Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27h18
         (336 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4234|AAF56792.1|  421|Drosophila melanogaster CG1894-PA...    31   0.37 
AY058569-1|AAL13798.1| 1472|Drosophila melanogaster LD25641p pro...    27   8.0  
AE014298-3011|AAF50912.1|  302|Drosophila melanogaster CG15459-P...    27   8.0  
AE014298-2781|AAF48895.2| 1868|Drosophila melanogaster CG7282-PA...    27   8.0  

>AE014297-4234|AAF56792.1|  421|Drosophila melanogaster CG1894-PA
           protein.
          Length = 421

 Score = 31.1 bits (67), Expect = 0.37
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -3

Query: 289 PRAVVSPPTRCTYICIFYPR-VCLQRLYNFHILNC-WRCP 176
           P  V++      Y+C F  + +CL++ Y++H+ +C  RCP
Sbjct: 163 PYPVINDKATTIYVCEFCLKYMCLRKSYSYHLYDCKKRCP 202


>AY058569-1|AAL13798.1| 1472|Drosophila melanogaster LD25641p
           protein.
          Length = 1472

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = +1

Query: 163 KFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQP 336
           K+ +  +   L  G  K +V +HV KK +    +SG     +A +S A Q    + +P
Sbjct: 183 KYTSVIVEKPLTIGG-KKSVEQHVPKKAELLKKQSGGAGGTAASSSAASQESKKFAEP 239


>AE014298-3011|AAF50912.1|  302|Drosophila melanogaster CG15459-PA
           protein.
          Length = 302

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +3

Query: 81  SS*NRAVQIRPGHVYAEVR---ARARKPASQVCGQGHRQQFKI 200
           SS  R  QI+P + Y + +   A   +PASQV GQ H   +++
Sbjct: 148 SSWARGQQIQPPNQYQQYKQPEAEQVRPASQVMGQVHDAFYRV 190


>AE014298-2781|AAF48895.2| 1868|Drosophila melanogaster CG7282-PA
           protein.
          Length = 1868

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = +1

Query: 163 KFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQP 336
           K+ +  +   L  G  K +V +HV KK +    +SG     +A +S A Q    + +P
Sbjct: 579 KYTSVIVEKPLTIGG-KKSVEQHVPKKAELLKKQSGGAGGTAASSSAASQESKKFAEP 635


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,000,553
Number of Sequences: 53049
Number of extensions: 288768
Number of successful extensions: 817
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)