Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27h01
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   5.7  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   7.5  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   10.0 
AY324311-1|AAQ89696.1|  158|Anopheles gambiae insulin-like pepti...    23   10.0 

>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 414 GSVTPQPQPGNPKPRVFRLP 473
           G + PQPQP  P  RV R P
Sbjct: 157 GDMMPQPQPARPY-RVRRAP 175


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = +2

Query: 440 RESQAEGLPTPGGRSCHQQIWLXQHRARRSIQKAGRNREGRNESGTPRR 586
           ++ Q +     G +   Q+    QH+ R +  +A R  + RNE   P R
Sbjct: 78  QQRQPQRQAVVGTQQQQQRRQQQQHQQRSNATQAQRREQLRNEQRRPAR 126


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
 Frame = -2

Query: 580 RSARFITAFSIPSSFLYTSSCPMLXKPYLLMTAPSSGSRK-TLGLGFPGCGCGVTEPTSM 404
           RS++  T+    SS    +S     +P    T P+ G    ++G    G     T PT  
Sbjct: 160 RSSKLYTSKGSSSSGNLGASGVPGAEPSRGSTPPTPGDDSDSMGASRHGKTPLATPPTKE 219

Query: 403 IEKPSFIRPTTASPCLSNPAAMP 335
             KP F +  T+SP    P+  P
Sbjct: 220 KRKPFFKKQETSSPYDVVPSMRP 242


>AY324311-1|AAQ89696.1|  158|Anopheles gambiae insulin-like peptide
           5 precursor protein.
          Length = 158

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +3

Query: 363 GDAVVGLMKLGFSIIEVGSVTPQP 434
           G+ + G+M+   S+++ G + P P
Sbjct: 77  GNGIAGMMEKRTSMVDEGQLVPYP 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,832
Number of Sequences: 2352
Number of extensions: 10918
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)