Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27g09
(561 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 55 4e-08
02_03_0404 + 18648632-18648669,18649319-18649379,18649449-186494... 50 2e-06
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 45 4e-05
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592... 44 8e-05
05_03_0359 - 12929240-12929376,12931379-12933497,12933594-129337... 37 0.013
06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811... 36 0.029
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37... 36 0.029
08_02_0759 - 20851828-20851932,20852190-20852285,20853231-208533... 33 0.12
12_01_0402 - 3179365-3180343,3180907-3182530,3183357-3183768 33 0.16
04_04_0323 - 24392043-24393021,24393135-24393544 32 0.27
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 32 0.36
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 30 1.1
01_06_1196 + 35322662-35324212 30 1.5
12_02_0228 + 15903452-15903812,15904153-15904202,15904615-159047... 29 3.4
10_08_0262 + 16307003-16308416,16309501-16309595,16309954-163099... 29 3.4
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 29 3.4
07_03_0852 - 22020159-22021388 28 4.4
04_03_0151 + 11905926-11906618 28 4.4
03_06_0581 + 34886728-34886817,34886990-34887175,34887332-348875... 28 4.4
01_01_0842 - 6571432-6571487,6571586-6571675,6571967-6572274,657... 28 4.4
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 27 7.7
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 27 7.7
05_07_0331 - 29324967-29326256,29326919-29327020,29327226-293272... 27 7.7
05_03_0515 + 14930736-14932697 27 7.7
02_04_0533 + 23719353-23719910,23720012-23720418,23720690-23721023 27 7.7
01_01_1149 - 9134390-9134600,9134732-9134790,9135650-9135724,913... 27 7.7
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 54.8 bits (126), Expect = 4e-08
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 299 DVTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKD 475
+ P +SV++G + KK GD V ADE + +IETDK I V +P GVI++ +
Sbjct: 75 EAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFIASE 134
Query: 476 GETVKAGQKL 505
G+TV G K+
Sbjct: 135 GDTVTPGTKV 144
>02_03_0404 +
18648632-18648669,18649319-18649379,18649449-18649476,
18649787-18649861,18649929-18649984,18650085-18650129,
18650224-18650475,18650586-18650680,18651114-18651204,
18651356-18651466,18651556-18651750,18651827-18652018
Length = 412
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 299 DVTTPSFPDSVSEGDVKLD-KKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKD 475
D P +S+++G + KK GD V ADE + +IETDK + V +P G+I++ +
Sbjct: 47 DAVVPFMGESITDGTLATFLKKPGDRVEADEPIAQIETDKVTMDVASPEAGIIEKFVASE 106
Query: 476 GETVKAGQKL 505
G V G K+
Sbjct: 107 GGIVTPGVKV 116
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +2
Query: 182 QTPKILAPLHATKLNQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSEGDV-KLDK 358
+ P P T LN + + S + L Q++ PS +++EG++ + K
Sbjct: 1584 RAPNNCIPTTITGLNGSLSCGQVSSARSFSSSADLPPHQEIGMPSLSPTMTEGNIARWLK 1643
Query: 359 KVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG-ETVKAGQ 499
K GD V+ EV+ E+ETDK + + G + ++ DG + +K G+
Sbjct: 1644 KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDGAKEIKVGE 1691
>07_03_0044 -
12758606-12758676,12758765-12758860,12759197-12759299,
12759379-12759474,12759537-12759603,12759682-12759749,
12759898-12759973,12760112-12760197,12760285-12760361,
12761461-12761533,12761627-12761875,12761997-12762089,
12762218-12762292,12762661-12762716,12763473-12763513,
12763907-12764001,12764085-12764158,12765052-12765145,
12765484-12765519
Length = 541
Score = 44.0 bits (99), Expect = 8e-05
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +2
Query: 182 QTPKILAPLHATKLNQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSEGDV-KLDK 358
++P P T LN + S + L Q++ PS +++EG++ + K
Sbjct: 81 RSPNNFIPNTITGLNGSLSCGQIASARSFSSSADLPPHQEIGMPSLSPTMTEGNIARWLK 140
Query: 359 KVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG-ETVKAGQ 499
K GD V+ EV+ E+ETDK + + G + ++ DG + +K G+
Sbjct: 141 KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDGSKEIKVGE 188
>05_03_0359 - 12929240-12929376,12931379-12933497,12933594-12933773,
12933905-12934118,12934199-12934551,12934642-12934864,
12934953-12935230,12935456-12935725,12935817-12935939,
12936025-12936102,12936351-12936527,12936597-12936686,
12937010-12937120,12937397-12937585,12937667-12937858,
12937990-12938076,12938153-12938257,12938340-12938396,
12938471-12938545,12938647-12938763,12938876-12939000,
12939082-12939121,12939241-12939291,12939382-12939569,
12939808-12939901,12939976-12940149,12940242-12940337,
12940597-12940689,12940794-12940955,12941034-12941240,
12941356-12941728,12942379-12942436,12943096-12943171,
12943874-12943941,12944321-12944642
Length = 2433
Score = 36.7 bits (81), Expect = 0.013
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +2
Query: 365 GDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQKLFRLEITGEAPKKA 544
G V AD E+E K +P+++P GVI + + +G+ ++AG + RL++ + K
Sbjct: 880 GAHVDADVPYAEVEVMKMCMPLLSPASGVI-HVVMSEGQAMQAGDLIARLDLDDPSAVKR 938
Query: 545 A 547
A
Sbjct: 939 A 939
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 88 RSISENATTLLEAHPDAVPASGPVHPLQVNN 180
R + + + L HP A PA+GP+H + +NN
Sbjct: 1625 REMEDKESRKLVYHP-ATPAAGPLHGVALNN 1654
>06_03_0163 -
17380601-17380710,17380796-17380856,17381076-17381150,
17381538-17381600,17381679-17381755,17382432-17382515,
17382610-17382654,17382729-17382789,17383658-17384053,
17384220-17384289,17387010-17387083,17387202-17387246,
17387342-17387391,17387846-17387947,17388587-17388620,
17388681-17388758,17388915-17388965,17389082-17389085,
17389182-17389256,17389530-17389624
Length = 549
Score = 35.5 bits (78), Expect = 0.029
Identities = 18/70 (25%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 302 VTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG 478
V P+ ++++G++ K K+ G+ + +V+ EIETDK + + G + ++ +G
Sbjct: 154 VGMPALSPTMNQGNIAKWRKQEGEKIEVGDVICEIETDKATLEFESLEEGYLAKILAPEG 213
Query: 479 -ETVKAGQKL 505
+ V+ GQ +
Sbjct: 214 SKDVQVGQPI 223
>06_01_0037 -
369498-369568,369668-369760,369889-369991,370061-370156,
370227-370293,370379-370446,370606-370681,370890-370975,
371065-371150,371337-371409,371490-371735,371845-371937,
372045-372119,372496-372540,372631-372708,372805-372921,
373865-373894
Length = 500
Score = 35.5 bits (78), Expect = 0.029
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 356 KKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG-ETVKAGQ 499
KK GD V+ EV+ E+ETDK + + G + ++ DG + +K G+
Sbjct: 98 KKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDGAKEIKVGE 146
>08_02_0759 -
20851828-20851932,20852190-20852285,20853231-20853314,
20853411-20853481,20853568-20853655,20853745-20853936,
20854044-20854931
Length = 507
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 296 QDVTTPSFPDSVSEGD-VKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVK 472
+++ P+ +++EG V GD VA + V+ +E+DK + V G++ + V
Sbjct: 47 REIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVP 106
Query: 473 DGETVKAG 496
GE+ G
Sbjct: 107 AGESAPVG 114
>12_01_0402 - 3179365-3180343,3180907-3182530,3183357-3183768
Length = 1004
Score = 33.1 bits (72), Expect = 0.16
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +1
Query: 55 TKRQRQN-KR*VRSISENATT--LLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTE 225
T+ QN + +++ SEN T +L + D +P HP N NAQ + +
Sbjct: 390 TENSSQNIAKKLQTASENPPTFAVLSSRSDVLPEDQKEHPAA--NLNAQIESPEDHKEVD 447
Query: 226 PTESSGRPQSSSI 264
PT +SG P SS +
Sbjct: 448 PTTASGIPSSSGV 460
>04_04_0323 - 24392043-24393021,24393135-24393544
Length = 462
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -1
Query: 441 PGAMTGMAVLSVSISRTTSSAATLSPTFLSNLTSPSETESGKLGVVTSCSTSRG 280
PGA + SV ++ +SA + SPT S S S + S S ST+ G
Sbjct: 221 PGAASCFPFCSVGATKPAASADSPSPTSTSRTASASSSSSSSTATTASSSTAAG 274
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 31.9 bits (69), Expect = 0.36
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +2
Query: 296 QDVTTPSFPDSVSEGD-VKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVK 472
+++ P+ +++EG V GD VA + V+ +E+DK + V G++ + V
Sbjct: 42 REIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVP 101
Query: 473 DGETVKAGQKLFRLEITGEAPKKAAATEA 559
GE+ G + + E+ ++ A +A
Sbjct: 102 AGESAPVGAP---IALLAESEEEVAVAQA 127
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +2
Query: 296 QDVTTPSFPDSVSEGD-VKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVK 472
+++ P+ +++EG V GD +A + V+ +E+DK + V G + + V
Sbjct: 50 REIFMPALSSTMTEGKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGFLAAVLVP 109
Query: 473 DGETVKAGQKLFRL-EITGEAP 535
GE+ G + L E E P
Sbjct: 110 AGESAPVGSAIALLAESEDEIP 131
>01_06_1196 + 35322662-35324212
Length = 516
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 275 TNPLLVEQDVTTPSFPDSVSEGDVKLDKKVGDSVAADEVVLEIETDKTAIPV---MAPGH 445
T+P+L E +T P+ D +G V ++++ D + A V ++ P+ P
Sbjct: 10 TSPILTEYHITVPALHDGSMQGSVHHERRLLDCLRATPSVEWLKNINLCSPLTNFRLPST 69
Query: 446 GVIKELYVK 472
GV + L+V+
Sbjct: 70 GVRRYLHVE 78
>12_02_0228 + 15903452-15903812,15904153-15904202,15904615-15904713,
15907146-15907415,15908045-15908125,15909033-15909599,
15909677-15910053,15910326-15911613
Length = 1030
Score = 28.7 bits (61), Expect = 3.4
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = -1
Query: 480 SPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLTSPSETESGKLGVVT 301
SPS + S P + +AV S + S T +SA+ SP F + LTS + G
Sbjct: 843 SPSFAFGS-SAPGSSPVFSLAVGSGTTSATPASAS--SPIFCNRLTSTNAPPFGSPATSP 899
Query: 300 SCSTSRGFVKWMDAT 256
STS + AT
Sbjct: 900 FSSTSSPVFSFTSAT 914
>10_08_0262 +
16307003-16308416,16309501-16309595,16309954-16309959,
16310567-16310671
Length = 539
Score = 28.7 bits (61), Expect = 3.4
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = -1
Query: 561 GASVAAAFLGA-SPVISNLNSFCPALTVSPSLTYNSLMTPWPGAMTG-MAVLSVSISRTT 388
G + +F A PV+S+ +CPAL + Y S M P A+ G + + + I R
Sbjct: 42 GHPIEVSFRAALPPVLSDFYVYCPALQLQEPADYPS-MVPKAIAVDGDLFLFRIPIDRVG 100
Query: 387 SSAATLSPTFLSNLTSP 337
+ + T + F+ SP
Sbjct: 101 TMSLTHNDYFVYMARSP 117
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 278 NPLLVEQ--DVTTPSFPDSVSEGDVKLDKKVGDSVAADEVVLEIETDKTA 421
+PL V+ V P+ PD + D+++ KK+G +V E++ + DK A
Sbjct: 178 SPLAVDAALSVVDPAHPDLLDLRDIRVVKKLGGTVDDTELIRGLIFDKKA 227
>07_03_0852 - 22020159-22021388
Length = 409
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 422 IPVMAPGHGVIKELYVKDGETVKAGQKLFRLEITGEA 532
+P APGH +++ V++GE K G FR I G A
Sbjct: 276 LPSSAPGHDIVECAIVEEGEG-KIGMFAFRNYIAGYA 311
>04_03_0151 + 11905926-11906618
Length = 230
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 100 ENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTR 213
+ +TLL HP +S P HP V++SNA + R
Sbjct: 148 QRGSTLLRQHPRQA-SSAPGHPAVVSSSNAPRIAPIQR 184
>03_06_0581 +
34886728-34886817,34886990-34887175,34887332-34887543,
34888161-34888318,34888615-34888773,34888921-34888973,
34889265-34889405,34889788-34889823,34890542-34890776,
34891017-34891144
Length = 465
Score = 28.3 bits (60), Expect = 4.4
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = -1
Query: 549 AAAFLGASPVISNLNSFCPALTVSPSLTYNSLMT-PWPGA-MTGMAVLSVSISRTTS-SA 379
AAA L SPV + P + V P N+L T + G M++ S S S T + S
Sbjct: 140 AAALLDVSPVTDVTSISEPRVFVRPIYAGNALCTVRYTGEDPCMMSIRSTSFSPTEAMSE 199
Query: 378 ATLSPTFLSNLTSPSETESGK 316
A ++P +L+ SE SGK
Sbjct: 200 AKVAPITQVDLSFLSEGSSGK 220
>01_01_0842 -
6571432-6571487,6571586-6571675,6571967-6572274,
6572872-6573037,6573659-6573841,6574321-6574426,
6574537-6574701,6575202-6575262,6577147-6577208
Length = 398
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +1
Query: 133 DAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPACRARCDHS 312
+ +PA+G HP+++N+ N + N T G S+ + SP+ A +H+
Sbjct: 230 NGIPAAGGYHPIRMNSGNDM----VVDNGAPETAHVGATCSAMSSEMAVSPSSAASSNHA 285
Query: 313 KF 318
F
Sbjct: 286 PF 287
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 118 LEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPACRA 297
++A PDA P + +N S+A T+ PT SS R ++ S H HE P
Sbjct: 74 VDAVPDAAPQLSSGNHAHMN-SDAD--ATVLHASRLPTHSSSRDETKSNHTAHE-PESGG 129
Query: 298 RCDHSK 315
D +K
Sbjct: 130 DADDTK 135
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 217 QTEPTESSGRPQSSSIHPLHESPA 288
Q +P E++GR SSS+ P ES A
Sbjct: 9 QPQPQEAAGREASSSLSPAKESAA 32
>05_07_0331 -
29324967-29326256,29326919-29327020,29327226-29327278,
29327628-29327674,29327762-29327841,29327933-29328016,
29328383-29328433,29328925-29329050,29329231-29329347,
29329710-29329851,29329986-29330053,29330509-29330608,
29330713-29330840,29330929-29330997,29331083-29331205
Length = 859
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -1
Query: 483 VSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLTSPSETE 325
V P T+ + WPG+M+ VL S +SAA S +++ S TE
Sbjct: 685 VGPDGTFTDVCIGWPGSMSDEQVLRKSALHQRASAAAGSMSWVVGGASYPLTE 737
>05_03_0515 + 14930736-14932697
Length = 653
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 55 TKRQRQNKR*VRSISENATTLLEAHPDAVPASGPV 159
T+ +R R+ISE LL HP+ +P SG V
Sbjct: 475 TRERRHLMDACRTISEYMCYLLVVHPEMLPVSGSV 509
>02_04_0533 + 23719353-23719910,23720012-23720418,23720690-23721023
Length = 432
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 338 GDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHG 448
GD+ LD + D++ + E+ D+TA+P+ P G
Sbjct: 2 GDLILDPYMEDAILDHSCLAELLADQTALPLFHPYSG 38
>01_01_1149 -
9134390-9134600,9134732-9134790,9135650-9135724,
9135815-9135934,9136012-9136183,9136277-9136335,
9136516-9136572,9136900-9136998,9137088-9137114,
9137607-9137649,9137779-9138023
Length = 388
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 516 SNLNSFCPALTVSPSLTYNSL-MTPWPGAMTGMAVLSVSISRT 391
S ++ F PA + L NSL + PW + GM+VL + T
Sbjct: 212 SLVSEFSPAQYAASPLIKNSLSVVPWMSLLLGMSVLHFLVGTT 254
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,395,461
Number of Sequences: 37544
Number of extensions: 369462
Number of successful extensions: 1303
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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