Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27h01
         (599 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M94065-1|AAA50163.1|  396|Homo sapiens dihydroorotate dehydrogen...   149   7e-36
BC065245-1|AAH65245.1|  395|Homo sapiens dihydroorotate dehydrog...   149   7e-36
BC119811-1|AAI19812.1|  664|Homo sapiens MYO3A protein protein.        31   4.1  
D50928-1|BAA09487.2|  962|Homo sapiens KIAA0138 protein.               30   5.4  
AC004611-1|AAC14666.1|  953|Homo sapiens KIAA0138 protein.             30   5.4  
AK094748-1|BAC04411.1|  384|Homo sapiens protein ( Homo sapiens ...    29   9.4  

>M94065-1|AAA50163.1|  396|Homo sapiens dihydroorotate dehydrogenase
           protein.
          Length = 396

 Score =  149 bits (361), Expect = 7e-36
 Identities = 77/151 (50%), Positives = 97/151 (64%), Gaps = 4/151 (2%)
 Frame = +3

Query: 159 DFNSYYENVLQPLSQYLSPEVAHRIGVAAIKHGLFPPDQNEDPKILKTRLLDYDLSNPLG 338
           D   Y E+++  L   L PE AHR+ V     GL P  + +D  +L+ R+L +   NP+G
Sbjct: 34  DERFYAEHLMPTLQGLLDPESAHRLAVRFTSLGLLPRARFQDSDMLEVRVLGHKFRNPVG 93

Query: 339 IAAGFDKHGDAVVGLMKLGFSIIEVGSVTPQPQPGNPKPRVFRLPEDGAVINRYGFXSIG 518
           IAAGFDKHG+AV GL K+GF  +E+GSVTP+PQ GNP+PRVFRLPED AVINRYGF S G
Sbjct: 94  IAAGFDKHGEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHG 153

Query: 519 HDEVYKKLEGIE----KAVMNRALLGVNLGK 599
              V  +L   +    K   +   LGVNLGK
Sbjct: 154 LSVVEHRLRARQQKQAKLTEDGLPLGVNLGK 184


>BC065245-1|AAH65245.1|  395|Homo sapiens dihydroorotate
           dehydrogenase protein.
          Length = 395

 Score =  149 bits (361), Expect = 7e-36
 Identities = 77/151 (50%), Positives = 97/151 (64%), Gaps = 4/151 (2%)
 Frame = +3

Query: 159 DFNSYYENVLQPLSQYLSPEVAHRIGVAAIKHGLFPPDQNEDPKILKTRLLDYDLSNPLG 338
           D   Y E+++  L   L PE AHR+ V     GL P  + +D  +L+ R+L +   NP+G
Sbjct: 33  DERFYAEHLMPTLQGLLDPESAHRLAVRFTSLGLLPRARFQDSDMLEVRVLGHKFRNPVG 92

Query: 339 IAAGFDKHGDAVVGLMKLGFSIIEVGSVTPQPQPGNPKPRVFRLPEDGAVINRYGFXSIG 518
           IAAGFDKHG+AV GL K+GF  +E+GSVTP+PQ GNP+PRVFRLPED AVINRYGF S G
Sbjct: 93  IAAGFDKHGEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHG 152

Query: 519 HDEVYKKLEGIE----KAVMNRALLGVNLGK 599
              V  +L   +    K   +   LGVNLGK
Sbjct: 153 LSVVEHRLRARQQKQAKLTEDGLPLGVNLGK 183


>BC119811-1|AAI19812.1|  664|Homo sapiens MYO3A protein protein.
          Length = 664

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 440 RESQAEGLPTPGGRSCHQQIWLXQHRARRSIQKAGRNREGRNE-SGTPR 583
           +E+ A+ LP P  R     +    HR R++++ AG+    R+  +GT R
Sbjct: 615 QEAPAQNLPAPAPRPAVLTVQRGSHRRRKALEPAGQQGPSRHSGAGTSR 663


>D50928-1|BAA09487.2|  962|Homo sapiens KIAA0138 protein.
          Length = 962

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
 Frame = +2

Query: 377  GPDETGLLDHRSGLGHXXXXXRESQAEGLPTP--GGRSC--HQQIWLXQHRARR---SIQ 535
            GP E    D R G G      R S+  GLP P  GGR    H Q  L +H+AR    ++ 
Sbjct: 818  GPPERHGRDSRDGWGGYGSDKRLSEGRGLPPPPRGGRDWGEHNQ-RLEEHQARAWQGAMD 876

Query: 536  KAGRNREGRNESGTPRRESG 595
                +RE     G  R  SG
Sbjct: 877  AGAASREHARWQGGERGLSG 896


>AC004611-1|AAC14666.1|  953|Homo sapiens KIAA0138 protein.
          Length = 953

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
 Frame = +2

Query: 377  GPDETGLLDHRSGLGHXXXXXRESQAEGLPTP--GGRSC--HQQIWLXQHRARR---SIQ 535
            GP E    D R G G      R S+  GLP P  GGR    H Q  L +H+AR    ++ 
Sbjct: 809  GPPERHGRDSRDGWGGYGSDKRLSEGRGLPPPPRGGRDWGEHNQ-RLEEHQARAWQGAMD 867

Query: 536  KAGRNREGRNESGTPRRESG 595
                +RE     G  R  SG
Sbjct: 868  AGAASREHARWQGGERGLSG 887


>AK094748-1|BAC04411.1|  384|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37429 fis, clone BRAWH2001666. ).
          Length = 384

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +2

Query: 467 TPGGRSCHQQIWLXQHRARRSIQKAGRNREGRNESGTPRRESG 595
           TPGG       WL   R RR  +KAG  R G   + TP   +G
Sbjct: 163 TPGGGRPEAGCWLENRRQRR--RKAGAERAGAGPTLTPPLPAG 203


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,511,512
Number of Sequences: 237096
Number of extensions: 1594317
Number of successful extensions: 3946
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3945
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)