Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27f14
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93785-7|CAB07863.1| 107|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z93785-6|CAB07862.1| 104|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z92803-12|CAB07248.1| 107|Caenorhabditis elegans Hypothetical p... 59 2e-09
Z92803-11|CAB07247.1| 104|Caenorhabditis elegans Hypothetical p... 59 2e-09
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 31 0.38
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 31 0.38
Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical pr... 27 6.2
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF100669-11|AAK39270.2| 737|Caenorhabditis elegans Dipeptidyl p... 27 8.1
>Z93785-7|CAB07863.1| 107|Caenorhabditis elegans Hypothetical
protein K01G5.8b protein.
Length = 107
Score = 58.8 bits (136), Expect = 2e-09
Identities = 23/55 (41%), Positives = 41/55 (74%)
Frame = +3
Query: 300 RTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 464
+T+AE+ ++ ++ +R+L++A ++H+++VEK N+ L +TE DIPKVSWTK
Sbjct: 53 KTEAELRFEARRQANMAERMLKQAALSHREKVEKLNKQLGEMTEFNDIPKVSWTK 107
>Z93785-6|CAB07862.1| 104|Caenorhabditis elegans Hypothetical
protein K01G5.8a protein.
Length = 104
Score = 58.8 bits (136), Expect = 2e-09
Identities = 23/55 (41%), Positives = 41/55 (74%)
Frame = +3
Query: 300 RTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 464
+T+AE+ ++ ++ +R+L++A ++H+++VEK N+ L +TE DIPKVSWTK
Sbjct: 50 KTEAELRFEARRQANMAERMLKQAALSHREKVEKLNKQLGEMTEFNDIPKVSWTK 104
>Z92803-12|CAB07248.1| 107|Caenorhabditis elegans Hypothetical
protein K01G5.8b protein.
Length = 107
Score = 58.8 bits (136), Expect = 2e-09
Identities = 23/55 (41%), Positives = 41/55 (74%)
Frame = +3
Query: 300 RTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 464
+T+AE+ ++ ++ +R+L++A ++H+++VEK N+ L +TE DIPKVSWTK
Sbjct: 53 KTEAELRFEARRQANMAERMLKQAALSHREKVEKLNKQLGEMTEFNDIPKVSWTK 107
>Z92803-11|CAB07247.1| 104|Caenorhabditis elegans Hypothetical
protein K01G5.8a protein.
Length = 104
Score = 58.8 bits (136), Expect = 2e-09
Identities = 23/55 (41%), Positives = 41/55 (74%)
Frame = +3
Query: 300 RTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 464
+T+AE+ ++ ++ +R+L++A ++H+++VEK N+ L +TE DIPKVSWTK
Sbjct: 50 KTEAELRFEARRQANMAERMLKQAALSHREKVEKLNKQLGEMTEFNDIPKVSWTK 104
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 31.5 bits (68), Expect = 0.38
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +3
Query: 285 TNVDRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFD 440
TN R + + QEK Q +++++ E TH+ R+++ + L + D
Sbjct: 2097 TNKQREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQLEDQIAILRDQLD 2148
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 31.5 bits (68), Expect = 0.38
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +3
Query: 285 TNVDRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFD 440
TN R + + QEK Q +++++ E TH+ R+++ + L + D
Sbjct: 2170 TNKQREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQLEDQIAILRDQLD 2221
>Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 292 SIEEPKPRLHIKICRKKCKNKEYYKR 369
S + K L +K CR+K KN+E YK+
Sbjct: 184 SSKREKNNLAVKRCREKKKNEEKYKK 209
>Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 292 SIEEPKPRLHIKICRKKCKNKEYYKR 369
S + K L +K CR+K KN+E YK+
Sbjct: 184 SSKREKNNLAVKRCREKKKNEEKYKK 209
>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
protein F37A4.4 protein.
Length = 1163
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 309 AEIAYQNMQEKMQKQRILQKAEMTHKQRVEKF 404
A+ ++ N Q K +Q I + THK+++E+F
Sbjct: 881 ADRSFLNPQNKTAEQMIPVNYQETHKEKIERF 912
>AF100669-11|AAK39270.2| 737|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 5 protein.
Length = 737
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 354 RILQKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK*NHEXQRIQFSIVN 506
R +Q ++T +QRV + +T+ + + VS N+E QR +S N
Sbjct: 56 RAMQLNKLTRQQRVSLIGKKGPEVTDRYLMTSVSVPMCNYENQRSVYSASN 106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,976,263
Number of Sequences: 27780
Number of extensions: 137520
Number of successful extensions: 392
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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