Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27j23
         (526 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.              32   1.4  
Z34281-1|CAA84035.1|   62|Homo sapiens mucin protein.                  31   3.3  
AJ619019-1|CAF02096.1|   99|Homo sapiens transforming growth fac...    30   5.7  
Z34277-1|CAA84031.1|  477|Homo sapiens mucin protein.                  29   7.6  
AL121845-3|CAC28317.1|  106|Homo sapiens ADP-ribosylation factor...    29   10.0 

>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
          Length = 1349

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = -3

Query: 515 SSLSLPQRSINSSPTSHCCLIPHMSKSSLPTVSVFMDSSTRVLGSSEPP 369
           S+ S PQ SI+S+PTS     P  S  S PT S    +S     ++ PP
Sbjct: 822 STTSTPQTSISSAPTSSTTSAPTASTISAPTTST---TSFHTTSTTSPP 867



 Score = 29.5 bits (63), Expect = 7.6
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 515 SSLSLPQRSINSSPTSHCCLIPHMSKSSLPTVSVFMDSSTRVLGSSEP 372
           S+ S PQ S  S+PT+     P  S +S PT S      T +  SS P
Sbjct: 341 STTSTPQTSTTSAPTTSTTSAPTTSTTSAPTTSTTSTPQTSI--SSAP 386


>Z34281-1|CAA84035.1|   62|Homo sapiens mucin protein.
          Length = 62

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -3

Query: 515 SSLSLPQRSINSSPTSHCCLIPHMSKSSLPTVS 417
           S+ S PQ SI+S+PTS     P  S  S PT S
Sbjct: 30  STTSTPQTSISSAPTSSTTSAPTASTISAPTTS 62



 Score = 29.1 bits (62), Expect = 10.0
 Identities = 18/45 (40%), Positives = 21/45 (46%)
 Frame = -3

Query: 506 SLPQRSINSSPTSHCCLIPHMSKSSLPTVSVFMDSSTRVLGSSEP 372
           S PQ S  SSPT+     P  S +S PT S      T +  SS P
Sbjct: 1   STPQTSTTSSPTTSTTSAPTTSTTSAPTTSTTSTPQTSI--SSAP 43


>AJ619019-1|CAF02096.1|   99|Homo sapiens transforming growth factor
           receptor beta 1 protein.
          Length = 99

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -3

Query: 500 PQRSINSSPTSHCCLIPHMSKSSLPTVSVFMDSSTRVLGSSE 375
           P     S  T++CC   H +K  LPT   F   S+  LG  E
Sbjct: 28  PSSKTGSVTTTYCCNQDHCNKIELPTTGPFSVKSSPGLGPVE 69


>Z34277-1|CAA84031.1|  477|Homo sapiens mucin protein.
          Length = 477

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 515 SSLSLPQRSINSSPTSHCCLIPHMSKSSLPTVSVFMDSSTRVLGSSEP 372
           S+ S PQ S  S+PT+     P  S +S PT S      T +  SS P
Sbjct: 165 STTSTPQTSTTSAPTTSTTSAPTTSTTSAPTTSTTSTPQTSI--SSAP 210


>AL121845-3|CAC28317.1|  106|Homo sapiens ADP-ribosylation factor
           related protein 1 protein.
          Length = 106

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 364 YNGGSLDP-NTRVEESMKTLTVGKEDLLMWGIRQQCEVGEELIDRWGSDSEEC 519
           Y G SL    T V  ++ T+ VGK  L+ W +  Q    EEL   W  D  +C
Sbjct: 14  YKGMSLSKITTTVGLNIGTVDVGKARLMFWDLGGQ----EELQSLWDKDKTKC 62


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,229,689
Number of Sequences: 237096
Number of extensions: 1537860
Number of successful extensions: 4273
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4267
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)