Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27g17
(437 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0235 + 32539025-32539886,32540330-32540473,32540595-325407... 32 0.18
04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733 31 0.40
09_03_0125 - 12531409-12531442,12531577-12531668,12531747-125323... 31 0.53
06_03_0905 + 25843547-25844314 29 1.2
02_01_0791 - 5930553-5930802,5931042-5932351 29 1.2
01_06_1183 - 35176780-35177266,35179631-35181093 29 1.2
11_01_0066 - 536281-537196,537397-537452 29 1.6
08_02_1227 - 25398063-25398302,25398629-25398790,25399019-253991... 29 1.6
06_03_0661 + 23225514-23227073 29 2.2
05_04_0163 + 18652306-18652839,18653785-18653853,18655139-186552... 29 2.2
11_06_0610 - 25449085-25453284 28 2.9
12_02_0749 - 22758317-22760407 28 3.8
09_04_0430 + 17502387-17503505 28 3.8
07_03_1486 + 26899479-26899549,26899861-26899989,26900649-269008... 28 3.8
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 28 3.8
08_02_1084 - 24232968-24234779 27 5.0
03_05_0799 + 27809301-27811550 27 5.0
01_07_0232 + 42182942-42183490,42183593-42183661,42184320-421844... 27 5.0
12_02_1265 - 27435096-27437675 27 6.6
07_03_1160 - 24430240-24431268 27 6.6
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 27 6.6
02_05_1268 - 35345283-35345462,35345577-35345636,35345719-353460... 27 6.6
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 27 6.6
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 27 8.7
05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784 27 8.7
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 27 8.7
01_01_0082 + 625198-625719 27 8.7
>03_06_0235 +
32539025-32539886,32540330-32540473,32540595-32540747,
32540871-32540986,32541254-32541421,32541534-32541758,
32541884-32542015
Length = 599
Score = 32.3 bits (70), Expect = 0.18
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 119 APKTGGKGRVKSLPTPVANSPLSPVRQPPK 208
AP GG+GR+ + P P +++PL+ +PP+
Sbjct: 40 APDGGGQGRLPAPPPPTSDAPLAVQNKPPE 69
>04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733
Length = 760
Score = 31.1 bits (67), Expect = 0.40
Identities = 21/78 (26%), Positives = 29/78 (37%)
Frame = +2
Query: 146 VKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPLERXXXXXXXXXXXXXNRK 325
V +PTPV PV+QP + + PT A PL++
Sbjct: 393 VIQMPTPVQLQTPPPVKQPARQHQPQPTPPPPQAAPIPAAPLQQQPPQPQHKETIHHEAV 452
Query: 326 DGYFVPPEFGNKLESLPA 379
PP G+ LE +PA
Sbjct: 453 TPRRAPPTSGSSLELVPA 470
>09_03_0125 -
12531409-12531442,12531577-12531668,12531747-12532337,
12532454-12532789,12532899-12533156,12533867-12533971,
12534625-12534702,12535464-12535542,12535649-12535723,
12535828-12535946,12536042-12537106
Length = 943
Score = 30.7 bits (66), Expect = 0.53
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = -1
Query: 185 TAASWRQALAKI*HGPCHRSLARQKCYSLEKNGSL*LLVSTQKS 54
+A+ WR LA++ P S +++ S+++ GS +LVST+K+
Sbjct: 247 SASWWRPVLARMVGRPVSVSGLKKRLVSIDRKGSYTMLVSTRKT 290
>06_03_0905 + 25843547-25844314
Length = 255
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 158 PTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPL 271
P P+ P PV PPK + P ++ PT + P+
Sbjct: 76 PPPLVAPPKVPVTHPPKGPVTRPPPVTYPTPPVTTPPV 113
>02_01_0791 - 5930553-5930802,5931042-5932351
Length = 519
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 90 VFFERITFLTRQRPVARAVSNLCQRLSPTRRC 185
VF + FLTR RPV V C + P RRC
Sbjct: 89 VFLSTVRFLTRPRPV-YLVDFACYKPPPERRC 119
>01_06_1183 - 35176780-35177266,35179631-35181093
Length = 649
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 427 CIRRS-RSLFEIQFVAVRGQTFQFVTKLGRHKISIFSVDDWFFTYN 293
C+ R+ + F+ + +A RG++ +F RH+ + F + W TY+
Sbjct: 602 CVHRNGEARFKRRLIAFRGKSEKFHPTSCRHRFNHFHLPGWLSTYH 647
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 158 PTPVANSPLSPVRQPPKSNIKPPTRISLPTRT 253
P +A P SP PP S PP PT T
Sbjct: 217 PPSIATPPPSPASPPPPSTATPPPPSPTPTTT 248
>08_02_1227 -
25398063-25398302,25398629-25398790,25399019-25399150,
25399909-25399961,25400465-25400942
Length = 354
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 170 ANSPLSPVRQPPKSNIKPPTRISLP 244
A SPL P PP SN +PP S+P
Sbjct: 328 AGSPLHPGIAPPSSNSQPPFLSSMP 352
>06_03_0661 + 23225514-23227073
Length = 519
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 90 VFFERITFLTRQRPVARAVSNLCQRLSPTRRC--RLFVSRQNLTSNHLRASL 239
VF + FLTR RPV + C + P R+C F+ +LT + A+L
Sbjct: 93 VFLSTLYFLTRPRPV-YLLDFACYKPDPQRKCTRETFMRCSSLTGSFTDANL 143
>05_04_0163 +
18652306-18652839,18653785-18653853,18655139-18655270,
18655424-18655477,18655570-18655614,18656166-18656305,
18657107-18657232,18657325-18657361
Length = 378
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 317 NRKDGYFVPPEFGNKLESLPA 379
NR++ FV + G KLESLPA
Sbjct: 96 NRREALFVLAQLGRKLESLPA 116
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 146 VKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANP 268
