Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27f08
(397 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 32 0.19
01_05_0653 - 23948911-23948937,23949031-23949141,23949361-239494... 31 0.25
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 31 0.25
07_03_1022 - 23353054-23353263,23353399-23353505,23354613-23354961 31 0.44
08_02_0644 - 19658270-19658626,19659142-19659218,19659256-196594... 30 0.78
05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023 29 1.4
05_03_0069 + 8004235-8004350,8004927-8005215,8005314-8005375,800... 29 1.4
05_01_0251 + 1901709-1901864,1901968-1901999,1902534-1902664,190... 29 1.4
04_04_1393 - 33204699-33204806,33204927-33205164,33205581-332058... 29 1.4
03_05_0898 + 28610123-28610203,28611190-28611271,28611666-286117... 29 1.4
02_04_0005 - 18843061-18843201,18843309-18843440,18844457-188453... 29 1.8
12_01_1068 - 11052769-11052943,11053103-11053182,11053304-110534... 28 2.4
03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,970... 28 2.4
12_01_0035 - 295988-296408,296645-296813,296929-296965,297097-29... 27 4.1
09_04_0151 - 15154063-15154296,15155616-15155660,15155749-151558... 27 4.1
06_03_0189 - 17697779-17698939 27 4.1
04_01_0589 + 7704262-7704429,7704718-7705540,7705844-7706484 27 4.1
01_05_0421 + 21990034-21990392,21991691-21992681 27 4.1
12_01_0741 + 6649988-6653065 27 5.5
05_02_0119 + 6793292-6793613,6795793-6795952,6796416-6796458,679... 27 5.5
03_05_0781 + 27654764-27655429,27655902-27656004,27656535-276565... 27 5.5
01_06_1682 - 39130696-39131705,39132355-39132583 27 5.5
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423... 27 5.5
01_01_0016 - 88825-90411 27 5.5
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294... 27 7.2
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909 27 7.2
05_04_0295 + 19940822-19940906,19940976-19941902,19941956-19942866 27 7.2
01_06_0046 + 25943183-25943590 27 7.2
11_01_0037 - 280749-281196,281418-281568,281684-281720,281831-28... 26 9.6
09_01_0112 + 1737438-1737777,1738441-1738511,1738974-1739052,174... 26 9.6
05_06_0159 + 26069833-26069955,26070382-26070516,26070919-260709... 26 9.6
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 26 9.6
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 26 9.6
03_05_0696 - 26856413-26856416,26857917-26858524,26859041-268591... 26 9.6
02_02_0378 + 9561775-9562947 26 9.6
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 26 9.6
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 26 9.6
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 31.9 bits (69), Expect = 0.19
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 48 YNTPPPPLRY-PSNPATAIFTNAQTYN-NAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYN 221
YN P Y P++P+ + + + +Y+ +P Y P + N TS S S S + +P +
Sbjct: 1697 YNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTS 1756
Query: 222 KSKEPT 239
S PT
Sbjct: 1757 PSYSPT 1762
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 45 YYNTPPPPLRYPSNPATAIFTNAQTYN-NAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYN 221
Y +P P P++P+ + + +Y+ +P Y T + TS S S S + +P +
Sbjct: 1704 YSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTS 1763
Query: 222 KSKEPT 239
S PT
Sbjct: 1764 PSYSPT 1769
>01_05_0653 -
23948911-23948937,23949031-23949141,23949361-23949441,
23949865-23949984,23950088-23950252,23950344-23950493,
23950565-23950674,23951401-23951518,23951597-23951827,
