Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27g09
(561 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 64 2e-11
SPCC1259.09c |||pyruvate dehydrogenase protein x component|Schiz... 44 2e-05
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 38 0.001
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 33 0.022
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.066
SPCC1840.09 |||NAD dependent epimerase/dehydratase family protei... 30 0.27
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 30 0.27
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.27
SPCC1259.07 |||transcriptional regulatory protein Rxt3 |Schizosa... 29 0.47
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 29 0.62
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 28 0.82
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 28 1.1
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 27 1.4
SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 27 1.9
SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr 1|||... 27 1.9
SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 3.3
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 4.4
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 4.4
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 26 4.4
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 26 4.4
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 26 4.4
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 25 5.8
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 5.8
SPAC1F5.05c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 5.8
SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi... 25 7.6
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 25 7.6
SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit Gsa1... 25 7.6
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 7.6
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 63.7 bits (148), Expect = 2e-11
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +2
Query: 302 VTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG 478
+ TP FP+S++EG + + K+ G+ V DE + +ETDK PV AP GV+KE VK+G
Sbjct: 45 IKTPPFPESITEGTLAQWLKQPGEYVNKDEEIASVETDKIDAPVTAPDAGVLKEQLVKEG 104
Query: 479 ETVKAGQKLFRLEITGEAPKKAAA 550
+T+ Q + ++ + P+ +A
Sbjct: 105 DTITIDQDIAVIDTSAAPPEGGSA 128
>SPCC1259.09c |||pyruvate dehydrogenase protein x
component|Schizosaccharomyces pombe|chr 3|||Manual
Length = 456
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/66 (27%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +2
Query: 311 PSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETV 487
P+ ++ EG++ K K GDS + +++LE+ETDK + V +G++ ++ ++ G +
Sbjct: 41 PALSPTMEEGNITKWHFKEGDSFKSGDILLEVETDKATMDVEVQDNGILAKVLIEKGSNI 100
Query: 488 KAGQKL 505
G+ +
Sbjct: 101 PVGKNI 106
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 37.9 bits (84), Expect = 0.001
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +2
Query: 302 VTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG 478
+ P+ +++ G++ KK+GD + +V+ EIETDK I G + ++ ++ G
Sbjct: 56 INMPALSPTMTTGNIGAFQKKIGDKIEPGDVLCEIETDKAQIDFEQQDEGYLAKILIETG 115
Query: 479 -ETVKAGQKL 505
+ V G+ L
Sbjct: 116 TKDVPVGKPL 125
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 33.5 bits (73), Expect = 0.022
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Frame = -1
Query: 492 ALTVSPSLTYNSLMTP----WPGAMTGMAVL-----SVSISRTTSSAATLSPTFLSNLTS 340
+L +P Y SLM W +TG VL S S+S TTSS+++ SP+ S T+
Sbjct: 93 SLCTTPCPGYGSLMCGGDLYWSVYLTGNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTT 152
Query: 339 PSETESGKLGVVTSCSTS 286
S + S +S S+S
Sbjct: 153 TSPSSSSSSSSSSSSSSS 170
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.9 bits (69), Expect = 0.066
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -1
Query: 531 ASPVISNLNS-FCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFL 355
A+P S+ S F + T S + +Y+S ++ + T S S TSS T S T
Sbjct: 76 ATPTSSSEPSIFSESATPSETNSYSSPVSSYSDPATSQLPSSTSFFSPTSSEYTPSSTES 135
Query: 354 SNLTSPSETESGKLGVVTSCSTS 286
S+L PS S L TS S
Sbjct: 136 SSLLDPSSVSSAILPSSTSVEVS 158
Score = 27.1 bits (57), Expect = 1.9
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Frame = -1
Query: 558 ASVAAAFLGASPVI------SNLNSFCPALTVSPSLTYNSLMTPWPG-AMTGMAVLSVSI 400
+SV++A L +S + S+L+S P + + S +S + P + T + S +
Sbjct: 142 SSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAA 201
Query: 399 SRTTSSAATLSPTFLSNLTSPSETESGKLGVVTSCSTS 286
+TSS+ S + +S+ +SPS + S L +S STS
Sbjct: 202 PTSTSSSYLSSSSVVSSSSSPSSSSSSTL-TSSSLSTS 238
>SPCC1840.09 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 276
Score = 29.9 bits (64), Expect = 0.27
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -1
Query: 519 ISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSA 379
ISNL S + + P YN P+ GA+ + +S SI+R TS A
Sbjct: 183 ISNLRS----IFLRPGFMYNFNDRPFTGALASLFTVSSSINRATSGA 225
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.9 bits (64), Expect = 0.27
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = -1
Query: 522 VISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLT 343
+ S ++S T S + S T P + T +++ S S S T SSA+T SP+ +S+
Sbjct: 560 ISSGISSSSIPSTFSSVSSILSSSTSSPSS-TSLSISSSSTSSTFSSASTSSPSSISSSI 618
Query: 342 SPSET 328
S S T
Sbjct: 619 SSSST 623
Score = 29.5 bits (63), Expect = 0.35
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Frame = -1
Query: 558 ASVAAAFLGASPVISNLNSFCPALTVSP-SLTYNSLMTPWPGAMTGMAVLSVSISRT--- 391
+S ++ +S ++S ++ +T S SLT S + P ++ +++ S S T
Sbjct: 693 SSSSSPIPSSSSLVSTYSASLSNITHSSLSLTAMSSSSAIPTSVNSSTLITASSSNTLLS 752
Query: 390 --TSSAATLSPTFLSNLTS--PSETESGKLGVVTSCST 289
TSS+A +S T +SN++S PS T S + +T+ ST
Sbjct: 753 SITSSSAIVSSTTVSNISSNLPSATASSQ-SQLTNSST 789
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.9 bits (64), Expect = 0.27
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -1
Query: 504 SFCPALTVSPSLTYNSLMTPWPGAM--TGMAVLSVSISRTTSSAATLS 367
SF + V+ +L YN P P A+ G V +VS S TSS TL+
Sbjct: 4 SFILSTLVAGALAYNEFSAPGPNAVLQEGGGVNTVSWSNLTSSTVTLT 51
Score = 26.2 bits (55), Expect = 3.3
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 498 CPALTVSPS-LTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLTSPSETES 322
C T+S S L+Y+ ++ A + + + S TSS++T S + S+ +SPS + S
Sbjct: 111 CSTCTISTSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSS 170
Query: 321 GKLGVVTSCSTS 286
S S+S
Sbjct: 171 KSSSSSKSSSSS 182
>SPCC1259.07 |||transcriptional regulatory protein Rxt3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 351
Score = 29.1 bits (62), Expect = 0.47
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 190 QNTCTLTRNQTEPTESSGRPQSSSIHP 270
+NT ++ R +T PT+SSG ++ HP
Sbjct: 106 ENTSSVKRQKTLPTQSSGEEEAKYSHP 132
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 28.7 bits (61), Expect = 0.62
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 359 KVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQKL 505
+ G+ + A E E+E K +P++A GV+ +L + G ++ AG L
Sbjct: 727 ETGEHIKAGEAYAEVEVMKMIMPLVATEDGVV-QLIKQPGASLDAGDIL 774
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 28.3 bits (60), Expect = 0.82
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +2
Query: 305 TTPSFPDSVSEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGET 484
TTPS V E K D+ D+ +E V + + +KT + P + +D +
Sbjct: 456 TTPS-ASKVEEPSKKRDE---DNHQKEETVTQPKREKTPVEKSFPKPASSPVTFSEDVKK 511
Query: 485 VKAGQKLFRLEITGEAPKKAAATEA 559
+ +K +LE++ EAPK A E+
Sbjct: 512 EPSEEK--KLEVSDEAPKAAPLAES 534
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 27.9 bits (59), Expect = 1.1
Identities = 26/94 (27%), Positives = 41/94 (43%)
Frame = -1
Query: 558 ASVAAAFLGASPVISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSA 379
+S+A + + AS +S N VS + +S + + S +IS TSS+
Sbjct: 224 SSIALSSVVASASVSAANKGVSTPAVSSAAASSSAVVSSVVSSATSVAASSTISSATSSS 283
Query: 378 ATLSPTFLSNLTSPSETESGKLGVVTSCSTSRGF 277
A+ SPT S + SGK G+ T G+
Sbjct: 284 ASASPT--------SSSVSGKRGLAWIPGTDLGY 309
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = +1
Query: 85 VRSISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSS 258
V ++ N+ L ++ +VP+ HP+ +N S + + + P +S Q+S
Sbjct: 349 VTTVPSNSPATLNSYTTSVPSGMSRHPMLMNPSTPEPSLGVNSPSLRPLQSLNNVQNS 406
>SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 425
Score = 27.1 bits (57), Expect = 1.9
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = +2
Query: 278 NPLLVEQDVTTPSFPDSVSEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIK 457
N LL++ PS P + L +V + + +L I ++ H K
Sbjct: 28 NQLLIDMGFIQPSMPGIFQY--LPLGLRVQNKICD---LLHISMRSLGASAISLAHLSSK 82
Query: 458 ELYVKDGETVKAGQKLFRL 514
E++ K G K G +LFRL
Sbjct: 83 EIWEKSGRWQKTGSELFRL 101
>SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 27.1 bits (57), Expect = 1.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 423 MAVLSVSISRTTSSAATLSPTFLSNLTSPSETESGK 316
+ V + T S A ++ FLSNL S +TES +
Sbjct: 119 LQVTKAQTNSATGSEALMAKNFLSNLASRIQTESAQ 154
>SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 615
Score = 26.2 bits (55), Expect = 3.3
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 88 RSISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIH 267
R+ E+ T L+ A+P S PV P+ QN+ ++ P E G + SIH
Sbjct: 417 RAPEESPMTFLQKKMAALPTSSPVRPMLKPTLQLQNS---PLSKLVPQE-VGNKVNDSIH 472
Query: 268 PLHESPA 288
P+
