Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27i12
(648 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 90 3e-19
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 72 6e-14
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 68 1e-12
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 52 9e-08
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 52 9e-08
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 49 5e-07
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 48 9e-07
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 46 6e-06
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 45 8e-06
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 44 2e-05
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 44 3e-05
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 42 6e-05
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 41 2e-04
SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces... 39 7e-04
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 37 0.002
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 37 0.003
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 37 0.003
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 36 0.005
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 34 0.020
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 33 0.027
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 33 0.035
SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|... 27 1.8
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.3
SPAC824.05 |vps16||HOPS complex subunit Vps16 |Schizosaccharomyc... 27 3.1
SPBC27.05 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 26 5.4
SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces pombe... 25 7.1
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 25 7.1
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 89.8 bits (213), Expect = 3e-19
Identities = 51/136 (37%), Positives = 77/136 (56%)
Frame = +1
Query: 241 KWTCGIYNGKTKMDGKTVIVTGCTSGIGKETARELAQRGARVIMACRNMDAAEKVKTEII 420
KWT +N + GK +VTG + GIG TA ELA++GA+V +A RN + +KV +I
Sbjct: 31 KWT---FNDIPDLTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIH 87
Query: 421 ETTRNTKIEVKKLDLSSFASIREFAKDINKTEARLDVLVHNAGYAETFKKNTTVDNLEMT 600
+ R++KI +LDL F S+ + A+ E +L +LV+NAG T D E+
Sbjct: 88 DEVRHSKIRFLRLDLLDFESVYQAAESFIAKEEKLHILVNNAGIMNP-PFELTKDGYELQ 146
Query: 601 MATNHYGPFLLTHLLI 648
+ TN+ +L T LL+
Sbjct: 147 IQTNYLSHYLFTELLL 162
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 72.1 bits (169), Expect = 6e-14
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Frame = +1
Query: 271 TKMDGKTVIVTGCTSGIGKETARELAQ-RGARVIMACRNMDAAEKVKTEIIETTRNTKIE 447
+++DGKT+++TG +SGIGK TA E+A+ ++I+A R E++ E +E+ +
Sbjct: 2 SRLDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKE-LESKYEVSVL 60
Query: 448 VKKLDLSSFASIREFAKDINKTEARLDVLVHNAGYAETFKK--NTTVDNLEMTMATNHYG 621
KLD+S SI + + K A +DVL++NAG A K + +D+ + TN G
Sbjct: 61 PLKLDVSDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLG 120
Query: 622 PFLLTHLLI 648
+T ++
Sbjct: 121 MMAMTRAVL 129
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 68.1 bits (159), Expect = 1e-12
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Frame = +1
Query: 244 WTCG-IYNGKTKMDGKTVIVTGCTSGIGKETARELAQRGARVIMACRNMDAAEKVK--TE 414
WT G + KM+G V+VTG +SGIG+ +LA GA+V++ R V +
Sbjct: 61 WTSGRTTTWERKMNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILLRTEPDQFTVDYIMD 120
Query: 415 IIETTRNTKIEVKKLDLSSFASIREFA-KDINKTE-ARLDVLVHNAG--YAETFKKNTTV 582
+ + T+N I + DLSS S+R+FA K I+ T RLD++V +G + TT
Sbjct: 121 LRKRTKNQLIYTEVCDLSSMLSVRKFATKWIDCTPIRRLDMIVLCSGVLLPPFMDRQTTE 180
Query: 583 DNLEMTMATNHYGPFLLTHLL 645
+ +E+ ATN GP+ L +L
Sbjct: 181 EGVELQWATNFLGPYQLLRIL 201
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 51.6 bits (118), Expect = 9e-08
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Frame = +1
Query: 256 IYNGKTKMDGKTVIVTGCTSGIGKETARELAQRGARVIMAC--RNMDAAEKVKTEIIETT 429
++ G K+ K ++TG SGIGK A A+ G+ ++++C D AE + I
Sbjct: 33 VHVGSGKLAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIEREG 92
Query: 430 RNTKIEVKKLDLSSFASIREFAKDINKTEARLDVLVHNAGYAETFKKNTTVDN--LEMTM 603
RN I KLD S + R+ K +DVLV+N Y + + +D+ ++T
Sbjct: 93 RNCWIWEGKLDKSD--NCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTF 150
Query: 604 ATNHYGPFLLTHLLI 648
TN + F +T I
Sbjct: 151 KTNIFSFFWVTKAAI 165
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 51.6 bits (118), Expect = 9e-08
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Frame = +1
Query: 286 KTVIVTGCTSGIGKETARELAQRGARVIMA-CRNMDAAEKVKTEIIETTRN-TKIEVKKL 459
K + G GIG +EL+ R V+ A R +AA TE+ E +++ + + + KL
Sbjct: 6 KIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEAA----TELQEWSKSHSNVHIIKL 61
Query: 460 DLSSFASIREFAKDINKTEARLDVLVHNAGYAETFKK--NTTVDNLEMTMATNHYGP 624
D+SS S E A+++ K ++DVL N+G +F NT D TN GP
Sbjct: 62 DISSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNSHYKTNVLGP 118
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 49.2 bits (112), Expect = 5e-07
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Frame = +1
Query: 283 GKTVIVTGCTSGIGKETARELAQRGARVIMACRNMDAAEKVKTEIIETTRNTKIEVKKLD 462
G +VTG T GIGKE A +LA G V++ R + + + E +ET K +D
Sbjct: 57 GYWAVVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKE-LETVAKVKTRTIAID 115
Query: 463 L--SSFASIREFAKDINKTEARLDVLVHNAG---YAETFKKNTTVDNLEMTMATNHYGPF 627
++ + + +D+ T + VL++N G Y T TTV ++ M N +G
Sbjct: 116 YTKTTAETFEKLHQDLVGTP--ITVLINNVGQSHYMPTSFAETTVKEMDDIMHINCFGTL 173
Query: 628 LLTHLLI 648
T ++
Sbjct: 174 HTTKAVL 180
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 48.4 bits (110), Expect = 9e-07
Identities = 29/91 (31%), Positives = 42/91 (46%)
Frame = +1
Query: 277 MDGKTVIVTGCTSGIGKETARELAQRGARVIMACRNMDAAEKVKTEIIETTRNTKIEVKK 456
+ GK +V G GIG A AQ G VI+ D EK K ET ++ K
Sbjct: 19 LKGKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEET--GVQVHTLK 76
Query: 457 LDLSSFASIREFAKDINKTEARLDVLVHNAG 549
+D+S ++ ++I K + V+V NAG
Sbjct: 77 IDISRSDTVEAGVEEIQKIFKEIHVVVANAG 107
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 45.6 bits (103), Expect = 6e-06
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Frame = +1
Query: 283 GKTVIVTGCTSGIGKETARELAQR-GARVIMACRNMDAAEKVKTEIIETTRNTKIEVKKL 459
G ++ G GIG +EL+ + G V + R +A ++K + ++ + + KL
Sbjct: 6 GIVYVIVGGNRGIGLSLVKELSNKEGVTVFASARGPGSASELKDW---SKTHSNVHIIKL 62
Query: 460 DLSSFASIREFAKDINKTEARLDVLVHNAGYAETFKK-NTTVDNLEMT-MATNHYGP 624
D++S S ++ A + K +DVL N+G +++F+ T D L M+ TN GP
Sbjct: 63 DVTSLRSAKDAAMQVEKVVKCIDVLWVNSGISKSFQPVLKTSDELWMSHYQTNVLGP 119
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 45.2 bits (102), Expect = 8e-06
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Frame = +1
Query: 286 KTVIVTGCTSGIGKETARELAQRGARVIMA-CRNMDAAEKVKTEIIETTRNTKIEVKKLD 462
K + G GIG +EL+ R V+ A R AA K++ + ++ + + KLD
Sbjct: 6 KIYFIAGGNRGIGLSLVKELSNRKGTVVFASARKPGAATKLQEW---SKSHSNVHIIKLD 62
Query: 463 LSSFASIREFAKDINKTEARLDVLVHNAGYAETFKK--NTTVDNLEMTMATNHYGP 624
+SS S E A+++ K +DVL N+ +F NT D TN GP
Sbjct: 63 VSSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVLGP 118
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 44.0 bits (99), Expect = 2e-05
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Frame = +1
Query: 286 KTVIVTGCTSG-IGKETARELAQRGARVIMACRNMDAAEKVKTEIIETTRNTKIEVKKLD 462
K V++TGC+ G IG A + Q G +V+ R ++ + + ++T KLD
Sbjct: 5 KFVLITGCSEGGIGNALALKFHQEGFQVLATARQVERMDNLTKAGLQTL--------KLD 56
Query: 463 LSSFASIREFAKDINK-TEARLDVLVHNAGY-AETFKKNTTVDNLEMTMATNHYG 621
++ S+RE +++ K T L L++NAG + ++++ M N YG
Sbjct: 57 VTDEDSVREVEQEVRKFTNGSLHYLINNAGAPCSAPAIDLDIEDVSKVMDVNFYG 111
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 43.6 bits (98), Expect = 3e-05
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Frame = +1
Query: 292 VIVTGCTSGIGKETARELAQRGARVIMACRNMDAAEKVKTEIIETT--RNTKIEVKKLDL 465
++VTG + G+GK A+EL RGA V + R + ++ E+ ++ + ++ + +DL
Sbjct: 25 ILVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAELSDSKIHEDQQVSFESVDL 84
Query: 466 SSFASIREFAKDINKTEARLDVLVHNAG 549
+S+ S+ I + D +VH AG
Sbjct: 85 TSYESVHSM---IERLPFCPDHVVHCAG 109
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 42.3 bits (95), Expect = 6e-05
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Frame = +1
Query: 289 TVIVTGCTSGIGKETARELAQRGARVIMACRNMDAAEKVKTEIIETTRNTKIEVKKLDLS 468
TV++TG + G+G + +G VI R D T ++K+ KLD++
Sbjct: 7 TVLITGSSKGLGYALVKVGLAQGYNVIACSRAPDTI---------TIEHSKLLKLKLDVT 57
Query: 469 SFASIREFAKDINKTEARLDVLVHNAGYAETFK-KNTTVDNLEMTMATNHYGPFLLT 636
S+ KD + +D++++NAGY + ++ ++ + M N +G +T
Sbjct: 58 DVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYIT 114
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 40.7 bits (91), Expect = 2e-04
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +1
Query: 286 KTVIVTGCTSGIGKETARELAQR-GARVIMACRNMDAAEKVKTEIIETTRN-TKIEVKKL 459
K + G GIG +EL+ R G V + R +AA TE+ E +++ ++ +L
Sbjct: 6 KVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEAA----TELQEWSKSHPNVKTVEL 61
Query: 460 DLSSFASIREFAKDINKTEARLDVLVHNAGYAETF 564
D++S S E A+ + K +DVL N+G +++
Sbjct: 62 DVTSQQSANEAAQSVAKAVDGIDVLWLNSGICQSY 96
>SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 338
Score = 38.7 bits (86), Expect = 7e-04
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Frame = +1
Query: 286 KTVIVTGCTSGIGKETARELAQ----------RGARVIMACRNMDAAEKVKTEIIE--TT 429
K ++TG SG+G A L Q VI+ CR+ + AE + E
Sbjct: 5 KYALITGSNSGLGFGIATRLLQFYQPRLQDEPEVFTVILTCRSREKAEDACRRLKEFFPD 64
Query: 430 RNTKIEVKKLDLSSFASIREFAKDINKTEARLDVLVHNAG 549
R ++E LDLS+ AS+ +DI +LD + NAG
Sbjct: 65 RKIRLEYVLLDLSNMASVEAAVQDIATRFPKLDFVYLNAG 104
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 37.1 bits (82), Expect = 0.002
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +1
Query: 277 MDGKTVIVTGCTSGIGKETARELAQRGARV-IMACRNMDAAEKVKTEIIETTRNTKIEVK 453
+ GKT ++TG + GIG A+ A G+ V ++ RN A E + + +
Sbjct: 7 LKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAE--LRDKHGVQAKAY 64
Query: 454 KLDLSSFASIREFAKD-INKTEARLDVLVHNAGYA 555
+ + +++ E + + RLDV++ NAG A
Sbjct: 65 SCPIENRSAVIETTNQAVEELGGRLDVMIANAGIA 99
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +1
Query: 427 TRNTKIEVKKLDLSSFASIREFAKDINKTEARLDVLVHNAGYA-ETFKKNTTVDNLEMTM 603
+R + V +LD+++F+SI++ + R+DVL++NAGY+ + ++TT + +
Sbjct: 11 SRLENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIF 70
Query: 604 ATNHYG 621
TN +G
Sbjct: 71 NTNVFG 76
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +1
Query: 427 TRNTKIEVKKLDLSSFASIREFAKDINKTEARLDVLVHNAGYA-ETFKKNTTVDNLEMTM 603
+R + V +LD+++F+SI++ + R+DVL++NAGY+ + ++TT + +
Sbjct: 11 SRLENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIF 70
Query: 604 ATNHYG 621
TN +G
Sbjct: 71 NTNVFG 76
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 35.9 bits (79), Expect = 0.005
Identities = 25/94 (26%), Positives = 45/94 (47%)
Frame = +1
Query: 277 MDGKTVIVTGCTSGIGKETARELAQRGARVIMACRNMDAAEKVKTEIIETTRNTKIEVKK 456
++G+ V++TG GIGK + + G RV +D + K + + + +V K
Sbjct: 3 VEGRVVLITGAAGGIGKVLCKMFTELGDRV----AGIDIVDPSKVQ--DAALALQADVSK 56
Query: 457 LDLSSFASIREFAKDINKTEARLDVLVHNAGYAE 558
D I + + +T +DVL++NAG A+
Sbjct: 57 AD-----QIETAIEKVIQTLGPIDVLINNAGLAD 85
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 33.9 bits (74), Expect = 0.020
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +1
Query: 256 IYNGKTKMDGKTVIVTGCTSGIGKETARELAQRGARVIMACRNMDAAEKVKTEIIETTRN 435
+Y+ K GKTV+ GC +GI + A+ GA+ + A N D II+ +
Sbjct: 247 VYHNKHIFAGKTVLDVGCGTGI---LSMFCAKAGAKKVYAVDNSD--------IIQMAIS 295
Query: 436 TKIEVKKLDLSSFASIREFAKDINKTEARLDVLVHN-AGYAETFK 567
E D +F IR +DI+ ++D+++ GYA TF+
Sbjct: 296 NAFENGLADQITF--IRGKIEDISLPVGKVDIIISEWMGYALTFE 338
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 33.5 bits (73), Expect = 0.027
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = +1
Query: 286 KTVIVTGCTSGIGKETARELAQRGARVIMACRNMDAAEKVKTEIIETTRNTKIEVKKLDL 465
K +++TG + GIG TA E Q+ A+VI R++ +++T +I+ ++ + VK D+
Sbjct: 7 KVILLTGSSKGIGLATA-EALQKKAKVIAVSRSL--TPELETLLIQNP-DSFVHVKG-DV 61
Query: 466 SSF--ASIREFAKDINKTEARLDVLVHNAGYAETFKKNTTVD 585
+ ASI K K LD ++ NAG E K D
Sbjct: 62 TEVGKASIETAIKKFGK----LDSVILNAGVLEPIAKIADAD 99
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 33.1 bits (72), Expect = 0.035
Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Frame = +1
Query: 286 KTVIVTGCTSGIGKETARELAQRGARVIMACRNMDAAEKVKTEIIETTRNTKIEVKKLDL 465
+ V++TG +SG+GK A+ +Q+G + + RN E E +++ K + L +
Sbjct: 2 RKVLITGGSSGLGKRIAQIWSQKGHQCHIVGRN----EFHLKETLQSLSVAKGQQHTLTI 57
Query: 466 SSFASIREFAKDINKTEARLDVLVHNAGYAE-TFKKNTTVDNLEMTMATNHYGPFLLTHL 642
+ S + K I ++ +D +VH AG + + T+ ++ + TN L+ +
Sbjct: 58 ADVQSDMKNLKSIFES-VEIDTVVHAAGVLQSSLCVRTSEKEIDSIICTNLVSAIKLSKM 116
Query: 643 LI 648
I
Sbjct: 117 AI 118
>SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +2
Query: 533 LCTTQDTPKHLKRTQQLITSK*LWPQTITVPF 628
L TT TPK KRT Q++T K L VPF
Sbjct: 95 LPTTPQTPKTPKRTIQIVTPKSLNRTCNPVPF 126
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1379
Score = 27.1 bits (57), Expect = 2.3
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 437 PK*KSRNSISVHSRLSENSLKTSTKQKHVWMSLCTTQDTP 556
P K + S S S SL T+ QKH+ S+ T D P
Sbjct: 856 PMKKKLSHSSASSTRSIKSLLTNANQKHIHSSINETDDIP 895
>SPAC824.05 |vps16||HOPS complex subunit Vps16 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 835
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 367 IMACRNMDAAEKVKTEIIETTRNTKIEVKKLDLSSFASIREFAKDINKTEARLDVLVHNA 546
+M NM+A E+ ++IET N I L + +I F + +N+ + V V A
Sbjct: 545 VMLLLNMEAYEQALKKVIETMDNNLIIYVVLQIKQQMAIASFFQILNEYPDAVKVYVEFA 604
>SPBC27.05 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 108
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -2
Query: 512 VLLMSLANSLIDANELRSSFLTSIL--VFLVVSMISVLTFSAASIFLQAIMTR 360
V+ S+ N+ + NE +L I +FL+ S+I + +F A +FL M +
Sbjct: 58 VITSSIYNTFNNTNE--HMYLQPICNRIFLMTSIIDIASFKAQVLFLNIFMIK 108
>SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 25.4 bits (53), Expect = 7.1
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 283 GKTVIVTGCTSGIGKETARELAQRGARVIMA-CRNMDAAEKVKTEIIETTRNTKIEVKKL 459
GK +V G +GK + L +GARVI+ ++A + TT ++ ++
Sbjct: 214 GKVAVVAGF-GDVGKGCSTSLRSQGARVIVTEVDPINALQAAMDGFEVTTMEEAVKEGQI 272
Query: 460 DLSSFASIREFAKDINKTEARLDVLVHNAGY 552
+++ R+ + + E + D +V N G+
Sbjct: 273 FVTT-TGCRDIIRGEHFNEMKEDSIVCNIGH 302
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 477 VYQRIR*RHQQNRSTSGCPCAQRRIRRN 560
VY+R+R H Q+ STS P + N
Sbjct: 314 VYERLRASHTQSNSTSALPEEDASVTEN 341
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,443,030
Number of Sequences: 5004
Number of extensions: 48301
Number of successful extensions: 179
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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