Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27i21
         (160 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL832623-1|CAD89946.1|  641|Homo sapiens hypothetical protein pr...    28   6.3  
AL832191-1|CAD91163.1|  641|Homo sapiens hypothetical protein pr...    28   6.3  
AK131422-1|BAD18569.1|  408|Homo sapiens protein ( Homo sapiens ...    28   6.3  
X68688-1|CAA48647.1|   34|Homo sapiens ZNF33B protein.                 27   8.4  
AL022345-3|CAI23623.1|  778|Homo sapiens zinc finger protein 33B...    27   8.4  
AJ491697-1|CAD36956.1|  778|Homo sapiens zinc finger protein 33b...    27   8.4  

>AL832623-1|CAD89946.1|  641|Homo sapiens hypothetical protein
           protein.
          Length = 641

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 6   CRLLFSRKINFIHHYSSYIXDKPIK 80
           CR  FS K + IHH  ++  +KP +
Sbjct: 482 CRKTFSEKSSLIHHQRTHTGEKPFE 506


>AL832191-1|CAD91163.1|  641|Homo sapiens hypothetical protein
           protein.
          Length = 641

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 6   CRLLFSRKINFIHHYSSYIXDKPIK 80
           CR  FS K + IHH  ++  +KP +
Sbjct: 482 CRKTFSEKSSLIHHQRTHTGEKPFE 506


>AK131422-1|BAD18569.1|  408|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16542 fis, clone OCBBF3000167, moderately
           similar to ZINC FINGER PROTEIN 83. ).
          Length = 408

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 6   CRLLFSRKINFIHHYSSYIXDKPIK 80
           C  +F+RK +  HH+  +  DKP K
Sbjct: 319 CGKVFNRKTHLAHHHRLHTGDKPYK 343


>X68688-1|CAA48647.1|   34|Homo sapiens ZNF33B protein.
          Length = 34

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 6  CRLLFSRKINFIHHYSSYIXDKP 74
          CR  FS+K N I H  ++I +KP
Sbjct: 10 CRKTFSQKSNLIVHQRTHIGEKP 32


>AL022345-3|CAI23623.1|  778|Homo sapiens zinc finger protein 33B
           protein.
          Length = 778

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 6   CRLLFSRKINFIHHYSSYIXDKP 74
           CR  FS+K N I H  ++I +KP
Sbjct: 754 CRKTFSQKSNLIVHQRTHIGEKP 776


>AJ491697-1|CAD36956.1|  778|Homo sapiens zinc finger protein 33b
           protein.
          Length = 778

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 6   CRLLFSRKINFIHHYSSYIXDKP 74
           CR  FS+K N I H  ++I +KP
Sbjct: 754 CRKTFSQKSNLIVHQRTHIGEKP 776


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,960,081
Number of Sequences: 237096
Number of extensions: 170951
Number of successful extensions: 977
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 76,859,062
effective HSP length: 32
effective length of database: 69,271,990
effective search space used: 1385439800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)