Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27f14
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017286-1|AAH17286.1| 112|Homo sapiens family with sequence si... 94 3e-19
BC004447-1|AAH04447.1| 69|Homo sapiens FAM32A protein protein. 94 3e-19
BC000639-1|AAH00639.1| 112|Homo sapiens family with sequence si... 94 3e-19
AF151902-1|AAD34139.1| 112|Homo sapiens CGI-144 protein protein. 94 3e-19
X98133-1|CAA66832.1| 348|Homo sapiens histamine H2 receptor pro... 29 7.5
M64799-1|AAA58647.1| 359|Homo sapiens histamine H2 receptor pro... 29 7.5
D49783-1|BAA08618.1| 359|Homo sapiens Human histamine H2 recept... 29 7.5
BC093980-1|AAH93980.1| 404|Homo sapiens sorting nexin 5 protein. 29 7.5
BC093623-1|AAH93623.1| 404|Homo sapiens sorting nexin 5 protein. 29 7.5
BC062638-1|AAH62638.1| 412|Homo sapiens SNX5 protein protein. 29 7.5
BC054510-1|AAH54510.1| 397|Homo sapiens HRH2 protein protein. 29 7.5
AY136744-1|AAN01270.1| 359|Homo sapiens histamine receptor H2 p... 29 7.5
AL121585-2|CAC00471.1| 404|Homo sapiens sorting nexin 5 protein. 29 7.5
AK223308-1|BAD97028.1| 404|Homo sapiens sorting nexin 5 variant... 29 7.5
AK001793-1|BAA91914.1| 404|Homo sapiens protein ( Homo sapiens ... 29 7.5
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 29 7.5
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 29 7.5
AF121855-1|AAD27828.1| 404|Homo sapiens sorting nexin 5 protein. 29 7.5
AB041384-1|BAA94469.1| 359|Homo sapiens histamine H2 receptor p... 29 7.5
AB023486-1|BAA84279.1| 359|Homo sapiens histamine H2 receptor p... 29 7.5
>BC017286-1|AAH17286.1| 112|Homo sapiens family with sequence
similarity 32, member A protein.
Length = 112
Score = 93.9 bits (223), Expect = 3e-19
Identities = 40/58 (68%), Positives = 50/58 (86%)
Frame = +3
Query: 291 VDRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 464
+D+RT A+ A++ MQEK Q +RIL+KA THKQRVE FN+HLD+LTEH+DIPKVSWTK
Sbjct: 55 LDKRTPAQAAFEKMQEKRQMERILKKASKTHKQRVEDFNRHLDTLTEHYDIPKVSWTK 112
>BC004447-1|AAH04447.1| 69|Homo sapiens FAM32A protein protein.
Length = 69
Score = 93.9 bits (223), Expect = 3e-19
Identities = 40/58 (68%), Positives = 50/58 (86%)
Frame = +3
Query: 291 VDRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 464
+D+RT A+ A++ MQEK Q +RIL+KA THKQRVE FN+HLD+LTEH+DIPKVSWTK
Sbjct: 12 LDKRTPAQAAFEKMQEKRQMERILKKASKTHKQRVEDFNRHLDTLTEHYDIPKVSWTK 69
>BC000639-1|AAH00639.1| 112|Homo sapiens family with sequence
similarity 32, member A protein.
Length = 112
Score = 93.9 bits (223), Expect = 3e-19
Identities = 40/58 (68%), Positives = 50/58 (86%)
Frame = +3
Query: 291 VDRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 464
+D+RT A+ A++ MQEK Q +RIL+KA THKQRVE FN+HLD+LTEH+DIPKVSWTK
Sbjct: 55 LDKRTPAQAAFEKMQEKRQMERILKKASKTHKQRVEDFNRHLDTLTEHYDIPKVSWTK 112
>AF151902-1|AAD34139.1| 112|Homo sapiens CGI-144 protein protein.
Length = 112
Score = 93.9 bits (223), Expect = 3e-19
Identities = 40/58 (68%), Positives = 50/58 (86%)
Frame = +3
Query: 291 VDRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 464
+D+RT A+ A++ MQEK Q +RIL+KA THKQRVE FN+HLD+LTEH+DIPKVSWTK
Sbjct: 55 LDKRTPAQAAFEKMQEKRQMERILKKASKTHKQRVEDFNRHLDTLTEHYDIPKVSWTK 112
>X98133-1|CAA66832.1| 348|Homo sapiens histamine H2 receptor
protein.
Length = 348
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -1
Query: 173 CLVDTGIFVIITHLNKILILLFEK*NVGTF*LVSINLGCNRKLKKYTLCYVRGFTI 6
CL T + IT + +LIL+ NV +V + +G NR+L+ T C++ I
Sbjct: 8 CLDSTACKITITVVLAVLILITVAGNV----VVCLAVGLNRRLRNLTNCFIVSLAI 59
>M64799-1|AAA58647.1| 359|Homo sapiens histamine H2 receptor
protein.
Length = 359
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -1
Query: 173 CLVDTGIFVIITHLNKILILLFEK*NVGTF*LVSINLGCNRKLKKYTLCYVRGFTI 6
CL T + IT + +LIL+ NV +V + +G NR+L+ T C++ I
Sbjct: 11 CLDSTACKITITVVLAVLILITVAGNV----VVCLAVGLNRRLRNLTNCFIVSLAI 62
>D49783-1|BAA08618.1| 359|Homo sapiens Human histamine H2 receptor
protein.
