Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27i18
         (324 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr...    28   1.3  
U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical pr...    27   3.1  
Z92831-6|CAB07365.2|  355|Caenorhabditis elegans Hypothetical pr...    26   5.4  
Z92777-12|CAJ58496.1|  355|Caenorhabditis elegans Hypothetical p...    26   5.4  
Z77134-2|CAB00873.1|  877|Caenorhabditis elegans Hypothetical pr...    26   5.4  
Z70267-1|CAA94211.1|  307|Caenorhabditis elegans Hypothetical pr...    26   5.4  
AF039053-16|AAC25869.1|  497|Caenorhabditis elegans Cytochrome p...    26   5.4  
AF067211-16|AAC16988.3|  399|Caenorhabditis elegans Hypothetical...    25   9.5  

>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
            presynaptic morphologyprotein 1 protein.
          Length = 3766

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = +3

Query: 66   YIWEFNRRMXSVKNINKVKTTAT*ITQFKHGLSSPSSFFNRCHIWFDTPAPFFSRYHTQT 245
            ++ + N R+ +  N +   T+   I  F   LS+PS+         D P P  S +    
Sbjct: 2593 FLLDLNSRLQTESNSSSTATSGWTINLFPTHLSTPSTMPRSQQKRLDVP-PNNSVHQNSY 2651

Query: 246  QKLGLQTPPG 275
             KLG  + PG
Sbjct: 2652 MKLGYSSDPG 2661


>U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical
           protein F10D7.1 protein.
          Length = 656

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 146 LCNLCSCSFYLINIFYAXHS 87
           LC+LC    YLINIF++  S
Sbjct: 64  LCSLCYIFTYLINIFFSHFS 83


>Z92831-6|CAB07365.2|  355|Caenorhabditis elegans Hypothetical
           protein F22G12.1 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 23  KHSNKNLNDQDELNIYLGVQSSNA 94
           +H  +  N +D  N+ LG++SSNA
Sbjct: 169 EHQTRMTNIEDTQNMQLGIESSNA 192


>Z92777-12|CAJ58496.1|  355|Caenorhabditis elegans Hypothetical
           protein F22G12.1 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 23  KHSNKNLNDQDELNIYLGVQSSNA 94
           +H  +  N +D  N+ LG++SSNA
Sbjct: 169 EHQTRMTNIEDTQNMQLGIESSNA 192


>Z77134-2|CAB00873.1|  877|Caenorhabditis elegans Hypothetical
           protein R09H10.4 protein.
          Length = 877

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = -2

Query: 146 LCNLCSCSFYLINIFYAXHSTIELPNICLTRLGRLN 39
           +C +  C  ++ N+F    +T+ + +IC+   G L+
Sbjct: 691 ICMMIVCFLFMYNVFTVFVATLAITSICIGVFGFLS 726


>Z70267-1|CAA94211.1|  307|Caenorhabditis elegans Hypothetical
           protein K04C1.1 protein.
          Length = 307

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +3

Query: 159 LSSPSSFFNRCHIWFDTPAPFFSRYHTQTQKL 254
           L + S FF R   W D   PF S   T TQ L
Sbjct: 234 LKNSSEFFERLVDWIDLLVPFASDALTLTQPL 265


>AF039053-16|AAC25869.1|  497|Caenorhabditis elegans Cytochrome p450
           family protein 33C1 protein.
          Length = 497

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 144 QFKHGLSSPSSFFNRCHIWFDTPAPFFSR 230
           + KH + SP+  F + HI+     P F++
Sbjct: 195 ELKHIIDSPAEIFGKLHIFLAMNIPIFAK 223


>AF067211-16|AAC16988.3|  399|Caenorhabditis elegans Hypothetical
           protein B0205.4 protein.
          Length = 399

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 150 KHGLSSPSSFFNRCHIWFDTPAPFFSRYHTQTQKL 254
           +HG+    +  NR H   DTP  ++ R   Q  K+
Sbjct: 264 RHGMDISMNSRNRIHGHVDTPIEYYKRAIQQISKI 298


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,815,370
Number of Sequences: 27780
Number of extensions: 131947
Number of successful extensions: 274
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)