Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27h13
         (426 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3561|AAN11140.1|  600|Drosophila melanogaster CG31601-P...    30   1.5  
AE014296-3058|AAF49230.1|  814|Drosophila melanogaster CG14073-P...    28   4.5  
AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P...    28   4.5  
M81796-1|AAA28736.1|  974|Drosophila melanogaster optomotor-blin...    28   6.0  
BT011407-1|AAR96199.1|  669|Drosophila melanogaster AT20168p pro...    27   7.9  
AY069106-1|AAL39251.1|  763|Drosophila melanogaster GH12404p pro...    27   7.9  
AE014297-450|ABI31144.1|  669|Drosophila melanogaster CG33097-PB...    27   7.9  
AE014297-449|AAF54130.2|  763|Drosophila melanogaster CG33097-PA...    27   7.9  

>AE014134-3561|AAN11140.1|  600|Drosophila melanogaster CG31601-PA
           protein.
          Length = 600

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1

Query: 282 LEHGAGFGRHAQTSICTCRRRGHVLPVHNLHILNCWRCPWPQ 157
           LE G  FG   + S  T ++  + +P+   HI NC  C W Q
Sbjct: 238 LEDGELFGEDNEVSSNTIKKEDNRMPICRYHIRNC--CIWGQ 277


>AE014296-3058|AAF49230.1|  814|Drosophila melanogaster CG14073-PA,
           isoform A protein.
          Length = 814

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +1

Query: 142 SSQSDLWPRTSPAV*NM*IVNGQYVSTSTASTNRRLSMPTKSSTMLQIAWQSRAT 306
           +S+ D  P++   V ++ + NG     STA T R++S+   +ST LQI  ++  T
Sbjct: 148 ASKQDFTPKSIIDVLHLRVTNG-----STAGTQRKISVSAPASTNLQIHSETSQT 197


>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
            isoform B protein.
          Length = 2133

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +1

Query: 142  SSQSDLWPRTSPAV*NM*IVNGQYVSTSTASTNRRLSMPTKSSTMLQIAWQSRAT 306
            +S+ D  P++   V ++ + NG     STA T R++S+   +ST LQI  ++  T
Sbjct: 1430 ASKQDFTPKSIIDVLHLRVTNG-----STAGTQRKISVSAPASTNLQIHSETSQT 1479


>M81796-1|AAA28736.1|  974|Drosophila melanogaster optomotor-blind
           protein.
          Length = 974

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 16/67 (23%), Positives = 23/67 (34%)
 Frame = +3

Query: 138 DEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTFEHADQIQHHAPDSVAKQGDPLYL 317
           D  P     +D  +  +  NC R   +   G               AP  +   G P +L
Sbjct: 503 DNNPFAKGLRDTGAGKREKNCYRQALMSNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHL 562

Query: 318 HPHTVLI 338
           HPH  L+
Sbjct: 563 HPHAALL 569


>BT011407-1|AAR96199.1|  669|Drosophila melanogaster AT20168p
           protein.
          Length = 669

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 274 WCWIWSACSNVDLYLPSTWTRI 209
           WC +W+  S V  Y PST T +
Sbjct: 443 WCVVWTGDSRVFFYNPSTRTSV 464


>AY069106-1|AAL39251.1|  763|Drosophila melanogaster GH12404p
           protein.
          Length = 763

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 274 WCWIWSACSNVDLYLPSTWTRI 209
           WC +W+  S V  Y PST T +
Sbjct: 443 WCVVWTGDSRVFFYNPSTRTSV 464


>AE014297-450|ABI31144.1|  669|Drosophila melanogaster CG33097-PB,
           isoform B protein.
          Length = 669

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 274 WCWIWSACSNVDLYLPSTWTRI 209
           WC +W+  S V  Y PST T +
Sbjct: 443 WCVVWTGDSRVFFYNPSTRTSV 464


>AE014297-449|AAF54130.2|  763|Drosophila melanogaster CG33097-PA,
           isoform A protein.
          Length = 763

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 274 WCWIWSACSNVDLYLPSTWTRI 209
           WC +W+  S V  Y PST T +
Sbjct: 443 WCVVWTGDSRVFFYNPSTRTSV 464


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,322,273
Number of Sequences: 53049
Number of extensions: 441781
Number of successful extensions: 1169
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)