Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27i20
         (213 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030225-1|ABN49364.1|   89|Drosophila melanogaster IP18208p pro...    28   2.0  
BT030198-1|ABN49337.1|   89|Drosophila melanogaster IP18008p pro...    28   2.0  
BT010317-1|AAQ23635.1|  956|Drosophila melanogaster AT05393p pro...    27   2.7  
BT001363-1|AAN71118.1|  538|Drosophila melanogaster AT29936p pro...    27   2.7  
AE014296-54|AAN11430.1|  538|Drosophila melanogaster CG17142-PB,...    27   2.7  
AE014296-53|AAF47356.2|  956|Drosophila melanogaster CG17142-PA,...    27   2.7  
AY051524-1|AAK92948.1|  369|Drosophila melanogaster GH17972p pro...    27   3.6  
AJ621420-1|CAF18556.1|  357|Drosophila melanogaster alpha1,4-N-a...    27   3.6  
AE014134-537|AAF51162.1|  369|Drosophila melanogaster CG17223-PA...    27   3.6  

>BT030225-1|ABN49364.1|   89|Drosophila melanogaster IP18208p
           protein.
          Length = 89

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 103 FLIWCTVYKYYLVGTLFIILFWLYVLF 23
           +LIWC      LV  +F+IL+W+Y LF
Sbjct: 4   WLIWCACG---LVFDVFLILWWVYELF 27


>BT030198-1|ABN49337.1|   89|Drosophila melanogaster IP18008p
           protein.
          Length = 89

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 103 FLIWCTVYKYYLVGTLFIILFWLYVLF 23
           +LIWC      LV  +F+IL+W+Y LF
Sbjct: 4   WLIWCACG---LVFDVFLILWWVYELF 27


>BT010317-1|AAQ23635.1|  956|Drosophila melanogaster AT05393p
           protein.
          Length = 956

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
 Frame = -3

Query: 103 FLIWCTVYKYYLVG----TLFIILFWLYVLF 23
           FL W  + K++L+     TLF+ILF  YV++
Sbjct: 483 FLKWRRIRKFFLMSLAYHTLFVILFTFYVIW 513


>BT001363-1|AAN71118.1|  538|Drosophila melanogaster AT29936p
           protein.
          Length = 538

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
 Frame = -3

Query: 103 FLIWCTVYKYYLVG----TLFIILFWLYVLF 23
           FL W  + K++L+     TLF+ILF  YV++
Sbjct: 65  FLKWRRIRKFFLMSLAYHTLFVILFTFYVIW 95


>AE014296-54|AAN11430.1|  538|Drosophila melanogaster CG17142-PB,
           isoform B protein.
          Length = 538

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
 Frame = -3

Query: 103 FLIWCTVYKYYLVG----TLFIILFWLYVLF 23
           FL W  + K++L+     TLF+ILF  YV++
Sbjct: 65  FLKWRRIRKFFLMSLAYHTLFVILFTFYVIW 95


>AE014296-53|AAF47356.2|  956|Drosophila melanogaster CG17142-PA,
           isoform A protein.
          Length = 956

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
 Frame = -3

Query: 103 FLIWCTVYKYYLVG----TLFIILFWLYVLF 23
           FL W  + K++L+     TLF+ILF  YV++
Sbjct: 483 FLKWRRIRKFFLMSLAYHTLFVILFTFYVIW 513


>AY051524-1|AAK92948.1|  369|Drosophila melanogaster GH17972p
           protein.
          Length = 369

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 127 YIFRHFRDFLIWCTVYKY 74
           Y+F H  DFL + T+Y+Y
Sbjct: 177 YLFSHISDFLRYLTLYRY 194


>AJ621420-1|CAF18556.1|  357|Drosophila melanogaster
           alpha1,4-N-acetylgalactosaminyltransferaseprotein.
          Length = 357

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 127 YIFRHFRDFLIWCTVYKY 74
           Y+F H  DFL + T+Y+Y
Sbjct: 165 YLFSHISDFLRYLTLYRY 182


>AE014134-537|AAF51162.1|  369|Drosophila melanogaster CG17223-PA
           protein.
          Length = 369

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 127 YIFRHFRDFLIWCTVYKY 74
           Y+F H  DFL + T+Y+Y
Sbjct: 177 YLFSHISDFLRYLTLYRY 194


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,150,613
Number of Sequences: 53049
Number of extensions: 123775
Number of successful extensions: 227
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 24,988,368
effective HSP length: 50
effective length of database: 22,335,918
effective search space used: 446718360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)