Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27f18
         (423 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4234|AAF56792.1|  421|Drosophila melanogaster CG1894-PA...    31   0.63 
BT001721-1|AAN71476.1| 1120|Drosophila melanogaster RE69223p pro...    29   1.9  
AE014296-348|AAS64933.1| 1120|Drosophila melanogaster CG13921-PB...    29   1.9  
AE014296-347|AAF47561.2| 1314|Drosophila melanogaster CG13921-PA...    29   1.9  
BT025858-1|ABF85758.1|  592|Drosophila melanogaster IP15543p pro...    28   5.9  
AE014298-3105|AAF50838.2| 1570|Drosophila melanogaster CG1494-PA...    28   5.9  
AE014134-1591|AAF52734.1|  275|Drosophila melanogaster CG9555-PA...    27   7.8  

>AE014297-4234|AAF56792.1|  421|Drosophila melanogaster CG1894-PA
           protein.
          Length = 421

 Score = 31.1 bits (67), Expect = 0.63
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -2

Query: 284 PRAVVSPPTRCTYICIFYPR-VCLQRLYNFHILNC-WRCP 171
           P  V++      Y+C F  + +CL++ Y++H+ +C  RCP
Sbjct: 163 PYPVINDKATTIYVCEFCLKYMCLRKSYSYHLYDCKKRCP 202


>BT001721-1|AAN71476.1| 1120|Drosophila melanogaster RE69223p
           protein.
          Length = 1120

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 251 YSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIM 376
           Y   G   P S PNS A++G   YLQP   L+   G + + +
Sbjct: 658 YGVWGPPPPYSDPNSPARRGYYQYLQPTACLVGNQGTVAVTL 699


>AE014296-348|AAS64933.1| 1120|Drosophila melanogaster CG13921-PB,
           isoform B protein.
          Length = 1120

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 251 YSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIM 376
           Y   G   P S PNS A++G   YLQP   L+   G + + +
Sbjct: 658 YGVWGPPPPYSDPNSPARRGYYQYLQPTACLVGNQGTVAVTL 699


>AE014296-347|AAF47561.2| 1314|Drosophila melanogaster CG13921-PA,
           isoform A protein.
          Length = 1314

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 251 YSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIM 376
           Y   G   P S PNS A++G   YLQP   L+   G + + +
Sbjct: 852 YGVWGPPPPYSDPNSPARRGYYQYLQPTACLVGNQGTVAVTL 893


>BT025858-1|ABF85758.1|  592|Drosophila melanogaster IP15543p
           protein.
          Length = 592

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -1

Query: 402 SMAYGSLLFI-IN*ITPDLVISTVCGCKYSGSPCFATLFGAEGGSLAPDSLYVYLYFLST 226
           S+ + S L++ +  +   L+   V  CK   S      F +E  SLA DSL+ Y++ L  
Sbjct: 521 SVLFASPLYVCVPHVRMSLLSPVVVTCKTFSSTSLHRRFVSEV-SLAHDSLFTYIHILIL 579

Query: 225 CLL 217
           C +
Sbjct: 580 CFI 582


>AE014298-3105|AAF50838.2| 1570|Drosophila melanogaster CG1494-PA
            protein.
          Length = 1570

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/61 (22%), Positives = 28/61 (45%)
 Frame = -1

Query: 336  VCGCKYSGSPCFATLFGAEGGSLAPDSLYVYLYFLSTCLLTASLQFPYFKLLAMSLATNL 157
            +CG    G  CF+  +     S+  +  ++ +Y ++T +    + +  FKL+ M    N 
Sbjct: 1196 LCGINSIGLVCFSQFYRTHPESMLLEPTFMAMYTVATVICKLFMIYE-FKLICMDPVVNF 1254

Query: 156  T 154
            T
Sbjct: 1255 T 1255


>AE014134-1591|AAF52734.1|  275|Drosophila melanogaster CG9555-PA
           protein.
          Length = 275

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 384 LLFIIN*ITPDLVISTVCGCKYSGSPCFATL-FG 286
           + FI++   P L I TVCGC    S CF  L FG
Sbjct: 210 IYFILDWERPGLAIGTVCGCVVLVS-CFCVLVFG 242


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,689,462
Number of Sequences: 53049
Number of extensions: 343339
Number of successful extensions: 1053
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)