Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27g17
(437 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical pr... 36 0.017
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p... 29 1.1
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical... 29 1.1
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 29 1.5
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 1.5
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 29 1.5
Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z70212-4|CAA94164.1| 322|Caenorhabditis elegans Hypothetical pr... 27 4.5
AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical ... 27 4.5
AF099913-6|AAC68748.2| 203|Caenorhabditis elegans Hypothetical ... 27 6.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 27 6.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 27 6.0
Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical... 27 7.9
AC199241-2|ABO33280.1| 221|Caenorhabditis elegans Hypothetical ... 27 7.9
>U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical
protein ZC395.8 protein.
Length = 687
Score = 35.5 bits (78), Expect = 0.017
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 98 RENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSN---IKPPTRISLPTRTFSA-N 265
+E + PK + S+P P SP P+ PP ++ + PP LPTR SA N
Sbjct: 518 KEETEEEQPKEENNSTLPSIPIPSIFSPYEPIVPPPATSPDPMNPPIASLLPTRILSATN 577
Query: 266 PLE 274
LE
Sbjct: 578 VLE 580
>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 119 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPLE 274
+PK GR +S PTP NS +PV K+ IK +S P + P+E
Sbjct: 1498 SPKKRVSGR-RSAPTPTKNSKKAPVSPKKKTLIKETNGVS-PKKNKYGLPME 1547
>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 119 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPLE 274
+PK GR +S PTP NS +PV K+ IK +S P + P+E
Sbjct: 1498 SPKKRVSGR-RSAPTPTKNSKKAPVSPKKKTLIKETNGVS-PKKNKYGLPME 1547
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 137 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 250
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 137 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 250
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 137 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 250
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 137 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 250
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 137 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 250
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 137 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 250
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 137 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 250
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 137 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 250
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 137 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 250
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 98 RENNIFDAPKTGGKGRVKSLPTPVANSPLSP--VRQPPKSNIKPPT 229
+E + + PK K V ++ + +P S V PP+ NI PPT
Sbjct: 170 KEEKVKEDPKKDDKSGVDTIKKEGSTAPASTALVPPPPRQNIPPPT 215
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 137 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 250
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 29.1 bits (62), Expect = 1.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 137 KGRVKSLPTPVANSPL-SPVR--QPPKSNIKPPT 229
+ R K P V +PL +P+R QPP NIKP T
Sbjct: 384 RNRKKEKPKVVRKAPLRAPIRPRQPPNQNIKPIT 417
>Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical
protein C29E6.4 protein.
Length = 906
Score = 28.7 bits (61), Expect = 2.0
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 243 LRALFRPIRWSAAS-AAAL*VKNQSSTEKMDILCRPSLVTNWKVCPRTATNWISNXERDL 419
L A+ P+R + + ++L +E++D++C S+ K CP A +N ER++
Sbjct: 769 LPAIMSPMRLTPSGWQSSLSAFRIDGSEQIDVVCIISICDENKKCPLMACTSPANREREV 828
Query: 420 R 422
R
Sbjct: 829 R 829
>Z70212-4|CAA94164.1| 322|Caenorhabditis elegans Hypothetical
protein R04D3.6 protein.
Length = 322
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 93 FFERITFLTRQRPVARAVSNLCQRLSPTRRCRLFVSRQNLTS 218
FF +I F+T ++P+ LC+ P C F + LT+
Sbjct: 62 FFTQIRFITTKKPIEMWSYGLCKHFEPW-ICYCFYQAEQLTA 102
>AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical
protein Y61B8A.2 protein.
Length = 356
Score = 27.5 bits (58), Expect = 4.5
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +3
Query: 99 ERITFLTRQRPVARAVSNLCQRLSPTRRCRLFVSRQNLTSNHLRASLCLRALF 257
E I +T RP +AVS + RR V +NH+R S+ +R F
Sbjct: 307 ESIAIVTVHRPYRKAVSQMATEFKRRRRA---VQVLPFLANHMRHSVTMRQSF 356
>AF099913-6|AAC68748.2| 203|Caenorhabditis elegans Hypothetical
protein C29F9.6 protein.
Length = 203
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 386 RCTRANFPICYQTRAAQNIH 327
RCT A PIC R AQN++
Sbjct: 54 RCTNAECPICGAHRTAQNMN 73
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 158 PTPVANSPLSPV--RQPPKSNIK-PPTRISLPTRTFSANPL 271
P P++N P P PPK I+ PP S P R ++ P+
Sbjct: 79 PLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPV 119
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 158 PTPVANSPLSPV--RQPPKSNIK-PPTRISLPTRTFSANPL 271
P P++N P P PPK I+ PP S P R ++ P+
Sbjct: 301 PLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPV 341
>Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical
protein F11E6.7 protein.
Length = 1011
Score = 26.6 bits (56), Expect = 7.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 149 KSLPTPVANSPLSPVRQPPKSNIKPP 226
+SLP V +SPL+P R+P K P
Sbjct: 602 ESLPVDVVSSPLTPRRRPLAEAAKNP 627
>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical protein
F29D11.2 protein.
Length = 1153
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 119 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 250
AP+ K P V L ++ PP++ KPP+R + TR
Sbjct: 1090 APRATPASATKKKPL-VEEDALEILKSPPRNTKKPPSRPTTATR 1132
>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical protein
F29D11.2 protein.
Length = 1153
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 119 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 250
AP+ K P V L ++ PP++ KPP+R + TR
Sbjct: 1090 APRATPASATKKKPL-VEEDALEILKSPPRNTKKPPSRPTTATR 1132
>AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical
protein F41E6.12 protein.
Length = 304
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 131 GGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPLE 274
GG P VA+S + P+ PP + + P T S + PL+
Sbjct: 41 GGSASASGTPVQVASSVV-PLILPPMTTLPPSTTTSTTAEPTTTTPLK 87
>AC199241-2|ABO33280.1| 221|Caenorhabditis elegans Hypothetical
protein 2RSSE.2 protein.
Length = 221
Score = 26.6 bits (56), Expect = 7.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 158 PTPVANSPLSPVRQPPKSNIKPPTRISLPTR 250
PTP+ +P++ KSNI + S+PTR
Sbjct: 122 PTPLPKPARAPLQTSSKSNISNASDDSVPTR 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,791,460
Number of Sequences: 27780
Number of extensions: 191261
Number of successful extensions: 732
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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