Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27i21
         (160 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051819-1|AAK93243.1|  346|Drosophila melanogaster LD32747p pro...    27   2.7  
AE014134-750|AAF51003.2|  346|Drosophila melanogaster CG15436-PA...    27   2.7  

>AY051819-1|AAK93243.1|  346|Drosophila melanogaster LD32747p
           protein.
          Length = 346

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 6   CRLLFSRKINFIHHYSSYIXDKPIK-XXXDTSNALXEQILLLKELHLP 146
           C   F+RK +  +H+ S+  ++P K      + A+ + +     LHLP
Sbjct: 243 CTKTFTRKFHLDNHFRSHTGERPFKCSHCPKAFAMKQHLKQHSRLHLP 290


>AE014134-750|AAF51003.2|  346|Drosophila melanogaster CG15436-PA
           protein.
          Length = 346

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 6   CRLLFSRKINFIHHYSSYIXDKPIK-XXXDTSNALXEQILLLKELHLP 146
           C   F+RK +  +H+ S+  ++P K      + A+ + +     LHLP
Sbjct: 243 CTKTFTRKFHLDNHFRSHTGERPFKCSHCPKAFAMKQHLKQHSRLHLP 290


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,366,897
Number of Sequences: 53049
Number of extensions: 57724
Number of successful extensions: 134
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 24,988,368
effective HSP length: 33
effective length of database: 23,237,751
effective search space used: 441517269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)