Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27h04
(358 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical pr... 55 1e-08
U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical pr... 54 2e-08
Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical pr... 54 3e-08
Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical pr... 54 3e-08
Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical pr... 54 3e-08
X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP translo... 54 3e-08
Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical pr... 52 2e-07
U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical pr... 52 2e-07
AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical ... 51 2e-07
Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical pr... 42 1e-04
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 35 0.015
Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical pr... 33 0.059
Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical pr... 33 0.059
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 29 0.95
AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily a... 28 2.2
Z81553-2|CAB04491.2| 373|Caenorhabditis elegans Hypothetical pr... 27 2.9
U29154-2|AAA68418.2| 220|Caenorhabditis elegans Hypothetical pr... 27 2.9
Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein. 27 3.9
X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein... 27 3.9
U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation... 27 3.9
AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribo... 27 3.9
AC024200-15|AAF36011.1| 945|Caenorhabditis elegans Poly(adp-rib... 27 3.9
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 26 8.9
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 26 8.9
AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein. 26 8.9
>Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical
protein C47E12.2 protein.
Length = 306
Score = 55.2 bits (127), Expect = 1e-08
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +3
Query: 234 ADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 356
+D FA D L GG+SA+VSKT VAPIERVK+LLQVQ+ K
Sbjct: 16 SDAQKFAIDLLIGGVSASVSKTVVAPIERVKILLQVQYSHK 56
>U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical
protein F25B4.7 protein.
Length = 306
Score = 54.4 bits (125), Expect = 2e-08
Identities = 22/37 (59%), Positives = 32/37 (86%)
Frame = +3
Query: 237 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQH 347
D + F+KDF+AG +AA+SKT +AP+ERVKL+LQ+Q+
Sbjct: 14 DVIKFSKDFMAGATAAAISKTVIAPVERVKLILQLQN 50
>Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical
protein T27E9.1c protein.
Length = 207
Score = 54.0 bits (124), Expect = 3e-08
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +3
Query: 237 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 356
D F D +GG +AAVSKTAVAPIERVKLLLQVQ SK
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASK 47
>Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical
protein T27E9.1b protein.
Length = 128
Score = 54.0 bits (124), Expect = 3e-08
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +3
Query: 237 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 356
D F D +GG +AAVSKTAVAPIERVKLLLQVQ SK
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASK 47
>Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical
protein T27E9.1a protein.
Length = 300
Score = 54.0 bits (124), Expect = 3e-08
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +3
Query: 237 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 356
D F D +GG +AAVSKTAVAPIERVKLLLQVQ SK
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASK 47
>X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP
translocase protein.
Length = 300
Score = 54.0 bits (124), Expect = 3e-08
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +3
Query: 237 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 356
D F D +GG +AAVSKTAVAPIERVKLLLQVQ SK
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASK 47
>Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical
protein K01H12.2 protein.
Length = 313
Score = 51.6 bits (118), Expect = 2e-07
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 237 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS 353
D F D +GG +AAVSKTAVAPIERVKLLLQVQ S
Sbjct: 21 DTRKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDAS 59
>U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical
protein T01B11.4 protein.
Length = 313
Score = 51.6 bits (118), Expect = 2e-07
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 237 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS 353
D F D +GG +AAVSKTAVAPIERVKLLLQVQ S
Sbjct: 21 DTRKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDAS 59
>AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical
protein W02D3.6 protein.
Length = 300
Score = 51.2 bits (117), Expect = 2e-07
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +3
Query: 249 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 356
F D +GG +AA+SKTAVAPIERVKLLLQV VS+
Sbjct: 12 FLVDLASGGTAAAISKTAVAPIERVKLLLQVSDVSE 47
>Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical
protein R07E3.4 protein.
Length = 298
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +3
Query: 237 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 356
D + +K LAG +AA+SKT AP +RVKL+LQ+Q S+
Sbjct: 9 DVLETSKKCLAGSAAAAISKTTTAPFDRVKLVLQLQRQSE 48
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 35.1 bits (77), Expect = 0.015
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +3
Query: 255 KDFLAGGISAAVSKTAVAPIERVKLLLQV 341
+ +AGG++ A+S+T AP +R+K+ LQV
Sbjct: 246 RHLVAGGVAGAMSRTCTAPFDRIKVYLQV 274
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 264 LAGGISAAVSKTAVAPIERVKLLLQVQHVSK 356
LAG + A+S+TA+ P+E +K L ++ +
Sbjct: 345 LAGSSAGAISQTAIYPMEVMKTRLALRRTGQ 375
>Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical
protein C54G10.4b protein.
Length = 360
Score = 33.1 bits (72), Expect = 0.059
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 231 LADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 344
+ DP + F+ G + AP ER+KLLLQ+Q
Sbjct: 89 MEDPDSITSHFVGGCAAGMAQSVIAAPTERIKLLLQIQ 126
>Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical
protein C54G10.4a protein.
Length = 310
Score = 33.1 bits (72), Expect = 0.059
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 231 LADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 344
+ DP + F+ G + AP ER+KLLLQ+Q
Sbjct: 89 MEDPDSITSHFVGGCAAGMAQSVIAAPTERIKLLLQIQ 126
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 29.1 bits (62), Expect = 0.95
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 261 FLAGGISAAVSKTAVAPIERVKLLLQVQHVS 353
FL G ++ A TAV PI+ VK +Q Q S
Sbjct: 373 FLLGSVAGACGATAVYPIDLVKTRMQNQRTS 403
>AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily
assigned gene nameprotein 304 protein.
Length = 397
Score = 27.9 bits (59), Expect = 2.2
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 77 YPLCSRDYEITPNL-LFKNQELVFRDPPSACA-ATPTSTYSPSEDHIIEQNVE 229
YPL RD + PN L FR P A A P+ST SE H ++VE
Sbjct: 105 YPLMKRD-NVFPNFALPTTTRAAFRIGPQPIASADPSSTPGSSEHHSDTEDVE 156
>Z81553-2|CAB04491.2| 373|Caenorhabditis elegans Hypothetical
protein F56H6.2 protein.
Length = 373
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 75 PTLCAPVITKLLQISCSKIRS*CFVIPHPRVPQLPPRHI 191
PTL P + L + +C K+ S + P+LPP+ I
Sbjct: 89 PTLPVPTLRMLNEPTCQKVFSSWLKVSKEPQPKLPPKKI 127
>U29154-2|AAA68418.2| 220|Caenorhabditis elegans Hypothetical
protein T07F12.2 protein.
Length = 220
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 113 NLLFKNQELVFRDPPSACAATPTSTYSPS 199
N F+N E+V DP C A ++PS
Sbjct: 150 NKTFRNLEMVLADPVHGCEALRNEIFAPS 178
>Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein.
Length = 312
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 243 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 344
+ F ++ AG ++ + + P ER+K LLQVQ
Sbjct: 102 MTFIQNANAGALAGVFTTIVMVPGERIKCLLQVQ 135
>X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein
(c1) protein.
Length = 312
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 243 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 344
+ F ++ AG ++ + + P ER+K LLQVQ
Sbjct: 102 MTFIQNANAGALAGVFTTIVMVPGERIKCLLQVQ 135
>U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation
abnormal protein 1 protein.
Length = 312
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 243 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 344
+ F ++ AG ++ + + P ER+K LLQVQ
Sbjct: 102 MTFIQNANAGALAGVFTTIVMVPGERIKCLLQVQ 135
>AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-1 protein.
Length = 945
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 147 VIPHPRVPQLPPRHIHLVKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIE 317
+IPH ++P KI N M N + FA D ++GG A + + P++
Sbjct: 664 IIPHNFGMRVPEPIDSFHKIKEKNNMLNALLDIKFAYDQISGGDVPASTSLGIDPVD 720
>AC024200-15|AAF36011.1| 945|Caenorhabditis elegans
Poly(adp-ribose) metabolism enzymeprotein 1 protein.
Length = 945
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 147 VIPHPRVPQLPPRHIHLVKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIE 317
+IPH ++P KI N M N + FA D ++GG A + + P++
Sbjct: 664 IIPHNFGMRVPEPIDSFHKIKEKNNMLNALLDIKFAYDQISGGDVPASTSLGIDPVD 720
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 107 TPNLLFKNQELVFRDPPSACAATPTSTYSPSED 205
T +L+ +NQ R P+ AATPT++ +PS +
Sbjct: 73 TVHLVIRNQA---RPTPAPAAATPTASSAPSSN 102
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 107 TPNLLFKNQELVFRDPPSACAATPTSTYSPSED 205
T +L+ +NQ R P+ AATPT++ +PS +
Sbjct: 73 TVHLVIRNQA---RPTPAPAAATPTASSAPSSN 102
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 107 TPNLLFKNQELVFRDPPSACAATPTSTYSPSED 205
T +L+ +NQ R P+ AATPT++ +PS +
Sbjct: 73 TVHLVIRNQA---RPTPAPAAATPTASSAPSSN 102
>Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical
protein W05E10.3 protein.
Length = 439
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 322 TRSMGATAVLETAAEIPPARKSLANATGSARFDI 221
TRS+ L+ PP +K LANATG + +
Sbjct: 196 TRSLLREWYLKDPYPNPPKKKELANATGLTQMQV 229
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 107 TPNLLFKNQELVFRDPPSACAATPTSTYSPSED 205
T +L+ +NQ R P+ AATPT++ +PS +
Sbjct: 73 TVHLVIRNQA---RPTPAPAAATPTASSAPSSN 102
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 107 TPNLLFKNQELVFRDPPSACAATPTSTYSPSED 205
T +L+ +NQ R P+ AATPT++ +PS +
Sbjct: 73 TVHLVIRNQA---RPTPAPAAATPTASSAPSSN 102
>AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein.
Length = 439
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 322 TRSMGATAVLETAAEIPPARKSLANATGSARFDI 221
TRS+ L+ PP +K LANATG + +
Sbjct: 196 TRSLLREWYLKDPYPNPPKKKELANATGLTQMQV 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,053,770
Number of Sequences: 27780
Number of extensions: 163217
Number of successful extensions: 438
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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