Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27j09
         (385 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            22   6.7  
AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    22   6.7  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    22   8.9  

>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 180 PESSCACPETSCACPE 227
           PE+SC C      CP+
Sbjct: 235 PEASCWCNSNPTQCPD 250


>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical
          protein protein.
          Length = 195

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 94 VFWLLPVSFP 65
          +FW LP SFP
Sbjct: 26 IFWFLPWSFP 35


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 150 TCVSQNTGTCPESSCACPETS 212
           T  +  T T P ++ ACP T+
Sbjct: 296 TTTTTTTTTTPTTATACPSTT 316


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.312    0.122    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,634
Number of Sequences: 2352
Number of extensions: 961
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)