Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27f09
(587 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.83
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.83
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.83
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.83
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.83
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 23 1.4
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 23 1.4
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 22 4.4
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 21 5.8
AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 21 5.8
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 21 5.8
EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 ... 21 7.7
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 21 7.7
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 24.2 bits (50), Expect = 0.83
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 292 KPFSNEGKPLVVQFTVKHEQDID 360
+P +NE +PL V+F + +Q ID
Sbjct: 20 RPVANESEPLEVKFGLTLQQIID 42
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 24.2 bits (50), Expect = 0.83
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 292 KPFSNEGKPLVVQFTVKHEQDID 360
+P +NE +PL V+F + +Q ID
Sbjct: 20 RPVANESEPLEVKFGLTLQQIID 42
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 24.2 bits (50), Expect = 0.83
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 292 KPFSNEGKPLVVQFTVKHEQDID 360
+P +NE +PL V+F + +Q ID
Sbjct: 20 RPVANESEPLEVKFGLTLQQIID 42
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 24.2 bits (50), Expect = 0.83
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 292 KPFSNEGKPLVVQFTVKHEQDID 360
+P +NE +PL V+F + +Q ID
Sbjct: 20 RPVANESEPLEVKFGLTLQQIID 42
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 24.2 bits (50), Expect = 0.83
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 292 KPFSNEGKPLVVQFTVKHEQDID 360
+P +NE +PL V+F + +Q ID
Sbjct: 20 RPVANESEPLEVKFGLTLQQIID 42
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 23.4 bits (48), Expect = 1.4
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 184 FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSR 285
FGK T FFSD + D + D Y L R
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQISD-NLYILCR 235
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 23.4 bits (48), Expect = 1.4
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 184 FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSR 285
FGK T FFSD + D + D Y L R
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQISD-NLYILCR 235
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.8 bits (44), Expect = 4.4
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -2
Query: 148 FPTNHQETSPQRIH 107
FP NH P+++H
Sbjct: 41 FPLNHLNEEPEKLH 54
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 84 QQADNDQYNSFHFRFTVPPSSTKDRP 7
Q +D YNSFH ++ S + P
Sbjct: 470 QTESSDNYNSFHQFYSSESSQNQVAP 495
>AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor
candidate 60 protein.
Length = 364
Score = 21.4 bits (43), Expect = 5.8
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -2
Query: 235 HPLGR*RTFQQSI*TFQILFLGAHCTPNCFPTN 137
+P+G S+ F ++FL CT C N
Sbjct: 133 YPVGIVGVKNASLFIFDLIFLSFRCTKLCKEAN 165
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 84 QQADNDQYNSFHFRFTVPPSSTKDRP 7
Q +D YNSFH ++ S + P
Sbjct: 418 QTESSDNYNSFHQFYSSESSQNQVAP 443
>EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450
protein.
Length = 493
Score = 21.0 bits (42), Expect = 7.7
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 153 IAFPRIIRKLLLKEYITIYRR*CQQADNDQYNSFHFRF 40
I P I+RK+L+K++ R ++ +FH F
Sbjct: 79 IRSPEILRKVLVKDFDKFTNRNIATNESADPLAFHTLF 116
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 21.0 bits (42), Expect = 7.7
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 374 YPPPQSMSCSCLTVNWTTKGLP 309
YPPP S+ ++V T G P
Sbjct: 213 YPPPGSLGSMGVSVPCGTSGNP 234
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,633
Number of Sequences: 336
Number of extensions: 3662
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -