Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27h15
         (313 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK126902-1|BAC86743.1|  247|Homo sapiens protein ( Homo sapiens ...    29   3.8  
BX538342-1|CAD98105.1| 1122|Homo sapiens hypothetical protein pr...    28   5.0  

>AK126902-1|BAC86743.1|  247|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44954 fis, clone BRAWH2010364. ).
          Length = 247

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 18/58 (31%), Positives = 23/58 (39%)
 Frame = -2

Query: 312 CTLETSXX*SQHVNIFSPICQIYCNLACRPRRT*CAGPLYLLQKFCNIHLNSILHWHP 139
           C+L  S   S H    SP C + C+L C P  +    P   L +     L   LH  P
Sbjct: 106 CSLRCSPCCSLHC---SPCCSLQCSLHCSPHCSLHCSPCCFLHRSPCCSLQGSLHCSP 160


>BX538342-1|CAD98105.1| 1122|Homo sapiens hypothetical protein
           protein.
          Length = 1122

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +3

Query: 168 EYYKTFEANKVGQHTTYDVVGKRDYNKFDKLVKKY*HVAIXXTTFQE 308
           EY+K  + N VG  T      + +Y+K  K+ KKY H+ +  T F++
Sbjct: 623 EYFKN-KTNVVGLLTNSAEKFQINYDKHIKVNKKYNHIPMTLTVFEK 668


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,035,710
Number of Sequences: 237096
Number of extensions: 515990
Number of successful extensions: 876
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)