Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27f08
(397 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein prot... 36 0.049
U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein prot... 36 0.049
AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein ... 36 0.049
L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 35 0.11
AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein. 35 0.11
AM156947-1|CAJ42307.1| 1221|Homo sapiens centrosome and spindle ... 31 1.4
AJ583433-1|CAE47426.1| 876|Homo sapiens centrosome spindle pole... 31 1.4
Y08267-1|CAA69593.1| 238|Homo sapiens AAD10 protein. 31 1.8
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 31 1.8
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 31 1.8
AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or mix... 31 1.8
U80756-1|AAB91448.1| 169|Homo sapiens polyglutamine rich protei... 30 2.4
BC146765-1|AAI46766.1| 1531|Homo sapiens nuclear factor of activ... 30 2.4
BC131509-1|AAI31510.1| 1548|Homo sapiens NFAT5 protein protein. 30 2.4
BC017234-1|AAH17234.1| 517|Homo sapiens MBD2-interacting zinc f... 30 2.4
BC012856-1|AAH12856.1| 517|Homo sapiens MBD2-interacting zinc f... 30 2.4
BC001945-1|AAH01945.1| 517|Homo sapiens MBD2-interacting zinc f... 30 2.4
BC001073-1|AAH01073.1| 517|Homo sapiens MBD2-interacting zinc f... 30 2.4
AB020634-1|BAA74850.2| 1608|Homo sapiens KIAA0827 protein protein. 30 2.4
L19711-1|AAA81779.1| 895|Homo sapiens dystroglycan protein. 29 4.2
BC014616-1|AAH14616.1| 895|Homo sapiens dystroglycan 1 (dystrop... 29 5.6
BC012740-1|AAH12740.1| 895|Homo sapiens dystroglycan 1 (dystrop... 29 5.6
AJ277365-1|CAC10539.1| 796|Homo sapiens polyglutamine-containin... 29 5.6
AB058768-1|BAB47494.1| 723|Homo sapiens KIAA1865 protein protein. 29 5.6
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 29 7.4
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 29 7.4
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 29 7.4
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 28 9.7
X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4... 28 9.7
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 28 9.7
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 28 9.7
D83785-1|BAA12114.2| 1042|Homo sapiens KIAA0200 protein. 28 9.7
DQ650705-1|ABG25916.1| 372|Homo sapiens T-box 1 protein. 28 9.7
BC108907-1|AAI08908.2| 917|Homo sapiens TJP3 protein protein. 28 9.7
BC108906-1|AAI08907.1| 938|Homo sapiens TJP3 protein protein. 28 9.7
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 28 9.7
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 28 9.7
BC018706-1|AAH18706.1| 480|Homo sapiens TNS4 protein protein. 28 9.7
AK027856-1|BAB55413.1| 480|Homo sapiens protein ( Homo sapiens ... 28 9.7
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 28 9.7
AF417488-1|AAN32666.1| 715|Homo sapiens C-terminal tensin-like ... 28 9.7
AF373867-1|AAK58955.1| 495|Homo sapiens T-box 1 transcription f... 28 9.7
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 28 9.7
AF221759-1|AAF34658.1| 893|Homo sapiens Mam1 protein. 28 9.7
AF012131-1|AAB94019.1| 372|Homo sapiens brachyury protein. 28 9.7
AF012130-1|AAB94018.1| 398|Homo sapiens brachyury protein. 28 9.7
>U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein protein.
Length = 2442
Score = 35.9 bits (79), Expect = 0.049
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +3
Query: 54 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 233
TPP P P+ P+T + ++ QT PG VP T+ T ++ + V P +
Sbjct: 878 TPPQPAA-PTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQP 936
Query: 234 PTLDAGES 257
P++ +S
Sbjct: 937 PSVATPQS 944
>U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein protein.
Length = 2442
Score = 35.9 bits (79), Expect = 0.049
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +3
Query: 54 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 233
TPP P P+ P+T + ++ QT PG VP T+ T ++ + V P +
Sbjct: 878 TPPQPAA-PTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQP 936
Query: 234 PTLDAGES 257
P++ +S
Sbjct: 937 PSVATPQS 944
>AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein
protein.
Length = 2472
Score = 35.9 bits (79), Expect = 0.049
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +3
Query: 54 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 233
TPP P P+ P+T + ++ QT PG VP T+ T ++ + V P +
Sbjct: 908 TPPQPAA-PTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQP 966
Query: 234 PTLDAGES 257
P++ +S
Sbjct: 967 PSVATPQS 974
>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
Length = 1898
Score = 34.7 bits (76), Expect = 0.11
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +2
Query: 65 AAEVSL*SGNGHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDAR 244
A E L S GH + +++ R R + R++ E QQQ + DR Q+E+ + R
Sbjct: 188 AEEEQLQSCKGHETEEFPDEEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWR 247
Query: 245 RRRIYL 262
+R L
Sbjct: 248 KRETVL 253
>AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.