23952345-23952524,23953639-23953908,23954930-23954979,
23955213-23955288,23955396-23955483,23956010-23956101,
23956200-23956529,23957484-23957593,23957810-23957907,
23959538-23959566
Length = 811
Score = 31.5 bits (68), Expect = 0.25
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 98 HIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSD 208
H HQ+ +QQ RAA +QQ + QQQ +L D
Sbjct: 100 HQHQQIQMQQMLLQRAAQQQQQQQQQQQQQQQQLHRD 136
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 31.5 bits (68), Expect = 0.25
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 107 QRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTD 238
Q +QQ RAA +QQ + QQQ + + QQ+QR D
Sbjct: 120 QHIQMQQMLLQRAAQQQQQQQQQQQQQQQQQQQQQQQQQQQRRD 163
>07_03_1022 - 23353054-23353263,23353399-23353505,23354613-23354961
Length = 221
Score = 30.7 bits (66), Expect = 0.44
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 57 PPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDT 176
PPPP P +P A+F +A+ +P P+TR ++ T
Sbjct: 5 PPPPSAPPPSPPRAVFPSARCCLPSPHRFLPSTRRKRLVT 44
>08_02_0644 -
19658270-19658626,19659142-19659218,19659256-19659430,
19659543-19659596,19659691-19659858,19660756-19660953,
19661546-19661632,19661739-19661827,19662499-19662955
Length = 553
Score = 29.9 bits (64), Expect = 0.78
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2
Query: 47 LQHPSAAAEVSL*SGNGHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQE 226
L P AAA SL + R R+++ AR++ + + + G D +V +E
Sbjct: 7 LSFPVAAASKSLSFPAAAQSNKGTPAARKRIKSGGGAREKKENSGGAREEQGKDDSVGEE 66
Query: 227 Q---RTDARRRR 253
Q R D RRRR
Sbjct: 67 QVQRRRDGRRRR 78
>05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023
Length = 620
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 47 LQHPSAAAEVSL*SGNGHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQE 226
L SA A V+L S H H RA A + +N P G+DR+ + E
Sbjct: 540 LPRRSACASVALKSSGCHHHVRAGAAAAAHGSVRTSRQSRNNAPPMAPTIRGADRSSEGE 599
Query: 227 QR 232
+R
Sbjct: 600 RR 601
>05_03_0069 +
8004235-8004350,8004927-8005215,8005314-8005375,
8005516-8005602,8005667-8005723,8005940-8006004,
8006292-8006320
Length = 234
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +3
Query: 60 PPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPT 239
PPP + NP+T I + + P P + +K T +++ST AI S E T
Sbjct: 146 PPPAPHTDNPSTTIHNTGASSKSTP---PEISLADKTPTEKTSSTRKRAIDFTKDSIEET 202
>05_01_0251 +
1901709-1901864,1901968-1901999,1902534-1902664,
1902740-1902821,1902928-1903054,1903369-1903686,
1903785-1903846,1903988-1904074,1904139-1904195,
1906113-1906197,1906916-1907185,1908158-1908254,
1908390-1908436,1908826-1908939,1909024-1909117,
1909360-1909457,1910356-1910455,1911445-1911521,
1911824-1913122
Length = 1110
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +3
Query: 60 PPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPT 239
PPP + NP+T I + + P P + +K T +++ST AI S E T
Sbjct: 293 PPPAPHTDNPSTTIHNTGASSKSTP---PEISLADKTPTEKTSSTTKRAIDFTKDSIEET 349
>04_04_1393 -
33204699-33204806,33204927-33205164,33205581-33205825,
33206229-33206339,33206645-33206743,33207684-33207731,
33207882-33207999,33208085-33208115,33208700-33208806,
33209644-33209725,33210010-33210104,33210579-33210664,
33211074-33211195,33211613-33211824,33212362-33212510,
33212755-33212982
Length = 692
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 291 KIIRYYRCNDMSELSPLMIHFINTIRDM 374
KII Y+ N+++++S L HFI+ + D+
Sbjct: 599 KIIESYKSNNVNQVSNLCQHFIDLVNDL 626
>03_05_0898 +
28610123-28610203,28611190-28611271,28611666-28611721,
28612253-28612366,28612484-28612546,28612633-28612752,
28612850-28612950,28613097-28613156,28613243-28613342,
28613421-28613575,28613661-28613756,28614269-28614403,
28614510-28614573,28614648-28614729,28615038-28615213,
28615302-28615378,28615637-28615769,28615939-28616055,
28616394-28616398,28616564-28616684,28616711-28617751
Length = 992
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 3 RVQIKSMTDERGNFYYNTPPPP---LRYPSNPATAIFTNAQTYNNAPG 137
+V I+S+ RG FY+N P L + P T +F + + PG
Sbjct: 821 KVPIRSIAACRGKFYFNATPESVGVLEFTPTPTTPVFGSIAIADPLPG 868
>02_04_0005 -
18843061-18843201,18843309-18843440,18844457-18845315,
18845884-18845973,18846748-18846869,18846950-18847049,
18847151-18847205,18847275-18847365,18847453-18847572,
18847681-18847780,18847890-18848018,18848099-18848201,
18848670-18848743,18848848-18848933,18849297-18849358,
18849454-18849541,18849937-18850029
Length = 814
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 33 RGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTS 179
+G+ Y PPPP P A+F + Y PPT R+ ++ S
Sbjct: 665 KGSTCYPPPPPPSSTPPVEPVAVFPPPPSPACGVYYPPPTVREPVINRS 713
>12_01_1068 -
11052769-11052943,11053103-11053182,11053304-11053401,
11053487-11053627,11053701-11053841,11053933-11054017,
11055296-11055826,11055926-11055940
Length = 421
Score = 28.3 bits (60), Expect = 2.4
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 YNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPY--N 221
++ PPP Y + A ++++ +Y PP D + +S S +VA AP
Sbjct: 77 WDPPPPSSPYSAGHAADEYSSSSSYRRRGASAPP-AEDVVVSSSYSRPAAAVASAPQACT 135
Query: 222 KSKEPTLDAGES 257
S P L A E+
Sbjct: 136 VSSAPPLRAVET 147
>03_02_0594 -
9695616-9696042,9696646-9697260,9697410-9697717,
9700145-9700235,9700698-9700759,9701256-9702962,
9703789-9703870,9703972-9704057,9704855-9704968,
9705113-9705163,9705261-9705358,9707084-9707546
Length = 1367
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 261 WYNKCVDFVQKIIRYYRCNDMSELSP 338
WY +C+D Q+ +R RC+D + P
Sbjct: 473 WYRECLDLFQEFVR-VRCSDGDGVGP 497
>12_01_0035 -
295988-296408,296645-296813,296929-296965,297097-297173,
297391-297631
Length = 314
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 123 NNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTL 242
NN TT + + S+ +++S ++ PY +SK P L
Sbjct: 20 NNDGSSTSSTTEEEESGESQRRTSSSSSVRPYIRSKNPRL 59
>09_04_0151 -
15154063-15154296,15155616-15155660,15155749-15155820,
15155932-15156024,15156282-15156351,15156716-15156912,
15156946-15157215,15158620-15158757,15158841-15158930,
15159041-15159247,15159987-15160154,15160300-15160503,
15160584-15160670,15160748-15160861,15161689-15161835,
15161914-15162063,15162211-15162276,15162376-15162480,
15162625-15162798,15162930-15163154,15163534-15163590,
15163858-15164019,15164234-15164302,15164391-15164471,
15164823-15164925,15165011-15165156,15165285-15165359,
15165441-15165508,15165586-15165667,15165745-15165858,
15166358-15166476,15166692-15166781,15166862-15166988
Length = 1382
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 122 QQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQE 226
QQ+A Y+ QQN Q+Q K+ +++ +QE
Sbjct: 588 QQKASFHEKYEELQQNALVAQEQAKIANEKLSKQE 622
>06_03_0189 - 17697779-17698939
Length = 386
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 57 PPPPLRYPSNPATAIFTNAQTYNNAPGYVPPT 152
PPPPL ++ + A A T + +PG P T
Sbjct: 293 PPPPLPSAADKSPATAAEAATASQSPGLSPTT 324
