD G V+V T E P+ + +DAV+D N Q
Sbjct: 18 PMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNAKQ 69
>AB002357-1|BAA20815.2| 760|Homo sapiens KIAA0359 protein.
Length = 760
Score = 36.3 bits (80), Expect = 0.057
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +3
Query: 201 PMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQ 356
PM+ +EK V VD G V+V T E P+ + +DAV+D N Q
Sbjct: 31 PMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNAKQ 82
>BX571741-1|CAE11867.1| 793|Homo sapiens hypothetical protein
protein.
Length = 793
Score = 35.9 bits (79), Expect = 0.076
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 201 PMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQ 356
P+ ++E+ G +++D G V + P E P+ + +DAV+D+++ Q
Sbjct: 19 PLSRKEEAAGHEQILTMDVKLGQVTLRNPRAAPGELPKAFTFDAVYDASSKQ 70
>BC132783-1|AAI32784.1| 793|Homo sapiens kinesin family member 3C
protein.
Length = 793
Score = 35.9 bits (79), Expect = 0.076
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 201 PMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQ 356
P+ ++E+ G +++D G V + P E P+ + +DAV+D+++ Q
Sbjct: 19 PLSRKEEAAGHEQILTMDVKLGQVTLRNPRAAPGELPKTFTFDAVYDASSKQ 70
>BC130423-1|AAI30424.1| 793|Homo sapiens kinesin family member 3C
protein.
Length = 793
Score = 35.9 bits (79), Expect = 0.076
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 201 PMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQ 356
P+ ++E+ G +++D G V + P E P+ + +DAV+D+++ Q
Sbjct: 19 PLSRKEEAAGHEQILTMDVKLGQVTLRNPRAAPGELPKTFTFDAVYDASSKQ 70
>BC092406-1|AAH92406.1| 793|Homo sapiens kinesin family member 3C
protein.
Length = 793
Score = 35.9 bits (79), Expect = 0.076
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 201 PMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQ 356
P+ ++E+ G +++D G V + P E P+ + +DAV+D+++ Q
Sbjct: 19 PLSRKEEAAGHEQILTMDVKLGQVTLRNPRAAPGELPKTFTFDAVYDASSKQ 70
>BC042486-1|AAH42486.1| 792|Homo sapiens KIF3C protein protein.
Length = 792
Score = 35.9 bits (79), Expect = 0.076
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 201 PMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQ 356
P+ ++E+ G +++D G V + P E P+ + +DAV+D+++ Q
Sbjct: 19 PLSRKEEAAGHEQILTMDVKLGQVTLRNPRAAPGELPKTFTFDAVYDASSKQ 70
>AJ002223-1|CAA05252.1| 515|Homo sapiens KIF3C protein.
Length = 515
Score = 35.9 bits (79), Expect = 0.076
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 201 PMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQ 356
P+ ++E+ G +++D G V + P E P+ + +DAV+D+++ Q
Sbjct: 19 PLSRKEEAAGHEQILTMDVKLGQVTLRNPRAAPGELPKTFTFDAVYDASSKQ 70
>AF035621-1|AAC39562.1| 793|Homo sapiens kinesin-related protein
protein.
Length = 793
Score = 35.9 bits (79), Expect = 0.076
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 201 PMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQ 356
P+ ++E+ G +++D G V + P E P+ + +DAV+D+++ Q
Sbjct: 19 PLSRKEEAAGHEQILTMDVKLGQVTLRNPRAAPGELPKTFTFDAVYDASSKQ 70
>AF018164-1|AAC05302.1| 792|Homo sapiens kinesin-like protein 3C
protein.
Length = 792
Score = 35.9 bits (79), Expect = 0.076
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 201 PMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQ 356
P+ ++E+ G +++D G V + P E P+ + +DAV+D+++ Q
Sbjct: 19 PLSRKEEAAGHEQILTMDVKLGQVTLRNPRAAPGELPKTFTFDAVYDASSKQ 70
>AC013449-1|AAY24261.1| 705|Homo sapiens unknown protein.
Length = 705
Score = 35.9 bits (79), Expect = 0.076
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 201 PMDQREKMDGSYNCVSVDSVNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQ 356
P+ ++E+ G +++D G V + P E P+ + +DAV+D+++ Q
Sbjct: 19 PLSRKEEAAGHEQILTMDVKLGQVTLRNPRAAPGELPKTFTFDAVYDASSKQ 70
>AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with
holliday junction DNA helicase RUVB like protein.
Length = 1184
Score = 32.3 bits (70), Expect = 0.93
Identities = 35/96 (36%), Positives = 42/96 (43%), Gaps = 14/96 (14%)
Frame = -1
Query: 462 LIPFRYILV-SAVIAVPSIRAP---KARDPNSSAI----RFQEADWC*SRRQHRKRKREA 307
L+P R + AV S RAP + RDP SSA RF+ A R Q R R A
Sbjct: 55 LLPGRAVQAPDAVPGAGSSRAPARWRPRDPGSSAPDAWQRFRPAPL---RAQPRPPPRPA 111
Query: 306 A----PEASHCS--WSQPQSRSRNLRTRNCRSRPFS 217
P C W PQ R+R LR+RN P +
Sbjct: 112 PGPPPPRKGGCGGQWRAPQDRTRGLRSRNSPRPPLA 147
>BX248133-9|CAM26111.1| 891|Homo sapiens chromosome 6 open reading
frame 27 protein.
Length = 891
Score = 31.5 bits (68), Expect = 1.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 297 PPEPPRVYAYDAVFDSNTSQPPENELQKNS 386
PP+PP ++ FD ++SQPP + K+S
Sbjct: 236 PPKPPGKCSHGGHFDRSSSQPPRGGINKDS 265
>BA000025-13|BAB63304.1| 852|Homo sapiens G7C protein.
Length = 852
Score = 31.5 bits (68), Expect = 1.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 297 PPEPPRVYAYDAVFDSNTSQPPENELQKNS 386
PP+PP ++ FD ++SQPP + K+S
Sbjct: 236 PPKPPGKCSHGGHFDRSSSQPPRGGINKDS 265
>AL662899-45|CAI18431.2| 891|Homo sapiens chromosome 6 open reading
frame 27 protein.
Length = 891
Score = 31.5 bits (68), Expect = 1.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 297 PPEPPRVYAYDAVFDSNTSQPPENELQKNS 386
PP+PP ++ FD ++SQPP + K+S
Sbjct: 236 PPKPPGKCSHGGHFDRSSSQPPRGGINKDS 265
>AL662834-10|CAI17731.2| 891|Homo sapiens chromosome 6 open reading
frame 27 protein.
Length = 891
Score = 31.5 bits (68), Expect = 1.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 297 PPEPPRVYAYDAVFDSNTSQPPENELQKNS 386
PP+PP ++ FD ++SQPP + K+S
Sbjct: 236 PPKPPGKCSHGGHFDRSSSQPPRGGINKDS 265
>AF134726-11|AAD21820.1| 852|Homo sapiens NG37 protein.
Length = 852
Score = 31.5 bits (68), Expect = 1.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 297 PPEPPRVYAYDAVFDSNTSQPPENELQKNS 386
PP+PP ++ FD ++SQPP + K+S
Sbjct: 236 PPKPPGKCSHGGHFDRSSSQPPRGGINKDS 265
>BC104658-1|AAI04659.1| 233|Homo sapiens LOC389833 protein protein.
Length = 233
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -2
Query: 299 RRHIVP----GHSHSPVHGIYGHAIVGAVHFLPLVHGPHANHHPN 177
RR VP GH H P G Y H ++H P VHGP HP+
Sbjct: 155 RRGAVPLQPRGHPHEPGEGCYRHD-QQSLHRPPEVHGPSYLLHPH 198
>BC104023-1|AAI04024.1| 403|Homo sapiens TSGA10IP protein protein.
Length = 403
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = -1
Query: 456 PFRYILVSAVIAVPSIRAPKARDPNSSAIRFQEADWC*SRRQHRKRKREAAPEASHCSWS 277
PF++ S V ++ P + P A+ + S+RQ R++ PEA C W
Sbjct: 107 PFQWAWESIATDVRAVLQPSSPTPGHQALPMPSSF---SQRQSRRKSTANLPEAHGCCW- 162
Query: 276 QPQSRSRNLRTR 241
++ ++NL+ R
Sbjct: 163 --KTEAQNLKAR 172
>BC104022-1|AAI04023.1| 556|Homo sapiens testis specific, 10
interacting protein protein.
Length = 556
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = -1
Query: 456 PFRYILVSAVIAVPSIRAPKARDPNSSAIRFQEADWC*SRRQHRKRKREAAPEASHCSWS 277
PF++ S V ++ P + P A+ + S+RQ R++ PEA C W
Sbjct: 107 PFQWAWESIATDVRAVLQPSSPTPGHQALPMPSSF---SQRQSRRKSTANLPEAHGCCW- 162
Query: 276 QPQSRSRNLRTR 241
++ ++NL+ R
Sbjct: 163 --KTEAQNLKAR 172
>AK057442-1|BAB71488.1| 556|Homo sapiens protein ( Homo sapiens
cDNA FLJ32880 fis, clone TESTI2004122. ).
Length = 556
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = -1
Query: 456 PFRYILVSAVIAVPSIRAPKARDPNSSAIRFQEADWC*SRRQHRKRKREAAPEASHCSWS 277
PF++ S V ++ P + P A+ + S+RQ R++ PEA C W
Sbjct: 107 PFQWAWESIATDVRAVLQPSSPTPGHQALPMPSSF---SQRQSRRKSTANLPEAHGCCW- 162
Query: 276 QPQSRSRNLRTR 241
++ ++NL+ R
Sbjct: 163 --KTEAQNLKAR 172
>AL834139-1|CAD38854.1| 1340|Homo sapiens hypothetical protein
protein.
Length = 1340
Score = 29.9 bits (64), Expect = 5.0
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 136 KCPTQSSRLRPSRMFGWWFACGPW--TRGRKWTAPTIAC 246
+CP SR SRM WWF PW +R R P ++C
Sbjct: 313 QCPLSWSRWS-SRMTWWWFV-APWWNSRARPGAFPCLSC 349
>U31089-1|AAA75446.1| 390|Homo sapiens Abl binding protein 3
protein.
Length = 390
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 264 GTVAVTRNNV--TPPEPPRVYAYDAVFDSNTSQPPENELQKNSDRVLSEH 407
G VA + N+ TPP PP V + VFD + PP E + + V+ E+
Sbjct: 266 GFVARVQENISDTPPPPPPVE--EPVFDESPPPPPPPEDYEEEEAVVVEY 313
>BC067773-1|AAH67773.1| 434|Homo sapiens arginine/serine-rich
coiled-coil 2 protein.
Length = 434
Score = 29.5 bits (63), Expect = 6.6
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = -1
Query: 399 KARDPNSSAIRFQEADWC*SRRQHRKRKREAAPEASHCSWSQPQSRSRNLRTRNCRSRPF 220
++R+ S R +E SR + RK+ R + E S+ +SRSR+ RSR
Sbjct: 138 RSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTR 197
Query: 219 SPS 211
S S
Sbjct: 198 SRS 200
>BC008684-1|AAH08684.2| 434|Homo sapiens arginine/serine-rich
coiled-coil 2 protein.
Length = 434
Score = 29.5 bits (63), Expect = 6.6
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = -1
Query: 399 KARDPNSSAIRFQEADWC*SRRQHRKRKREAAPEASHCSWSQPQSRSRNLRTRNCRSRPF 220
++R+ S R +E SR + RK+ R + E S+ +SRSR+ RSR
Sbjct: 138 RSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTR 197
Query: 219 SPS 211
S S
Sbjct: 198 SRS 200
>AB212664-1|BAE93762.1| 434|Homo sapiens hypothetical protein
protein.
Length = 434
Score = 29.5 bits (63), Expect = 6.6
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = -1
Query: 399 KARDPNSSAIRFQEADWC*SRRQHRKRKREAAPEASHCSWSQPQSRSRNLRTRNCRSRPF 220
++R+ S R +E SR + RK+ R + E S+ +SRSR+ RSR
Sbjct: 138 RSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTR 197
Query: 219 SPS 211
S S
Sbjct: 198 SRS 200
>X16455-1|CAA34474.1| 697|Homo sapiens pCEA80-11 protein (647 AA)
protein.
Length = 697
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 228 GSYNCVSVDSVNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQPPENE 371
GSY C + +S G T +T EPP+ + SN S P E+E
Sbjct: 291 GSYTCQAHNSDTGLNRTTVTTITVYEPPKPF-----ITSNNSNPVEDE 333
>BC105598-1|AAI05599.1| 259|Homo sapiens DDX46 protein protein.
Length = 259
Score = 29.1 bits (62), Expect = 8.7
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = -1
Query: 408 RAPKARDPNSSAIRFQEADWC*SRRQHRKRKREAAPEASHCSWSQPQSRSRNLRTRNCRS 229
R ++RD + R + D SR + RKR R + S + +SRSR+ R RS
Sbjct: 38 RRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRS 97
Query: 228 R 226
R
Sbjct: 98 R 98
>BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46 protein.
Length = 1031
Score = 29.1 bits (62), Expect = 8.7
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = -1
Query: 408 RAPKARDPNSSAIRFQEADWC*SRRQHRKRKREAAPEASHCSWSQPQSRSRNLRTRNCRS 229
R ++RD + R + D SR + RKR R + S + +SRSR+ R RS
Sbjct: 38 RRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRS 97
Query: 228 R 226
R
Sbjct: 98 R 98
>AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein.
Length = 1031
Score = 29.1 bits (62), Expect = 8.7
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = -1
Query: 408 RAPKARDPNSSAIRFQEADWC*SRRQHRKRKREAAPEASHCSWSQPQSRSRNLRTRNCRS 229
R ++RD + R + D SR + RKR R + S + +SRSR+ R RS
Sbjct: 38 RRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRS 97
Query: 228 R 226
R
Sbjct: 98 R 98
>AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein.
Length = 708
Score = 29.1 bits (62), Expect = 8.7
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -1
Query: 378 SAIRFQEADWC*SRRQHRKRKREAAPEASHCSWSQPQSRSRNLRTRNCRSRPFSPS 211
SA R W SR + R R R ++ +S +SRSR+ RSR S S
Sbjct: 641 SASRSYSRSWSRSRSRRRSRTRTSSSSSSRSPSPGSRSRSRSRSRSRSRSRSQSRS 696
>AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein.
Length = 1058
Score = 29.1 bits (62), Expect = 8.7
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = -1
Query: 408 RAPKARDPNSSAIRFQEADWC*SRRQHRKRKREAAPEASHCSWSQPQSRSRNLRTRNCRS 229
R ++RD + R + D SR + RKR R + S + +SRSR+ R RS
Sbjct: 64 RRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRS 123
Query: 228 R 226
R
Sbjct: 124 R 124
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,725,840
Number of Sequences: 237096
Number of extensions: 1374275
Number of successful extensions: 5456
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 5022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5431
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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