VKSLP P +P+S + PP ++ PP +SLP + P
Sbjct: 1261 VKSLPPP---APVS-LPPPPVKSLPPPAPVSLPPPVVKSLP 1297
>12_02_0749 - 22758317-22760407
Length = 696
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 331 SIFSVDDWFFTYNAAADAALQRIG 260
SI + DDWF NA AAL R+G
Sbjct: 54 SILAEDDWFPRLNAEFAAALPRLG 77
>09_04_0430 + 17502387-17503505
Length = 372
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 143 RVKSLPTPVANSPLS-PVRQPPKSNIKPPTRIS-LPTRTFSANPLE 274
R LPTP P S P R P+S PP R++ P T +A P+E
Sbjct: 178 RAAPLPTPPRAPPQSTPPRAAPQST--PPQRVAPQPPATAAAPPIE 221
>07_03_1486 +
26899479-26899549,26899861-26899989,26900649-26900834,
26901025-26901247,26901662-26901666,26901796-26901924,
26902697-26902894,26903138-26903356,26903461-26903699,
26903797-26903888,26904009-26904224,26904327-26904554,
26904631-26904722,26904806-26904899,26905475-26905567,
26905667-26906640,26906727-26906841,26907135-26908895
Length = 1687
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 161 TPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPL 271
T N S VR+P S+I+ P R + +R+ S +PL
Sbjct: 12 TQTTNFVWSVVRRPAASSIRSPVRPVISSRSRSTSPL 48
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 137 KGRVK-SLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSA 262
KG V ++PT N+P +PV P + N PP ++ P T A
Sbjct: 99 KGAVSPAVPTRPQNAP-TPVTPPKEYNAPPPVELTPPAPTHVA 140
>08_02_1084 - 24232968-24234779
Length = 603
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 149 KSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANP 268
+ LP P PL P +QPP + PP + P S P
Sbjct: 57 QQLPPPSLPPPL-PQKQPPSQQLPPPPQQQQPPPQHSLPP 95
>03_05_0799 + 27809301-27811550
Length = 749
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 107 NIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANP 268
++ PK G V + T ANS LSPV P + + P+ + T F+ P
Sbjct: 187 DLLGCPKAGHG--VLRVVTRAANSMLSPVSSPTAEDARSPSAAVMMTTKFADLP 238
>01_07_0232 +
42182942-42183490,42183593-42183661,42184320-42184451,
42184547-42184600,42184714-42184758,42185383-42185522,
42185777-42185902,42185985-42186002,42186631-42187276,
42188121-42188843
Length = 833
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 317 NRKDGYFVPPEFGNKLESLPA 379
NR++ FV + G KLESLP+
Sbjct: 101 NRREALFVLAQLGRKLESLPS 121
>12_02_1265 - 27435096-27437675
Length = 859
Score = 27.1 bits (57), Expect = 6.6
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +2
Query: 107 NIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANP 268
N+ GG + + T + PLS QP SNIK + SLP NP
Sbjct: 146 NLKSTSNNGGTNQASQMATSYSYQPLSDA-QP--SNIKSHNQHSLPEAKMPYNP 196
>07_03_1160 - 24430240-24431268
Length = 342
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +2
Query: 122 PKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANP 268
P G P P+ N P+ P QPP+ N P + P + P
Sbjct: 218 PNPNGPSIPNQPPQPIPNGPIKP-DQPPQPNPDMPPKPDQPPQPCPDGP 265
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 158 PTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFS 259
P PV ++PV P K I PP RI+ PT S
Sbjct: 337 PFPVEKVTVNPVVPPEKRYISPP-RINKPTSATS 369
>02_05_1268 -
35345283-35345462,35345577-35345636,35345719-35346042,
35346266-35346349,35346784-35346872,35346959-35347073,
35347534-35347660,35347743-35347882,35348010-35348071,
35348769-35348838,35348947-35349066,35349155-35349232,
35349738-35349968,35350110-35350220
Length = 596
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +3
Query: 255 FRPIRWSAASAA----AL*VKNQSSTEKMDILCRPSLVTNWK 368
FR ++WSA SAA L ++N ++ L SLV NWK
Sbjct: 144 FRTLKWSALSAARDSSQLNIENNTTDPSFPALAGHSLV-NWK 184
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 119 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKP 223
+P TGG +P +SP SP+ P S+ P
Sbjct: 533 SPSTGGYTPTPDVPISTPSSPYSPLVPTPPSSTTP 567
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 244 YAHFFGQSVGAQHQQQHCK*KTSRQQKRWI 333
Y H Q Q QQQH + +S QQ++W+
Sbjct: 62 YHHQAQQLHQHQQQQQHAQRNSSSQQQQWL 91
>05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784
Length = 394
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 155 LPTPVANSPLSPVRQPPKSNIKP-PTRISLPTRTFSANPL 271
+PTP A+S L+P P+ P P + P +A PL
Sbjct: 92 MPTPAASSALAPATSSPRPASPPTPPWTTAPPPGIAAPPL 131
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 152 SLPTPVANSPLSPVRQPPKSNIKPP 226
++P P + +P+ P ++PP KPP
Sbjct: 238 AMPKPPSVAPVQPPQRPPAPATKPP 262
>01_01_0082 + 625198-625719
Length = 173
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +2
Query: 155 LPTPVANSPLSPVRQPPKSNIKPPTRISLPT 247
LPTPV P PV PP S PP PT
Sbjct: 59 LPTPVYYPPPPPVYYPPPS--PPPVAYPPPT 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,691,417
Number of Sequences: 37544
Number of extensions: 229950
Number of successful extensions: 932
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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