>04_01_0589 + 7704262-7704429,7704718-7705540,7705844-7706484
Length = 543
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 158 RQQNGHEPQQQHKLGSDRTVQQEQRTDARRRRIYLVQQMCGFCSKNY*ILQVQ*HVR 328
RQ +PQ Q +TV++ + R +IYL+QQM C + + Q Q V+
Sbjct: 86 RQPLKDQPQPQVMANQTQTVEELLQQMRHRYQIYLMQQMQRQCQEPRQVHQPQMQVQ 142
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 27.5 bits (58), Expect = 4.1
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +2
Query: 98 HIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRRIYLVQQMC 277
H H L V A + + QQQH ++ Q Q+ +R++ LVQQ C
Sbjct: 159 HHHHHQLLFSPPPVMAHHQELAALQEQQQQQHHQDVMQSPHQHQQQQQQRQQ--LVQQNC 216
Query: 278 GFCSK 292
G+ K
Sbjct: 217 GYAVK 221
>12_01_0741 + 6649988-6653065
Length = 1025
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 18 SMTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRD-----NKMDTSR 182
S+T + N +++ P PL + + + N+ GY+PPT D +D S
Sbjct: 601 SVTLDYSNNRFSSMPMPLNFSTYLMNTVIFKVSR-NSLSGYIPPTICDAIKSLQIIDLSY 659
Query: 183 SNSTNSV 203
+N T S+
Sbjct: 660 NNLTGSI 666
>05_02_0119 +
6793292-6793613,6795793-6795952,6796416-6796458,
6797015-6797335
Length = 281
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 92 NGHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARR 247
+G H+R ++ R + A D R+ +G E G +RT+ D+RR
Sbjct: 49 SGGWHRRTSMIVREELEVAGDGRRASGVEAPGGSGPGGERTMAPANIDDSRR 100
>03_05_0781 +
27654764-27655429,27655902-27656004,27656535-27656590,
27656895-27657059,27657078-27657083,27657657-27657770,
27658170-27658262
Length = 400
Score = 27.1 bits (57), Expect = 5.5
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = +3
Query: 33 RGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIA 212
RG + PPPP +PS A+ V P R + DT+R S + A+
Sbjct: 28 RGGIFLLKPPPPPPFPSRRGVAV------------AVAPPLRASHPDTARRVSVSPAAVE 75
Query: 213 PYNKSKEPTLDA 248
P K + LDA
Sbjct: 76 PPPKPR-ALLDA 86
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = +3
Query: 42 FYYNTPPP-PLRYPSNP 89
F YN+PPP P +YPS P
Sbjct: 184 FPYNSPPPSPYQYPSPP 200
>01_06_1263 +
35840502-35841308,35841763-35841969,35842272-35842370,
35843361-35843464,35844521-35844698,35844774-35845244,
35845383-35845523,35846290-35846349,35846427-35846490,
35847295-35847524,35847606-35847704
Length = 819
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +3
Query: 42 FYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAP 215
+YY+ P P+ +++ ++A T + + GYV P+T+ T+ + + A+ P
Sbjct: 211 YYYDQSAPSSGGPAVAVSSV-SDANTASVSSGYVYPSTQPPPPGTTWRSDAGATAVPP 267
>01_01_0016 - 88825-90411
Length = 528
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 27 DERGNFYYNTPPPPLRYPSNPA 92
DE G FY + PPP + PS A
Sbjct: 311 DEHGGFYDHVPPPNVGVPSPDA 332
>12_02_0998 +
25126114-25126596,25129213-25129339,25129349-25129459,
25130122-25130270,25130356-25130643,25130753-25130941,
25131445-25131619,25132219-25132316
Length = 539
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = +3
Query: 57 PPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDN---KMDTSRSNSTNSVAIAPYNKS 227
PPPP +PSN + Y P ++PP +D+ D I+ Y +
Sbjct: 310 PPPPWGHPSN----VPPGGPGYGGNPQFMPPRPQDHYYPPPDVPPVEKQPHYGISSYGRD 365
Query: 228 KEPT 239
PT
Sbjct: 366 APPT 369
>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
Length = 627
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 42 FYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPP 149
F+ PPPP +YP +P Q A G PP
Sbjct: 15 FHPQAPPPPPQYPHHPPPYAAPLPQYAPYARGMPPP 50
