Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27h13
(426 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for ... 32 0.70
M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor pro... 32 0.70
M10321-1|AAB59512.1| 2074|Homo sapiens F8VWF protein. 32 0.70
AK074060-1|BAB84886.1| 173|Homo sapiens FLJ00131 protein protein. 32 0.70
BC012367-1|AAH12367.1| 176|Homo sapiens mal, T-cell differentia... 30 2.8
AY007723-1|AAG15576.1| 176|Homo sapiens MAL2 proteolipid protein. 30 2.8
AK172820-1|BAD18789.1| 220|Homo sapiens protein ( Homo sapiens ... 30 2.8
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 29 6.6
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 29 6.6
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 29 6.6
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 29 6.6
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 29 6.6
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 29 6.6
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 29 6.6
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 29 6.6
>X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for
pre-pro-von Willebrand factor. ).
Length = 2813
Score = 32.3 bits (70), Expect = 0.70
Identities = 21/76 (27%), Positives = 31/76 (40%)
Frame = +3
Query: 156 FVAKDIASSLKYVNCERAIRVHVDGKYKSTFEHADQIQHHAPDSVAKQGDPLYLHPHTVL 335
F A SL Y +CE H DG S +H + PD V +G + T
Sbjct: 2198 FCAMSCPPSLVYNHCEHGCPRHCDGNVSSCGDHPSEGCFCPPDKVMLEGSCVPEEACTQC 2257
Query: 336 ITKSGVIQLIMKSKLP 383
I + GV +++ +P
Sbjct: 2258 IGEDGVQHQFLEAWVP 2273
>M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor protein.
Length = 2813
Score = 32.3 bits (70), Expect = 0.70
Identities = 21/76 (27%), Positives = 31/76 (40%)
Frame = +3
Query: 156 FVAKDIASSLKYVNCERAIRVHVDGKYKSTFEHADQIQHHAPDSVAKQGDPLYLHPHTVL 335
F A SL Y +CE H DG S +H + PD V +G + T
Sbjct: 2198 FCAMSCPPSLVYNHCEHGCPRHCDGNVSSCGDHPSEGCFCPPDKVMLEGSCVPEEACTQC 2257
Query: 336 ITKSGVIQLIMKSKLP 383
I + GV +++ +P
Sbjct: 2258 IGEDGVQHQFLEAWVP 2273
>M10321-1|AAB59512.1| 2074|Homo sapiens F8VWF protein.
Length = 2074
Score = 32.3 bits (70), Expect = 0.70
Identities = 21/76 (27%), Positives = 31/76 (40%)
Frame = +3
Query: 156 FVAKDIASSLKYVNCERAIRVHVDGKYKSTFEHADQIQHHAPDSVAKQGDPLYLHPHTVL 335
F A SL Y +CE H DG S +H + PD V +G + T
Sbjct: 1459 FCAMSCPPSLVYNHCEHGCPRHCDGNVSSCGDHPSEGCFCPPDKVMLEGSCVPEEACTQC 1518
Query: 336 ITKSGVIQLIMKSKLP 383
I + GV +++ +P
Sbjct: 1519 IGEDGVQHQFLEAWVP 1534
>AK074060-1|BAB84886.1| 173|Homo sapiens FLJ00131 protein protein.
Length = 173
Score = 32.3 bits (70), Expect = 0.70
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 313 YSGSPCFATLSGAWCWIWSACS 248
YS S CFA++SG WC + CS
Sbjct: 2 YSRSCCFASVSGGWCLVKGDCS 23
>BC012367-1|AAH12367.1| 176|Homo sapiens mal, T-cell
differentiation protein 2 protein.
Length = 176
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -3
Query: 313 YSGS-PCFATLSGAWCWIWSACSNVDLYLPSTWTRIARSQFTYFKLLAMSL 164
YSG+ C L G WI A SNV L L W +F LL + +
Sbjct: 35 YSGAFVCLEILFGGLVWILVASSNVPLPLLQGWVMFVSVTAFFFSLLFLGM 85
>AY007723-1|AAG15576.1| 176|Homo sapiens MAL2 proteolipid protein.
Length = 176
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -3
Query: 313 YSGS-PCFATLSGAWCWIWSACSNVDLYLPSTWTRIARSQFTYFKLLAMSL 164
YSG+ C L G WI A SNV L L W +F LL + +
Sbjct: 35 YSGAFVCLEILFGGLVWILVASSNVPLPLLQGWVMFVSVTAFFFSLLFLGM 85
>AK172820-1|BAD18789.1| 220|Homo sapiens protein ( Homo sapiens
cDNA FLJ23981 fis, clone HEP20958. ).
