Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27i24
         (559 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   4.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   4.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   4.8  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   6.4  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   8.4  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   8.4  
AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced prot...    21   8.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.4  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 442 QERALPIARARGTPFPEEP 386
           ++R  P ARA G PF  +P
Sbjct: 631 RDRKYPDARAMGYPFDRQP 649


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 70  SCVRGAPLDSR 38
           SC  GAPLDS+
Sbjct: 533 SCAPGAPLDSK 543


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 70  SCVRGAPLDSR 38
           SC  GAPLDS+
Sbjct: 533 SCAPGAPLDSK 543


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 70  SCVRGAPLDSR 38
           SC  GAPLDS+
Sbjct: 533 SCAPGAPLDSK 543


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = +1

Query: 337 GLYEIEMLPGARRLELPAPPGKEFRAPVLLAGPSLAPTHSVIQC 468
           GL+ +  L G   L   AP G         A   L+   SV +C
Sbjct: 133 GLHGLHGLHGLHGLSSSAPTGSSCGPGAAAAAALLSKRRSVSEC 176


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 84  LRVPTALLVLHPCAHDENINKC 149
           L+ P  + V HP    + +N+C
Sbjct: 15  LKYPMVVHVYHPYRQPDGMNQC 36


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 84  LRVPTALLVLHPCAHDENINKC 149
           L+ P  + V HP    + +N+C
Sbjct: 15  LKYPMVVHVYHPYRQPDGMNQC 36


>AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced
          protein 75 protein.
          Length = 58

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 67 CVRGAPLDSRDSFAR 23
          C RGAP DS +   R
Sbjct: 41 CYRGAPQDSENLLGR 55


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced
          protein 75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 67 CVRGAPLDSRDSFAR 23
          C RGAP DS +   R
Sbjct: 41 CYRGAPQDSENLLGR 55


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,176
Number of Sequences: 438
Number of extensions: 2490
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)