Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27h07
(344 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ628245-1|CAF31637.1| 177|Homo sapiens keratin associated prot... 29 5.2
AB126071-1|BAD20198.1| 177|Homo sapiens keratin associated prot... 29 5.2
Y12476-1|CAA73080.1| 613|Homo sapiens G protein coupled recepto... 28 6.8
U87460-1|AAC51281.1| 613|Homo sapiens putative endothelin recep... 28 6.8
BC040007-1|AAH40007.1| 613|Homo sapiens G protein-coupled recep... 28 6.8
AF502281-1|AAM18625.2| 613|Homo sapiens Parkin-associated endot... 28 6.8
AF017262-1|AAB70008.1| 613|Homo sapiens putative G protein-coup... 28 6.8
AC004925-2|AAD08853.1| 613|Homo sapiens unknown protein. 28 6.8
BC125187-1|AAI25188.1| 486|Homo sapiens amyloid beta (A4) precu... 28 9.0
BC013158-1|AAH13158.1| 486|Homo sapiens amyloid beta (A4) precu... 28 9.0
AY656810-1|AAT72343.1| 193|Homo sapiens H2B/t variant protein. 28 9.0
AY648853-1|AAT68256.1| 164|Homo sapiens histone H2B/s protein. 28 9.0
AF224711-1|AAF65175.1| 493|Homo sapiens amyloid precursor inter... 28 9.0
AF224710-1|AAF65174.1| 484|Homo sapiens amyloid precursor inter... 28 9.0
AF224709-1|AAF65173.1| 486|Homo sapiens amyloid precursor inter... 28 9.0
AF224708-1|AAF65172.1| 491|Homo sapiens amyloid precursor inter... 28 9.0
AB209839-1|BAD93076.1| 515|Homo sapiens amyloid beta precursor ... 28 9.0
AB094990-1|BAC22578.1| 484|Homo sapiens Alzheimer's beta-amyloi... 28 9.0
AB024745-1|BAA78674.1| 486|Homo sapiens Fe65L2 protein. 28 9.0
AB018247-1|BAA35188.1| 486|Homo sapiens Fe65L2 protein. 28 9.0
>AJ628245-1|CAF31637.1| 177|Homo sapiens keratin associated protein
5-8 protein.
Length = 177
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -3
Query: 330 CRQPSHCILC*AASFCRS**FPAFCCE--CPQSQ--LHVCCSAAP*TPC 196
C Q S C C +S C S + CC+ C QS + VCC ++ PC
Sbjct: 113 CSQSSCCKPCCCSSGCGSSCCQSSCCKPCCCQSSCCVPVCCQSSCCKPC 161
>AB126071-1|BAD20198.1| 177|Homo sapiens keratin associated protein
protein.
Length = 177
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -3
Query: 330 CRQPSHCILC*AASFCRS**FPAFCCE--CPQSQ--LHVCCSAAP*TPC 196
C Q S C C +S C S + CC+ C QS + VCC ++ PC
Sbjct: 113 CSQSSCCKPCCCSSGCGSSCCQSSCCKPCCCQSSCCVPVCCQSSCCKPC 161
>Y12476-1|CAA73080.1| 613|Homo sapiens G protein coupled receptor
37 protein.
Length = 613
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 179 RRSARLQGVHGAALQQTCN*LCGH 250
RR+ +LQG H L +T N L GH
Sbjct: 184 RRAGKLQGSHHKPLSKTANGLAGH 207
>U87460-1|AAC51281.1| 613|Homo sapiens putative endothelin receptor
type B-like protein protein.
Length = 613
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 179 RRSARLQGVHGAALQQTCN*LCGH 250
RR+ +LQG H L +T N L GH
Sbjct: 184 RRAGKLQGSHHKPLSKTANGLAGH 207
>BC040007-1|AAH40007.1| 613|Homo sapiens G protein-coupled receptor
37 (endothelin receptor type B-like) protein.
Length = 613
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 179 RRSARLQGVHGAALQQTCN*LCGH 250
RR+ +LQG H L +T N L GH
Sbjct: 184 RRAGKLQGSHHKPLSKTANGLAGH 207
>AF502281-1|AAM18625.2| 613|Homo sapiens Parkin-associated
endothelin receptor-like receptor protein.
Length = 613
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 179 RRSARLQGVHGAALQQTCN*LCGH 250
RR+ +LQG H L +T N L GH
Sbjct: 184 RRAGKLQGSHHKPLSKTANGLAGH 207
>AF017262-1|AAB70008.1| 613|Homo sapiens putative G protein-coupled
receptor protein.
Length = 613
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 179 RRSARLQGVHGAALQQTCN*LCGH 250
RR+ +LQG H L +T N L GH
Sbjct: 184 RRAGKLQGSHHKPLSKTANGLAGH 207
>AC004925-2|AAD08853.1| 613|Homo sapiens unknown protein.
Length = 613
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 179 RRSARLQGVHGAALQQTCN*LCGH 250
RR+ +LQG H L +T N L GH
Sbjct: 184 RRAGKLQGSHHKPLSKTANGLAGH 207
>BC125187-1|AAI25188.1| 486|Homo sapiens amyloid beta (A4)
precursor protein-binding, family B, member 3 protein.
