Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27k03
         (751 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.        27   0.82 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   3.3  

>DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.
          Length = 304

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +3

Query: 282 LNWLYE*NSTCKTQSKDDVICFSKLNDVI 368
           ++W+Y+  + CK +S     C+S ++ V+
Sbjct: 78  IDWVYKHTNNCKIESASRAACYSVVDKVL 106



 Score = 25.0 bits (52), Expect = 2.5
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = +3

Query: 30  LNWLYEYNSTCKT*SRDDVICFSKLNSL 113
           ++W+Y++ + CK  S     C+S ++ +
Sbjct: 78  IDWVYKHTNNCKIESASRAACYSVVDKV 105



 Score = 24.6 bits (51), Expect = 3.3
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 210 LNWLYEYNSTCKT*SRDDVICFS 278
           ++W+Y++ + CK  S     C+S
Sbjct: 78  IDWVYKHTNNCKIESASRAACYS 100


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 217  QFSFEKQMTSFLKFSFEKQMTSSLDCVLH 131
            Q+ ++KQ    L+FS  K+   +LD V+H
Sbjct: 1938 QYLYDKQ--GILRFSLHKEHNETLDRVIH 1964


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,436
Number of Sequences: 2352
Number of extensions: 10539
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)