Length = 359
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -1
Query: 173 CLVDTGIFVIITHLNKILILLFEK*NVGTF*LVSINLGCNRKLKKYTLCYVRGFTI 6
CL T + IT + +LIL+ NV +V + +G NR+L+ T C++ I
Sbjct: 11 CLDSTACKITITVVLAVLILITVAGNV----VVCLAVGLNRRLRNLTNCFIVSLAI 62
>BC093980-1|AAH93980.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 297 RRTKAEIAYQNMQEKMQKQRILQK----AEMTHKQRVEKFNQHLDSLTE 431
RRTKA I Y+N + + K R+ K AE ++ +KF Q +S E
Sbjct: 311 RRTKALIDYENSNKALDKARLKSKDVKLAEAHQQECCQKFEQLSESAKE 359
>BC093623-1|AAH93623.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 297 RRTKAEIAYQNMQEKMQKQRILQK----AEMTHKQRVEKFNQHLDSLTE 431
RRTKA I Y+N + + K R+ K AE ++ +KF Q +S E
Sbjct: 311 RRTKALIDYENSNKALDKARLKSKDVKLAEAHQQECCQKFEQLSESAKE 359
>BC062638-1|AAH62638.1| 412|Homo sapiens SNX5 protein protein.
Length = 412
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 297 RRTKAEIAYQNMQEKMQKQRILQK----AEMTHKQRVEKFNQHLDSLTE 431
RRTKA I Y+N + + K R+ K AE ++ +KF Q +S E
Sbjct: 319 RRTKALIDYENSNKALDKARLKSKDVKLAEAHQQECCQKFEQLSESAKE 367
>BC054510-1|AAH54510.1| 397|Homo sapiens HRH2 protein protein.
Length = 397
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -1
Query: 173 CLVDTGIFVIITHLNKILILLFEK*NVGTF*LVSINLGCNRKLKKYTLCYVRGFTI 6
CL T + IT + +LIL+ NV +V + +G NR+L+ T C++ I
Sbjct: 11 CLDSTACKITITVVLAVLILITVAGNV----VVCLAVGLNRRLRNLTNCFIVSLAI 62
>AY136744-1|AAN01270.1| 359|Homo sapiens histamine receptor H2
protein.
Length = 359
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -1
Query: 173 CLVDTGIFVIITHLNKILILLFEK*NVGTF*LVSINLGCNRKLKKYTLCYVRGFTI 6
CL T + IT + +LIL+ NV +V + +G NR+L+ T C++ I
Sbjct: 11 CLDSTACKITITVVLAVLILITVAGNV----VVCLAVGLNRRLRNLTNCFIVSLAI 62
>AL121585-2|CAC00471.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 297 RRTKAEIAYQNMQEKMQKQRILQK----AEMTHKQRVEKFNQHLDSLTE 431
RRTKA I Y+N + + K R+ K AE ++ +KF Q +S E
Sbjct: 311 RRTKALIDYENSNKALDKARLKSKDVKLAEAHQQECCQKFEQLSESAKE 359
>AK223308-1|BAD97028.1| 404|Homo sapiens sorting nexin 5 variant
protein.
Length = 404
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 297 RRTKAEIAYQNMQEKMQKQRILQK----AEMTHKQRVEKFNQHLDSLTE 431
RRTKA I Y+N + + K R+ K AE ++ +KF Q +S E
Sbjct: 311 RRTKALIDYENSNKALDKARLKSKDVKLAEAHQQECCQKFEQLSESAKE 359
>AK001793-1|BAA91914.1| 404|Homo sapiens protein ( Homo sapiens
cDNA FLJ10931 fis, clone OVARC1000564. ).
Length = 404
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 297 RRTKAEIAYQNMQEKMQKQRILQK----AEMTHKQRVEKFNQHLDSLTE 431
RRTKA I Y+N + + K R+ K AE ++ +KF Q +S E
Sbjct: 311 RRTKALIDYENSNKALDKARLKSKDVKLAEAHQQECCQKFEQLSESAKE 359
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +3
Query: 294 DRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEH 434
D++ + + ++++E+ K+R+ + +QR+ FNQ D L H
Sbjct: 1992 DQKEELLKSIEDIEERTDKERLKEPTRQALQQRLRVFNQLEDELNSH 2038
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +3
Query: 294 DRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEH 434
D++ + + ++++E+ K+R+ + +QR+ FNQ D L H
Sbjct: 1985 DQKEELLKSIEDIEERTDKERLKEPTRQALQQRLRVFNQLEDELNSH 2031
>AF121855-1|AAD27828.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 297 RRTKAEIAYQNMQEKMQKQRILQK----AEMTHKQRVEKFNQHLDSLTE 431
RRTKA I Y+N + + K R+ K AE ++ +KF Q +S E
Sbjct: 311 RRTKALIDYENSNKALDKARLKSKDVKLAEAHQQECCQKFEQLSESAKE 359
>AB041384-1|BAA94469.1| 359|Homo sapiens histamine H2 receptor
protein.
Length = 359
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -1
Query: 173 CLVDTGIFVIITHLNKILILLFEK*NVGTF*LVSINLGCNRKLKKYTLCYVRGFTI 6
CL T + IT + +LIL+ NV +V + +G NR+L+ T C++ I
Sbjct: 11 CLDSTACKITITVVLAVLILITVAGNV----VVCLAVGLNRRLRNLTNCFIVSLAI 62
>AB023486-1|BAA84279.1| 359|Homo sapiens histamine H2 receptor
protein.
Length = 359
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -1
Query: 173 CLVDTGIFVIITHLNKILILLFEK*NVGTF*LVSINLGCNRKLKKYTLCYVRGFTI 6
CL T + IT + +LIL+ NV +V + +G NR+L+ T C++ I
Sbjct: 11 CLDSTACKITITVVLAVLILITVAGNV----VVCLAVGLNRRLRNLTNCFIVSLAI 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,077,438
Number of Sequences: 237096
Number of extensions: 736385
Number of successful extensions: 1761
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1761
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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