Sbjct: 473 TTSNQPS 479
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 25.8 bits (54), Expect = 4.4
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 224 NQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSEGDVKLDKKVGDSVAADE 388
+QP L + + +++ QD+ P+FPDS E D VG S++ +E
Sbjct: 298 DQPACLAFACSLTHANSKRSIMLPQDID-PTFPDSEPEDDGHASSTVG-SLSKEE 350
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 4.4
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 117 ARSTSRRCTGVRASPSASSQQLKRPKYLHP-YTQPN 221
A +S T ASP+ +Q +P Y P Y+QP+
Sbjct: 71 AGGSSTGSTPRTASPAVGNQDYSKPSYSQPSYSQPS 106
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 25.8 bits (54), Expect = 4.4
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 118 LEAHPDAVPASG-PVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIH 267
++A ++P SG + P++ N+S++ + + N TESS RP SS ++
Sbjct: 145 MQASVHSLPLSGCSIGPVRTNHSSSLSNSS---NSLLQTESSLRPNSSFVN 192
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 25.8 bits (54), Expect = 4.4
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = -1
Query: 516 SNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLTSP 337
++L SF L + S Y+S +P ++ SV S TSS+ + S + S+ +
Sbjct: 488 ASLTSFGNFLGTATS--YSSASASYPSTSMSASLSSVHTSSATSSSKSSSSS--SSRSGS 543
Query: 336 SETESGKLGVVTSCSTS 286
S + S + G +S +S
Sbjct: 544 SSSSSSRSGSTSSSGSS 560
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 25.8 bits (54), Expect = 4.4
Identities = 17/64 (26%), Positives = 23/64 (35%)
Frame = +1
Query: 91 SISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP 270
S + N TT A P N++ Q+T TRN T S+G +
Sbjct: 143 STTANRTTSTPTTTTARTTRTTPRPTATTNTSNQSTSNSTRNGTSAATSNGTGTGAGTGA 202
Query: 271 LHES 282
H S
Sbjct: 203 SHRS 206
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 25.4 bits (53), Expect = 5.8
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 100 ENATTLLEAHPDA--VPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIH 267
E AT+ LE ++ P P + +NS N T PT S+G P +S+H
Sbjct: 22 EAATSRLEDLVESGHKPLPNMHRPSRDSNSQTHNISFNIGTPTAPTVSTGSPAVASLH 79
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.4 bits (53), Expect = 5.8
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = -1
Query: 405 SISRTTSSAAT-LSPTFLSNLTSPSETE--SGKLGVVTSCSTS 286
S S T+S+++T +S ++ S+ T PS++ S +GVV CS +
Sbjct: 208 SSSFTSSTSSTPISSSYSSSGTLPSKSNKSSNHVGVVVGCSVA 250
>SPAC1F5.05c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 151
Score = 25.4 bits (53), Expect = 5.8
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 148 SGPVHPLQVNNSN-AQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPACRARCDHSKFPG 324
+GP P+ +N SN A + + P S S+S PL P+ + HS F
Sbjct: 58 TGPTSPVSINASNAAPSNLKASYIPANPRRLSSSTSSASSPPLRRLPSVQ----HSTFDD 113
Query: 325 L 327
L
Sbjct: 114 L 114
>SPBC17D11.07c |rpn2||19S proteasome regulatory subunit
Rpn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 965
Score = 25.0 bits (52), Expect = 7.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 97 SENATTLLEAHPDAVPASGPVHP 165
S+ A L+E + DAVPAS P
Sbjct: 924 SDKAPDLIELNRDAVPASADTEP 946
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 25.0 bits (52), Expect = 7.6
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = -1
Query: 483 VSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLTSPSETESGKLGVV 304
+ P +++N + P + S+S + TSS T SP N ++PS++ + +
Sbjct: 158 LQPLISFNLDLFPKFSKQQQIESSSISKNLNTSSFNTRSPLRNHNFSNPSKSSKNGVHTI 217
Query: 303 TSCSTS 286
+ +S
Sbjct: 218 NNMQSS 223
>SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit
Gsa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 25.0 bits (52), Expect = 7.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -1
Query: 555 SVAAAFLGASPVISNLNSFC--PALTVSPSLT-YNSLMTPWPGAMTGMA 418
+++ +F G S +SNL+++C L P T Y ++ T G TG++
Sbjct: 149 TISVSFGGVSKAVSNLHAYCSQSGLYRKPLTTNYLTVNTSVSGICTGIS 197
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.0 bits (52), Expect = 7.6
Identities = 19/92 (20%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = -1
Query: 558 ASVAAAFLGASPVISNLNSFCPALTVSPSLTYNSLMTPW-PGAMTGMAVLSVSISRTTSS 382
AS ++ +SP++S S + ++ P+ + +TP P + + + + + +TS
Sbjct: 374 ASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSV 433
Query: 381 AATLSPTFLSNLTSPSETESGKLGVVTSCSTS 286
T +P + L + + T S + ++ TS
Sbjct: 434 PYTSTPVTSTPLATTNCTTSTSVPYTSTPVTS 465
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,413,867
Number of Sequences: 5004
Number of extensions: 51152
Number of successful extensions: 196
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 236012634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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