Length = 486
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -2
Query: 175 ESYSGGSERAKTRSACVLTRPSCMLLSAAVGVNWNRNSVGNF*FRRTT 32
+ ++GG A ++AC++ C++ SAA G W + +RT+
Sbjct: 393 QPHAGGLSEA-VQAACMVQYQKCLVASAARGKAWGAQARARLRLKRTS 439
>BC013158-1|AAH13158.1| 486|Homo sapiens amyloid beta (A4)
precursor protein-binding, family B, member 3 protein.
Length = 486
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -2
Query: 175 ESYSGGSERAKTRSACVLTRPSCMLLSAAVGVNWNRNSVGNF*FRRTT 32
+ ++GG A ++AC++ C++ SAA G W + +RT+
Sbjct: 393 QPHAGGLSEA-VQAACMVQYQKCLVASAARGKAWGAQARARLRLKRTS 439
>AY656810-1|AAT72343.1| 193|Homo sapiens H2B/t variant protein.
Length = 193
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -3
Query: 225 CCSAA-P*TPCSRADRRSSRT 166
CC A+ P TPC RA RRS T
Sbjct: 102 CCPASWPSTPCPRAPRRSPST 122
>AY648853-1|AAT68256.1| 164|Homo sapiens histone H2B/s protein.
Length = 164
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -3
Query: 225 CCSAA-P*TPCSRADRRSSRT 166
CC A+ P TPC RA RRS T
Sbjct: 102 CCPASWPSTPCPRAPRRSPST 122
>AF224711-1|AAF65175.1| 493|Homo sapiens amyloid precursor
interacting protein type IV protein.
Length = 493
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -2
Query: 175 ESYSGGSERAKTRSACVLTRPSCMLLSAAVGVNWNRNSVGNF*FRRTT 32
+ ++GG A ++AC++ C++ SAA G W + +RT+
Sbjct: 400 QPHAGGLSEA-VQAACMVQYQKCLVASAARGKAWGAQARARLRLKRTS 446
>AF224710-1|AAF65174.1| 484|Homo sapiens amyloid precursor
interacting protein type I protein.
Length = 484
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -2
Query: 175 ESYSGGSERAKTRSACVLTRPSCMLLSAAVGVNWNRNSVGNF*FRRTT 32
+ ++GG A ++AC++ C++ SAA G W + +RT+
Sbjct: 391 QPHAGGLSEA-VQAACMVQYQKCLVASAARGKAWGAQARARLRLKRTS 437
>AF224709-1|AAF65173.1| 486|Homo sapiens amyloid precursor
interacting protein type II protein.
Length = 486
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -2
Query: 175 ESYSGGSERAKTRSACVLTRPSCMLLSAAVGVNWNRNSVGNF*FRRTT 32
+ ++GG A ++AC++ C++ SAA G W + +RT+
Sbjct: 393 QPHAGGLSEA-VQAACMVQYQKCLVASAARGKAWGAQARARLRLKRTS 439
>AF224708-1|AAF65172.1| 491|Homo sapiens amyloid precursor
interacting protein type III protein.
Length = 491
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -2
Query: 175 ESYSGGSERAKTRSACVLTRPSCMLLSAAVGVNWNRNSVGNF*FRRTT 32
+ ++GG A ++AC++ C++ SAA G W + +RT+
Sbjct: 398 QPHAGGLSEA-VQAACMVQYQKCLVASAARGKAWGAQARARLRLKRTS 444
>AB209839-1|BAD93076.1| 515|Homo sapiens amyloid beta precursor
protein-binding, family B, member 3 isoform b variant
protein.
Length = 515
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -2
Query: 175 ESYSGGSERAKTRSACVLTRPSCMLLSAAVGVNWNRNSVGNF*FRRTT 32
+ ++GG A ++AC++ C++ SAA G W + +RT+
Sbjct: 422 QPHAGGLSEA-VQAACMVQYQKCLVASAARGKAWGAQARARLRLKRTS 468
>AB094990-1|BAC22578.1| 484|Homo sapiens Alzheimer's beta-amyloid
precursor interaction protein protein.
Length = 484
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -2
Query: 175 ESYSGGSERAKTRSACVLTRPSCMLLSAAVGVNWNRNSVGNF*FRRTT 32
+ ++GG A ++AC++ C++ SAA G W + +RT+
Sbjct: 391 QPHAGGLSEA-VQAACMVQYQKCLVASAARGKAWGAQARARLRLKRTS 437
>AB024745-1|BAA78674.1| 486|Homo sapiens Fe65L2 protein.
Length = 486
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -2
Query: 175 ESYSGGSERAKTRSACVLTRPSCMLLSAAVGVNWNRNSVGNF*FRRTT 32
+ ++GG A ++AC++ C++ SAA G W + +RT+
Sbjct: 393 QPHAGGLSEA-VQAACMVQYQKCLVASAARGKAWGAQARARLRLKRTS 439
>AB018247-1|BAA35188.1| 486|Homo sapiens Fe65L2 protein.
Length = 486
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -2
Query: 175 ESYSGGSERAKTRSACVLTRPSCMLLSAAVGVNWNRNSVGNF*FRRTT 32
+ ++GG A ++AC++ C++ SAA G W + +RT+
Sbjct: 393 QPHAGGLSEA-VQAACMVQYQKCLVASAARGKAWGAQARARLRLKRTS 439
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,060,241
Number of Sequences: 237096
Number of extensions: 802277
Number of successful extensions: 2045
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2045
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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