Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27j11
         (330 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p pro...    77   5e-15
AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-P...    77   5e-15
AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-P...    77   5e-15
BT011516-1|AAS15652.1|   61|Drosophila melanogaster UT01263p pro...    27   7.5  
BT011079-1|AAR82745.1| 1100|Drosophila melanogaster SD01102p pro...    26   10.0 
AE014134-1692|AAF52810.1|  430|Drosophila melanogaster CG17633-P...    26   10.0 

>AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p
           protein.
          Length = 147

 Score = 77.0 bits (181), Expect = 5e-15
 Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = +2

Query: 41  MQLHIRGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXX 217
           MQL +RG  T   L+V+   +I  +K ++  +     E+ +L   G              
Sbjct: 16  MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 75

Query: 218 XXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEKQQKK 328
                 +P+LGGKVHGSLARAGKVKGQTPKVEKQ+KK
Sbjct: 76  FELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKK 112


>AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-PB,
           isoform B protein.
          Length = 132

 Score = 77.0 bits (181), Expect = 5e-15
 Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = +2

Query: 41  MQLHIRGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXX 217
           MQL +RG  T   L+V+   +I  +K ++  +     E+ +L   G              
Sbjct: 1   MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 60

Query: 218 XXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEKQQKK 328
                 +P+LGGKVHGSLARAGKVKGQTPKVEKQ+KK
Sbjct: 61  FELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKK 97


>AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-PA,
           isoform A protein.
          Length = 132

 Score = 77.0 bits (181), Expect = 5e-15
 Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = +2

Query: 41  MQLHIRGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXX 217
           MQL +RG  T   L+V+   +I  +K ++  +     E+ +L   G              
Sbjct: 1   MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 60

Query: 218 XXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEKQQKK 328
                 +P+LGGKVHGSLARAGKVKGQTPKVEKQ+KK
Sbjct: 61  FELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKK 97


>BT011516-1|AAS15652.1|   61|Drosophila melanogaster UT01263p
           protein.
          Length = 61

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = -1

Query: 312 STLGVCPLTLPARA---KDPCTLPPSNGTV 232
           STL V P   P      KD C LP S+GT+
Sbjct: 27  STLAVAPARTPLMQDPRKDSCGLPSSSGTI 56


>BT011079-1|AAR82745.1| 1100|Drosophila melanogaster SD01102p
           protein.
          Length = 1100

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 91  PGVHWSDQGTHSYSC 135
           PG++W+ +GTH   C
Sbjct: 34  PGINWTKEGTHDERC 48


>AE014134-1692|AAF52810.1|  430|Drosophila melanogaster CG17633-PA
           protein.
          Length = 430

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 52  YQRAIDTRPGRQWPGVHWSDQGTHSYSC 135
           Y       P R W G HW++ G  S +C
Sbjct: 249 YGSCFGADPNRNW-GFHWNEVGASSSAC 275


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,654,029
Number of Sequences: 53049
Number of extensions: 235900
Number of successful extensions: 589
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)