Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27i24
         (559 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB058761-1|BAB47487.2| 2469|Homo sapiens KIAA1858 protein protein.     30   4.8  
Z25884-1|CAA81103.1|  988|Homo sapiens human ClC-1 muscle chlori...    30   6.3  
Z25753-1|CAB56792.1|  703|Homo sapiens skeletal muscle chloride ...    30   6.3  
Z25587-1|CAA80996.1|  988|Homo sapiens human ClC-1 muscle chlori...    30   6.3  
BC113495-1|AAI13496.1|  988|Homo sapiens chloride channel 1, ske...    30   6.3  
BC112156-1|AAI12157.1|  988|Homo sapiens chloride channel 1, ske...    30   6.3  
AC093673-1|AAS07500.1|  187|Homo sapiens unknown protein.              30   6.3  

>AB058761-1|BAB47487.2| 2469|Homo sapiens KIAA1858 protein protein.
          Length = 2469

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +1

Query: 304  PKLSPKREPPEGLYEIEMLPGA-RRLELPAP 393
            P   P+ + PE + E+ M+P A R LE+PAP
Sbjct: 1491 PSHCPEDDRPEAIPELHMVPAAWRGLEMPAP 1521


>Z25884-1|CAA81103.1|  988|Homo sapiens human ClC-1 muscle chloride
            channel protein.
          Length = 988

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = +1

Query: 304  PKLSPKREPPEGLYEIEMLPGARRLELPAPPGKEFRAPVLLAGPSLAPT 450
            P  SP  EPP  L   ++      LEL   PG E     +L GPSL  T
Sbjct: 930  PVPSPSPEPPLSLAPGKVEGELEELELVESPGLEEELADILQGPSLRST 978


>Z25753-1|CAB56792.1|  703|Homo sapiens skeletal muscle chloride
           channel protein protein.
          Length = 703

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = +1

Query: 304 PKLSPKREPPEGLYEIEMLPGARRLELPAPPGKEFRAPVLLAGPSLAPT 450
           P  SP  EPP  L   ++      LEL   PG E     +L GPSL  T
Sbjct: 645 PVPSPSPEPPLSLAPGKVEGELEELELVESPGLEEELADILQGPSLRST 693


>Z25587-1|CAA80996.1|  988|Homo sapiens human ClC-1 muscle chloride
            channel protein.
          Length = 988

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = +1

Query: 304  PKLSPKREPPEGLYEIEMLPGARRLELPAPPGKEFRAPVLLAGPSLAPT 450
            P  SP  EPP  L   ++      LEL   PG E     +L GPSL  T
Sbjct: 930  PVPSPSPEPPLSLAPGKVEGELEELELVESPGLEEELADILQGPSLRST 978


>BC113495-1|AAI13496.1|  988|Homo sapiens chloride channel 1, skeletal
            muscle (Thomsen disease, autosomal dominant) protein.
          Length = 988

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = +1

Query: 304  PKLSPKREPPEGLYEIEMLPGARRLELPAPPGKEFRAPVLLAGPSLAPT 450
            P  SP  EPP  L   ++      LEL   PG E     +L GPSL  T
Sbjct: 930  PVPSPSPEPPLSLAPGKVEGELEELELVESPGLEEELADILQGPSLRST 978


>BC112156-1|AAI12157.1|  988|Homo sapiens chloride channel 1, skeletal
            muscle (Thomsen disease, autosomal dominant) protein.
          Length = 988

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = +1

Query: 304  PKLSPKREPPEGLYEIEMLPGARRLELPAPPGKEFRAPVLLAGPSLAPT 450
            P  SP  EPP  L   ++      LEL   PG E     +L GPSL  T
Sbjct: 930  PVPSPSPEPPLSLAPGKVEGELEELELVESPGLEEELADILQGPSLRST 978


>AC093673-1|AAS07500.1|  187|Homo sapiens unknown protein.
          Length = 187

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = +1

Query: 304 PKLSPKREPPEGLYEIEMLPGARRLELPAPPGKEFRAPVLLAGPSLAPT 450
           P  SP  EPP  L   ++      LEL   PG E     +L GPSL  T
Sbjct: 129 PVPSPSPEPPLSLAPGKVEGELEELELVESPGLEEELADILQGPSLRST 177


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,101,745
Number of Sequences: 237096
Number of extensions: 1236993
Number of successful extensions: 7811
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7803
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)