Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27i20
(213 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 0.31
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 22 0.72
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 0.72
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 1.3
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 1.7
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 1.7
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 1.7
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 20 2.9
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 20 2.9
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 20 3.8
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 19 5.1
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 19 5.1
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 19 5.1
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 19 6.7
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 19 6.7
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 23.4 bits (48), Expect = 0.31
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -3
Query: 166 FCCXVYFT*QINLYIFRHFRDFLIWCTVYKYYLVGTLFIILFWLY-VLFNIXXAKY 2
F C F Q LY++ D+ + Y L G L+ + +L+N+ KY
Sbjct: 280 FICWAPFHTQRLLYVYAQESDYYPDLNEWLYILSGCLYYFSTTINPILYNLMSIKY 335
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 22.2 bits (45), Expect = 0.72
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 70 LVGTLFIILFWLYVLFNI 17
LVG LF+IL +L V NI
Sbjct: 27 LVGFLFLILIFLSVAGNI 44
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.2 bits (45), Expect = 0.72
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -3
Query: 76 YYLVGTLFIILFW 38
+ ++GT+F+ LFW
Sbjct: 212 FAMIGTIFLWLFW 224
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.4 bits (43), Expect = 1.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3
Query: 58 LFIILFWLYVLF 23
LFIIL+W +LF
Sbjct: 376 LFIILYWPILLF 387
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.0 bits (42), Expect = 1.7
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 97 IWCTVYKYYLVGTLFIILFWLYVLFNI 17
+ C Y++ +FIILF+ +L +I
Sbjct: 221 VTCIFIWAYVIPLIFIILFYSRLLSSI 247
Score = 19.0 bits (37), Expect = 6.7
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -1
Query: 195 SFTYFWKPFFSVVAFI 148
+FT+FW F+V+ +
Sbjct: 176 AFTWFWVTPFTVLPLL 191
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 1.7
Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
Frame = -2
Query: 77 VLFSRYTIYYF--ILVVCVV 24
V+ R T+YYF ++V CV+
Sbjct: 225 VIIRRRTLYYFFNLIVPCVL 244
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.0 bits (42), Expect = 1.7
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 97 IWCTVYKYYLVGTLFIILFWLYVLFNI 17
+ C Y++ +FIILF+ +L +I
Sbjct: 221 VTCIFIWAYVIPLIFIILFYSRLLSSI 247
Score = 19.0 bits (37), Expect = 6.7
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -1
Query: 195 SFTYFWKPFFSVVAFI 148
+FT+FW F+V+ +
Sbjct: 176 AFTWFWVTPFTVLPLL 191
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 20.2 bits (40), Expect = 2.9
Identities = 7/30 (23%), Positives = 15/30 (50%)
Frame = -2
Query: 104 FSNLVYSI*VLFSRYTIYYFILVVCVV*YF 15
F + Y+ V+ +YY +++ + YF
Sbjct: 59 FKGIGYAAAVMSCWMNVYYIVILAWAIFYF 88
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 20.2 bits (40), Expect = 2.9
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 58 LFIILFWLYVL 26
LFI+L W Y +
Sbjct: 164 LFIVLIWTYTI 174
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 19.8 bits (39), Expect = 3.8
Identities = 5/23 (21%), Positives = 15/23 (65%)
Frame = -3
Query: 106 DFLIWCTVYKYYLVGTLFIILFW 38
DF+I+ ++ +Y+ + + L++
Sbjct: 342 DFIIYSSLSSFYIPCIIMVFLYY 364
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 19.4 bits (38), Expect = 5.1
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -3
Query: 61 TLFIILFWL 35
T+F +LFWL
Sbjct: 42 TVFSVLFWL 50
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 19.4 bits (38), Expect = 5.1
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -3
Query: 61 TLFIILFWL 35
T+F +LFWL
Sbjct: 490 TVFSVLFWL 498
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 19.4 bits (38), Expect = 5.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 15 KILNNTYNQNKI 50
K +NN YN N++
Sbjct: 554 KFINNDYNFNEV 565
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 19.0 bits (37), Expect = 6.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 101 KIPKMSENVKIDLSGEINATTEKK 172
K K+ + VKI IN+TT K+
Sbjct: 160 KNSKLLKQVKIPHDIAINSTTGKR 183
Score = 19.0 bits (37), Expect = 6.7
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 73 NTYILYTKLENP 108
N I YT+ ENP
Sbjct: 403 NQLIRYTRCENP 414
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 19.0 bits (37), Expect = 6.7
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -2
Query: 116 TF*GFSNLVYSI*V-LFSRYTIYYFILVVCVV*Y 18
TF F + I LF +Y+F LVV + Y
Sbjct: 191 TFNAFPTYTHEITYSLFGMIMMYWFPLVVIIYTY 224
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,098
Number of Sequences: 438
Number of extensions: 995
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used: 3165825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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