>05_04_0295 + 19940822-19940906,19940976-19941902,19941956-19942866
Length = 640
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 87 PATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTLDAGESIWY 266
PA A+F + ++ GY P K + S V +A + K KEP D +++
Sbjct: 237 PAIAMFVSVLSF--VVGY--PLYVKVKPEGSPFKRLVQVVVAAFKKIKEPVPDDAGELYH 292
Query: 267 NKCVD 281
NK +D
Sbjct: 293 NKELD 297
>01_06_0046 + 25943183-25943590
Length = 135
Score = 26.6 bits (56), Expect = 7.2
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 42 FYYNTPPPPLRYPSN 86
+YY +PPPP YP +
Sbjct: 61 YYYYSPPPPAYYPGS 75
>11_01_0037 -
280749-281196,281418-281568,281684-281720,281831-281907,
282130-282382
Length = 321
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 150 TTRDNKMDTSRSNSTNSVAIAPYNKSKEPTL 242
TT + SR +++S ++ PY +SK P L
Sbjct: 33 TTEEEGSGESRRRTSSSSSVRPYVRSKNPRL 63
>09_01_0112 +
1737438-1737777,1738441-1738511,1738974-1739052,
1741559-1741641,1741733-1741784,1742038-1742105,
1742279-1742345,1742426-1742505,1742576-1742640,
1742785-1742847,1743271-1743427,1743511-1743588,
1743677-1744219,1744321-1744497,1744534-1744788,
1745270-1745329,1745874-1745888,1746123-1746135,
1746819-1746934
Length = 793
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = +2
Query: 119 LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRRIYLVQQMCG 280
LQQ+A ++++Y + QQ ++ QQQ +L +QQ+Q+++ ++ V + G
Sbjct: 535 LQQQAALQSSYQSSQQAIYQLQQQLQL-----MQQQQQSNLNHQQPTQVAEQHG 583
>05_06_0159 +
26069833-26069955,26070382-26070516,26070919-26070981,
26071732-26071794,26071949-26072020,26072095-26072238,
26072583-26072797,26073016-26073145
Length = 314
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 101 IHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRT 214
IH++ L QR + RQ++ QQ+ KL +T
Sbjct: 81 IHEQRKLYQRQEEEVVKEVRQEDDDAKQQEEKLKEYQT 118
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 26.2 bits (55), Expect = 9.6
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +3
Query: 57 PPPPL--RYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSN 188
PPPPL P PA+ T A P PP T K +S +N
Sbjct: 91 PPPPLLPTPPPPPASISPTPAPPLPPPPAPAPPPTPTPKFPSSSAN 136
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 57 PPPPLRYPSNPATAIFTNAQTYNNAPGYVPP 149
P PP P++PA +T+ Q Y AP PP
Sbjct: 399 PAPPTYPPADPAAGGYTS-QPYMGAPPPPPP 428
>03_05_0696 -
26856413-26856416,26857917-26858524,26859041-26859101,
26859181-26859557,26860314-26861156
Length = 630
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 159 DNKMDTSRSNSTNSVAIAPYNKSKEPTLDAGESIW 263
DN+M +S ++ ++ + Y K+ + LD S+W
Sbjct: 180 DNRMKNMQSEASQAIRNSKYLKAAQELLDEVVSVW 214
>02_02_0378 + 9561775-9562947
Length = 390
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -2
Query: 147 AARTLARCCKFARW*I--WPLPD*RDTSAAAEGCC 49
A R L R F W + WP PD D +AAA G C
Sbjct: 38 ALRYLPRRPSFLPWLLAPWPTPD--DDTAAAGGAC 70
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 36 GNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTS 179
G YYN P + S P TA +A +YN++ PP D+S
Sbjct: 456 GYDYYNQQQQPQQQQSAPGTAAPGDATSYNSSQ---PPAYASQGYDSS 500
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 57 PPPPLRYPSNP--ATAIFTNAQTYNNAPGYVPPT 152
P PP ++P + AI ++QT+ A YVPP+
Sbjct: 51 PTPPQSSSASPPHSAAIVVSSQTHAAAAKYVPPS 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,419,870
Number of Sequences: 37544
Number of extensions: 178229
Number of successful extensions: 979
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -