Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27k03
         (751 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75...    29   5.2  

>02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-751889,
            752025-753905,754093-754296,754807-754899,755036-755122,
            755241-755328,755533-755645,755943-757259,757398-758672,
            759166-759273
          Length = 2233

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +3

Query: 327  KDDVICFSKLNDVICFSKLNWLYE*NSTCKTQSKNDVXCRM 449
            K D      L+D IC S L   Y  NS+C  Q    + CRM
Sbjct: 1177 KVDCSALVTLSDAICHSALFVCYIVNSSCHLQESIVLRCRM 1217


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,116,537
Number of Sequences: 37544
Number of extensions: 250080
Number of successful extensions: 222
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)