Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27f18
         (423 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    25   1.1  
AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    25   1.1  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    25   1.1  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    23   3.5  
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    23   6.0  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    22   8.0  

>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 209 DAVSRHVDKKYKYTYSESGARLPP 280
           D+ S H+++  + T+S +  RLPP
Sbjct: 65  DSGSSHLERTIELTFSPADCRLPP 88


>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = -1

Query: 315 GSPCFATLF--GAEGGSLAPDSLYVYLYFLSTCLLTASLQFPYFKLL 181
           G  C A L   G +  SLA  SLY   YF  T L T     P  +L+
Sbjct: 230 GDYCVARLRREGHDACSLAARSLYECYYFADTLLPTFERILPLLRLV 276


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = -1

Query: 315 GSPCFATLF--GAEGGSLAPDSLYVYLYFLSTCLLTASLQFPYFKLL 181
           G  C A L   G +  SLA  SLY   YF  T L T     P  +L+
Sbjct: 230 GDYCVARLRREGHDACSLAARSLYECYYFADTLLPTFERILPLLRLV 276


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +2

Query: 155 VKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARL 274
           VK +AK   +  KYGN  DA+         ++Y     ++
Sbjct: 343 VKSLAKRYGTQYKYGNVIDAIYPASGSSVDWSYGAQDVKI 382


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 228 WIKNTNIRTASRGRDYRP 281
           WI+  N++ +S  R+Y P
Sbjct: 206 WIEGDNVQNSSDSRNYGP 223


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 269 SPPTRCTYICI 237
           SP TRC Y CI
Sbjct: 184 SPETRCLYHCI 194


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,505
Number of Sequences: 2352
Number of extensions: 7904
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 35060166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)