Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27h18
(336 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC409.03 |swi5||Swi5 protein|Schizosaccharomyces pombe|chr 2||... 28 0.33
SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase |Schiz... 26 1.3
SPBC651.06 |mug166||sequence orphan|Schizosaccharomyces pombe|ch... 25 3.1
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 25 3.1
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 25 3.1
SPBP8B7.08c |||leucine carboxyl methyltransferase |Schizosacchar... 25 4.1
SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces pom... 24 7.1
SPCC16C4.11 |pef1||Pho85/PhoA-like cyclin-dependent kinase Pef1|... 24 7.1
SPBC19F8.07 |crk1|mop1, mcs6|cyclin-dependent kinase activating ... 24 7.1
SPAPB8E5.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 7.1
SPCC285.05 |||purine nucleoside transporter |Schizosaccharomyces... 24 7.1
SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7 |Schizos... 23 9.4
SPACUNK4.17 |||NAD binding dehydrogenase family protein|Schizosa... 23 9.4
SPAC2F3.08 |sut1||alpha-glucoside transporter |Schizosaccharomyc... 23 9.4
SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|ch... 23 9.4
>SPBC409.03 |swi5||Swi5 protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 85
Score = 28.3 bits (60), Expect = 0.33
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 133 YVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKY 252
++LEQ Q++ +D + LK + K V +H+D + Y
Sbjct: 11 HLLEQQKEQLESSLQDALAKLKNRDAKQTVQKHIDLLHTY 50
>SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 499
Score = 26.2 bits (55), Expect = 1.3
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +1
Query: 196 KYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDP 321
KY CK +S +Y + +S +P +AP+ + + P
Sbjct: 172 KYAGCKIDISTFEQSRYPRVFVDSQLPVPKAAPSPIEEWYPP 213
>SPBC651.06 |mug166||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 234
Score = 25.0 bits (52), Expect = 3.1
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +1
Query: 187 SSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVA 306
+++ Y +C A RH SE+G P S N ++
Sbjct: 154 TAVPYDSCLPAPDRHTPSSASSRASETGTTSPQSMRNQIS 193
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.0 bits (52), Expect = 3.1
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = -2
Query: 326 YSGSPCFATLFGAEGGSLAPDSLYVYLYFLSTCLLTASLQFPYFKLLAMSLATNLTCGFP 147
Y+GS T G P ++YV + +T T ++ +P S+ T LT G P
Sbjct: 248 YTGSTTLTTTVPHSGNETGPTTVYVETPYPTTVTTTTTVGYP------GSVTTTLT-GAP 300
Query: 146 CSSTYL 129
+ T +
Sbjct: 301 SNGTVI 306
Score = 25.0 bits (52), Expect = 3.1
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = -2
Query: 326 YSGSPCFATLFGAEGGSLAPDSLYVYLYFLSTCLLTASLQFPYFKLLAMSLATNLTCGFP 147
Y+GS T G P ++YV + +T T ++ +P S+ T LT G P
Sbjct: 326 YTGSTTLTTTVPHSGNETGPTTVYVETPYPTTVTTTTTVGYP------GSVTTTLT-GAP 378
Query: 146 CSSTYL 129
+ T +
Sbjct: 379 SNGTVI 384
Score = 25.0 bits (52), Expect = 3.1
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = -2
Query: 326 YSGSPCFATLFGAEGGSLAPDSLYVYLYFLSTCLLTASLQFPYFKLLAMSLATNLTCGFP 147
Y+GS T G P ++YV + +T T ++ +P S+ T LT G P
Sbjct: 404 YTGSTTLTTTVPHSGNETGPTTVYVETPYPTTVTTTTTVGYP------GSVTTTLT-GAP 456
Query: 146 CSSTYL 129
+ T +
Sbjct: 457 SNGTVI 462
Score = 25.0 bits (52), Expect = 3.1
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = -2
Query: 326 YSGSPCFATLFGAEGGSLAPDSLYVYLYFLSTCLLTASLQFPYFKLLAMSLATNLTCGFP 147
Y+GS T G P ++YV + +T T ++ +P S+ T LT G P
Sbjct: 482 YTGSTTLTTTVPHSGNETGPTTVYVETPYPTTVTTTTTVGYP------GSVTTTLT-GAP 534
Query: 146 CSSTYL 129
+ T +
Sbjct: 535 SNGTVI 540
Score = 25.0 bits (52), Expect = 3.1
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = -2
Query: 326 YSGSPCFATLFGAEGGSLAPDSLYVYLYFLSTCLLTASLQFPYFKLLAMSLATNLTCGFP 147
Y+GS T G P ++YV + +T T ++ +P S+ T LT G P
Sbjct: 560 YTGSTTLTTTVPHSGNETGPTTVYVETPYPTTVTTTTTVGYP------GSVTTTLT-GAP 612
Query: 146 CSSTYL 129
+ T +
Sbjct: 613 SNGTVI 618
>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1316
Score = 25.0 bits (52), Expect = 3.1
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 247 KYTYSESGARLPPSAPNSVAKQGDPLYLQP 336
+Y Y ARLP AP AK G ++P
Sbjct: 83 RYRYLNKYARLPHEAPIKEAKLGPDTNIRP 112
>SPBP8B7.08c |||leucine carboxyl methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 310
Score = 24.6 bits (51), Expect = 4.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 109 GQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNC 210
G DT RY+ E G +KF+ D Y NC
Sbjct: 77 GTDTRVFRYISEYGPENLKFIEFDF-----YPNC 105
>SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 437
Score = 23.8 bits (49), Expect = 7.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 176 LATNLTCGFPCSSTYLSVNVSWPNLNC 96
LA NL C P + L NVS+ + C
Sbjct: 2 LARNLRCLHPNTFASLKTNVSYHGVKC 28
>SPCC16C4.11 |pef1||Pho85/PhoA-like cyclin-dependent kinase
Pef1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 288
Score = 23.8 bits (49), Expect = 7.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 238 KKYKYTYSESGARLPPSAPNSVAKQ 312
KKY TY GA LPPS + +Q
Sbjct: 86 KKYMDTYGNQGA-LPPSQVKNFTQQ 109
>SPBC19F8.07 |crk1|mop1, mcs6|cyclin-dependent kinase activating
kinase Crk1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 23.8 bits (49), Expect = 7.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 70 IKMAQVKIGQFKFGQDTFTLRYV 138
+ + ++K+GQFK G D LR +
Sbjct: 37 VAIKKIKVGQFKDGIDISALREI 59
>SPAPB8E5.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 103
Score = 23.8 bits (49), Expect = 7.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 263 SLYVYLYFLSTCLLTASLQFPYFKL 189
S+Y+Y+YF L + F Y L
Sbjct: 78 SIYIYIYFFFYSFLCSPYLFKYISL 102
>SPCC285.05 |||purine nucleoside transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 348
Score = 23.8 bits (49), Expect = 7.1
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +1
Query: 211 KDAVSRHVDK--KYKYTYSESGARLPPSAPNSVAKQGD 318
KD V +K Y+ Y+ES AR PP GD
Sbjct: 201 KDVVLEDNEKAASYRKLYNESAARRPPFITQCDTATGD 238
>SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 721
Score = 23.4 bits (48), Expect = 9.4
Identities = 11/47 (23%), Positives = 27/47 (57%)
Frame = +1
Query: 112 QDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKY 252
+ +FTL+ ++E G + + DIA +L++ + + +++ Y+Y
Sbjct: 386 ETSFTLQALVESGLYEKEAFKPDIAKALEFLDRQQIRTQYEGSGYRY 432
>SPACUNK4.17 |||NAD binding dehydrogenase family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 405
Score = 23.4 bits (48), Expect = 9.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 180 VLGHKLDLRVSLLEHVPQRKRVLAEFELPDFNLSHFN 70
VLGH+L + L H +RVL + ++ S+ N
Sbjct: 63 VLGHRLQVVALLSPHKSSHERVLKQKAETEYASSYAN 99
>SPAC2F3.08 |sut1||alpha-glucoside transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 553
Score = 23.4 bits (48), Expect = 9.4
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 290 LQTAWQSKAIRCIC 331
LQT+WQ++A+ IC
Sbjct: 445 LQTSWQAQAMVAIC 458
>SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 546
Score = 23.4 bits (48), Expect = 9.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 214 DAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQ 312
D +S KK++ YS+ G+R + N + KQ
Sbjct: 2 DLLSLITGKKFEKHYSKVGSRFSDESLNGLEKQ 34
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,361,429
Number of Sequences: 5004
Number of extensions: 25921
Number of successful extensions: 106
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 95984434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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