Length = 220
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -3
Query: 313 YSGS-PCFATLSGAWCWIWSACSNVDLYLPSTWTRIARSQFTYFKLLAMSL 164
YSG+ C L G WI A SNV L L W +F LL + +
Sbjct: 35 YSGAFVCLEILFGGLVWILVASSNVPLPLLQGWVMFVSVTAFFFSLLFLGM 85
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 403 SCNSMA*GNLDFIIS*ITPDLVMSTVCGC--KYSGSPCFATLSGAWCWIWSACSNVDLYL 230
+CN G+LDF + V + C C K+SG+ C G W + C+ D +L
Sbjct: 1059 ACNCSTVGSLDFQCN------VNTGQCNCHPKFSGAKCTECSRGHWNY--PRCNLCDCFL 1110
Query: 229 PST 221
P T
Sbjct: 1111 PGT 1113
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain protein.
Length = 3110
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 403 SCNSMA*GNLDFIIS*ITPDLVMSTVCGC--KYSGSPCFATLSGAWCWIWSACSNVDLYL 230
+CN G+LDF + V + C C K+SG+ C G W + C+ D +L
Sbjct: 1059 ACNCSTVGSLDFQCN------VNTGQCNCHPKFSGAKCTECSRGHWNY--PRCNLCDCFL 1110
Query: 229 PST 221
P T
Sbjct: 1111 PGT 1113
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 403 SCNSMA*GNLDFIIS*ITPDLVMSTVCGC--KYSGSPCFATLSGAWCWIWSACSNVDLYL 230
+CN G+LDF + V + C C K+SG+ C G W + C+ D +L
Sbjct: 1059 ACNCSTVGSLDFQCN------VNTGQCNCHPKFSGAKCTECSRGHWNY--PRCNLCDCFL 1110
Query: 229 PST 221
P T
Sbjct: 1111 PGT 1113
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 403 SCNSMA*GNLDFIIS*ITPDLVMSTVCGC--KYSGSPCFATLSGAWCWIWSACSNVDLYL 230
+CN G+LDF + V + C C K+SG+ C G W + C+ D +L
Sbjct: 1059 ACNCSTVGSLDFQCN------VNTGQCNCHPKFSGAKCTECSRGHWNY--PRCNLCDCFL 1110
Query: 229 PST 221
P T
Sbjct: 1111 PGT 1113
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 403 SCNSMA*GNLDFIIS*ITPDLVMSTVCGC--KYSGSPCFATLSGAWCWIWSACSNVDLYL 230
+CN G+LDF + V + C C K+SG+ C G W + C+ D +L
Sbjct: 1059 ACNCSTVGSLDFQCN------VNTGQCNCHPKFSGAKCTECSRGHWNY--PRCNLCDCFL 1110
Query: 229 PST 221
P T
Sbjct: 1111 PGT 1113
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 403 SCNSMA*GNLDFIIS*ITPDLVMSTVCGC--KYSGSPCFATLSGAWCWIWSACSNVDLYL 230
+CN G+LDF + V + C C K+SG+ C G W + C+ D +L
Sbjct: 1059 ACNCSTVGSLDFQCN------VNTGQCNCHPKFSGAKCTECSRGHWNY--PRCNLCDCFL 1110
Query: 229 PST 221
P T
Sbjct: 1111 PGT 1113
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 403 SCNSMA*GNLDFIIS*ITPDLVMSTVCGC--KYSGSPCFATLSGAWCWIWSACSNVDLYL 230
+CN G+LDF + V + C C K+SG+ C G W + C+ D +L
Sbjct: 1059 ACNCSTVGSLDFQCN------VNTGQCNCHPKFSGAKCTECSRGHWNY--PRCNLCDCFL 1110
Query: 229 PST 221
P T
Sbjct: 1111 PGT 1113
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 403 SCNSMA*GNLDFIIS*ITPDLVMSTVCGC--KYSGSPCFATLSGAWCWIWSACSNVDLYL 230
+CN G+LDF + V + C C K+SG+ C G W + C+ D +L
Sbjct: 1059 ACNCSTVGSLDFQCN------VNTGQCNCHPKFSGAKCTECSRGHWNY--PRCNLCDCFL 1110
Query: 229 PST 221
P T
Sbjct: 1111 PGT 1113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,118,373
Number of Sequences: 237096
Number of extensions: 1341427
Number of successful extensions: 2711
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2711
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -