Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27h18
(336 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.3
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 1.7
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 1.7
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 3.0
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 3.0
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 3.0
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 3.0
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 5.3
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 5.3
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 20 7.0
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 20 7.0
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 20 7.0
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 20 7.0
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 20 9.2
M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee preprosec... 20 9.2
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 20 9.2
AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein. 20 9.2
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 1.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 8/31 (25%)
Frame = -2
Query: 155 GFPCSSTYLSVNVS--------WPNLNCPIL 87
G P ++T+LS N + WP+ CPIL
Sbjct: 1500 GIPPAATFLSPNSTTLVLRLHVWPDNGCPIL 1530
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 1.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 8/31 (25%)
Frame = -2
Query: 155 GFPCSSTYLSVNVS--------WPNLNCPIL 87
G P ++T+LS N + WP+ CPIL
Sbjct: 1496 GIPPAATFLSPNSTTLVLRLHVWPDNGCPIL 1526
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.2 bits (45), Expect = 1.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 90 NRAVQIRPGHVYAEVRARARKPASQVC 170
NR +I VR R PASQVC
Sbjct: 603 NRIARIFDSASRTAVRPRYISPASQVC 629
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.2 bits (45), Expect = 1.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 90 NRAVQIRPGHVYAEVRARARKPASQVC 170
NR +I VR R PASQVC
Sbjct: 693 NRIARIFDSASRTAVRPRYISPASQVC 719
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 3.0
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 5/27 (18%)
Frame = -1
Query: 108 EFELPDFN-----LSHFNLLN*IYLQR 43
E++LPD+ SH LLN YL+R
Sbjct: 248 EYDLPDYRGEEYLYSHKLLLNRYYLER 274
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 3.0
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 5/27 (18%)
Frame = -1
Query: 108 EFELPDFN-----LSHFNLLN*IYLQR 43
E++LPD+ SH LLN YL+R
Sbjct: 248 EYDLPDYRGEEYLYSHKLLLNRYYLER 274
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.4 bits (43), Expect = 3.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 240 KIQIYVQRVGGETTALGSKQRGKARRSAV 326
+I +YV RV T + QRG +R V
Sbjct: 79 RIPLYVCRVLHTTVWVAGAQRGNEQRCTV 107
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 3.0
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = -3
Query: 319 DRLALPRCLEPRAVVSPPTRCTYICIFYPRVCLQRLY 209
DR R EP+ + S C Y +Y ++LY
Sbjct: 291 DRRERERSKEPKIISSLSNSCNYSNNYYNNNNYKKLY 327
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 20.6 bits (41), Expect = 5.3
Identities = 10/42 (23%), Positives = 19/42 (45%)
Frame = +1
Query: 139 LEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSE 264
+ GN + V + I + KY +D + R ++ + Y E
Sbjct: 7 MSDGNIHMSDVIEVIETDTKYNGREDQIPREMNTERLLPYVE 48
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 20.6 bits (41), Expect = 5.3
Identities = 10/42 (23%), Positives = 19/42 (45%)
Frame = +1
Query: 139 LEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSE 264
+ GN + V + I + KY +D + R ++ + Y E
Sbjct: 7 MSDGNIHMSDVIEVIETDTKYNGREDQIPREMNTERLLPYVE 48
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 20.2 bits (40), Expect = 7.0
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -2
Query: 296 FGAEGGSLAPDSLYVYLYFLSTCLLTASLQF 204
+ E + +P S+Y +L L+ +++SLQ+
Sbjct: 466 YNVELHNSSPFSIYSFLERLNLIFMSSSLQW 496
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 20.2 bits (40), Expect = 7.0
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -2
Query: 296 FGAEGGSLAPDSLYVYLYFLSTCLLTASLQF 204
+ E + +P S+Y +L L+ +++SLQ+
Sbjct: 504 YNVELHNSSPFSIYSFLERLNLIFMSSSLQW 534
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 20.2 bits (40), Expect = 7.0
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -2
Query: 311 CFATLFGAEGGS 276
C+AT++ EGG+
Sbjct: 259 CWATIYKTEGGN 270
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 20.2 bits (40), Expect = 7.0
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -2
Query: 311 CFATLFGAEGGS 276
C+AT++ EGG+
Sbjct: 259 CWATIYKTEGGN 270
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 19.8 bits (39), Expect = 9.2
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +3
Query: 135 RARARKPASQVCGQ 176
RAR +P++ CG+
Sbjct: 345 RARGNQPSTSECGE 358
>M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee
preprosecapin mRNA, complete cds. ).
Length = 77
Score = 19.8 bits (39), Expect = 9.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -3
Query: 292 EPRAVVSPPTRC 257
EPR ++ P RC
Sbjct: 50 EPRYIIDVPPRC 61
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 19.8 bits (39), Expect = 9.2
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +3
Query: 111 PGHVYAEVRARARKPASQVCGQGHRQQFKI 200
PG + EVR R S C G + +I
Sbjct: 132 PGRFFCEVRPIKRVKDSTNCNCGWKNPSRI 161
>AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein.
Length = 77
Score = 19.8 bits (39), Expect = 9.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -3
Query: 292 EPRAVVSPPTRC 257
EPR ++ P RC
Sbjct: 50 EPRYIIDVPPRC 61
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,714
Number of Sequences: 438
Number of extensions: 1795
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7591023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -