Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27g08
         (487 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118852-1|AAM50712.1|   95|Drosophila melanogaster GM16138p pro...   129   2e-30
AE013599-7|EAA46159.1|   95|Drosophila melanogaster CG40127-PA p...   129   2e-30
AE013599-3344|AAF46807.1|  107|Drosophila melanogaster CG11269-P...    60   2e-09
AY118539-1|AAM49908.1|  324|Drosophila melanogaster LD27322p pro...    28   5.9  
AE014297-2611|AAF55621.2|  324|Drosophila melanogaster CG6005-PA...    28   5.9  

>AY118852-1|AAM50712.1|   95|Drosophila melanogaster GM16138p
           protein.
          Length = 95

 Score =  129 bits (312), Expect = 2e-30
 Identities = 54/92 (58%), Positives = 74/92 (80%)
 Frame = +3

Query: 99  KLCGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIEVEK 278
           K+CGPKLSLCGL++SVWGI+QL LMG+F+YI +VAL+EDLP +E+   HS+EDF     +
Sbjct: 2   KICGPKLSLCGLIISVWGIVQLVLMGLFFYINSVALIEDLPLEEEY--HSLEDFYAAANR 59

Query: 279 GYTLNAQNCWIAALLYLITLVVSGHQFWLNNR 374
            Y  NA NCWIAA +Y++TL++S  QF++N+R
Sbjct: 60  AYNQNAYNCWIAACIYVLTLLLSAQQFYMNSR 91


>AE013599-7|EAA46159.1|   95|Drosophila melanogaster CG40127-PA
           protein.
          Length = 95

 Score =  129 bits (312), Expect = 2e-30
 Identities = 54/92 (58%), Positives = 74/92 (80%)
 Frame = +3

Query: 99  KLCGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIEVEK 278
           K+CGPKLSLCGL++SVWGI+QL LMG+F+YI +VAL+EDLP +E+   HS+EDF     +
Sbjct: 2   KICGPKLSLCGLIISVWGIVQLVLMGLFFYINSVALIEDLPLEEEY--HSLEDFYAAANR 59

Query: 279 GYTLNAQNCWIAALLYLITLVVSGHQFWLNNR 374
            Y  NA NCWIAA +Y++TL++S  QF++N+R
Sbjct: 60  AYNQNAYNCWIAACIYVLTLLLSAQQFYMNSR 91


>AE013599-3344|AAF46807.1|  107|Drosophila melanogaster CG11269-PA
           protein.
          Length = 107

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 28/75 (37%), Positives = 44/75 (58%)
 Frame = +3

Query: 105 CGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIEVEKGY 284
           CG K  L  L +S WG + L L+G+F+Y++++ LLE LP     P  S E F  + ++ Y
Sbjct: 3   CGRKCCLFCLFMSAWGFLMLNLLGIFFYVQSLMLLESLPLPHHFP--SQEAFKEQADEAY 60

Query: 285 TLNAQNCWIAALLYL 329
              +  C++AA+ YL
Sbjct: 61  QDVSTRCFVAAVFYL 75


>AY118539-1|AAM49908.1|  324|Drosophila melanogaster LD27322p
           protein.
          Length = 324

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +3

Query: 186 YIRAVALLEDLPFDEKNPPHSIEDF-VIEVEKGYTLNAQNCWIAALLYLITLVVSG 350
           Y +  +L + LPFD   P H ++DF +I  E      A +    +L  LI  + SG
Sbjct: 237 YRQQQSLSDILPFDISPPGHIVDDFCIIASEANSVSQASDAQARSLKQLIRNIGSG 292


>AE014297-2611|AAF55621.2|  324|Drosophila melanogaster CG6005-PA
           protein.
          Length = 324

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +3

Query: 186 YIRAVALLEDLPFDEKNPPHSIEDF-VIEVEKGYTLNAQNCWIAALLYLITLVVSG 350
           Y +  +L + LPFD   P H ++DF +I  E      A +    +L  LI  + SG
Sbjct: 237 YRQQQSLSDILPFDISPPGHIVDDFCIIASEANSVSQASDAQARSLKQLIRNIGSG 292


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,202,190
Number of Sequences: 53049
Number of extensions: 410649
Number of successful extensions: 989
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)