Length = 1943
Score = 34.7 bits (76), Expect = 0.11
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +2
Query: 65 AAEVSL*SGNGHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDAR 244
A E L S GH + +++ R R + R++ E QQQ + DR Q+E+ + R
Sbjct: 188 AEEEQLQSCKGHETEEFPDEEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWR 247
Query: 245 RRRIYL 262
+R L
Sbjct: 248 KRETVL 253
>AM156947-1|CAJ42307.1| 1221|Homo sapiens centrosome and spindle
pole associated protein 1 protein.
Length = 1221
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/51 (23%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +2
Query: 107 QRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQ--QEQRTDARRRR 253
+R +QRAR++ Y+ Q+ E +++ +L ++ ++ +E++ +A R++
Sbjct: 765 ERRLAEQRARIQQEYEEEQEKKREKEEEQRLKNEEHIRLAEERQKEAERKK 815
>AJ583433-1|CAE47426.1| 876|Homo sapiens centrosome spindle pole
associated protein protein.
Length = 876
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/51 (23%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +2
Query: 107 QRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQ--QEQRTDARRRR 253
+R +QRAR++ Y+ Q+ E +++ +L ++ ++ +E++ +A R++
Sbjct: 420 ERRLAEQRARIQQEYEEEQEKKREKEEEQRLKNEEHIRLAEERQKEAERKK 470
>Y08267-1|CAA69593.1| 238|Homo sapiens AAD10 protein.
Length = 238
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 107 QRANLQ-QRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQR 232
Q LQ Q+ R++ A +QQ + QQQH LG QQ+Q+
Sbjct: 28 QERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQQ 70
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 107 QRANLQ-QRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQR 232
Q LQ Q+ R++ A +QQ + QQQH LG QQ+Q+
Sbjct: 3137 QERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQQ 3179
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +2
Query: 119 LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRRIYLVQQ 271
LQQ+ +++ +QQ + QQQ +L + QQ+Q+ ++++ +QQ
Sbjct: 3320 LQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQ 3370
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 107 QRANLQ-QRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQR 232
Q LQ Q+ R++ A +QQ + QQQH LG QQ+Q+
Sbjct: 3442 QERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQQ 3484
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +2
Query: 119 LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRRIYLVQQ 271
LQQ+ +++ +QQ + QQQ +L + QQ+Q+ ++++ +QQ
Sbjct: 3625 LQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQ 3675
>AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia 2 variant protein.
Length = 2704
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 107 QRANLQ-QRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQR 232
Q LQ Q+ R++ A +QQ + QQQH LG QQ+Q+
Sbjct: 884 QERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQQ 926
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +2
Query: 119 LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRRIYLVQQ 271
LQQ+ +++ +QQ + QQQ +L + QQ+Q+ ++++ +QQ
Sbjct: 1067 LQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQ 1117
>U80756-1|AAB91448.1| 169|Homo sapiens polyglutamine rich protein
protein.
Length = 169
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 107 QRANLQ-QRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQ 229
Q LQ Q+ R++ A +QQ + QQQH LG QQ+Q
Sbjct: 44 QERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQ 85
>BC146765-1|AAI46766.1| 1531|Homo sapiens nuclear factor of
activated T-cells 5, tonicity-responsive protein.
Length = 1531
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +3
Query: 48 YNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKS 227
Y+ P L+ P + T++ + +QT G PP ++ S+S+ A + + S
Sbjct: 28 YDLLPKELQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTS 87
Query: 228 KEPTL 242
PT+
Sbjct: 88 SSPTI 92
>BC131509-1|AAI31510.1| 1548|Homo sapiens NFAT5 protein protein.
Length = 1548
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +3
Query: 48 YNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKS 227
Y+ P L+ P + T++ + +QT G PP ++ S+S+ A + + S
Sbjct: 46 YDLLPKELQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTS 105
Query: 228 KEPTL 242
PT+
Sbjct: 106 SSPTI 110
>BC017234-1|AAH17234.1| 517|Homo sapiens MBD2-interacting zinc
finger protein.
Length = 517
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 185 QQHKLGSDRTVQQEQRTDARRRRIYLVQQMCGFCS 289
QQH GS ++E+ D + Q CGFCS
Sbjct: 41 QQHLHGSGEEEEEEEEDDPLEEEFSCLWQECGFCS 75
>BC012856-1|AAH12856.1| 517|Homo sapiens MBD2-interacting zinc
finger protein.
Length = 517
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 185 QQHKLGSDRTVQQEQRTDARRRRIYLVQQMCGFCS 289
QQH GS ++E+ D + Q CGFCS
Sbjct: 41 QQHLHGSGEEEEEEEEDDPLEEEFSCLWQECGFCS 75
>BC001945-1|AAH01945.1| 517|Homo sapiens MBD2-interacting zinc
finger protein.
Length = 517
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 185 QQHKLGSDRTVQQEQRTDARRRRIYLVQQMCGFCS 289
QQH GS ++E+ D + Q CGFCS
Sbjct: 41 QQHLHGSGEEEEEEEEDDPLEEEFSCLWQECGFCS 75
>BC001073-1|AAH01073.1| 517|Homo sapiens MBD2-interacting zinc
finger protein.
Length = 517
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 185 QQHKLGSDRTVQQEQRTDARRRRIYLVQQMCGFCS 289
QQH GS ++E+ D + Q CGFCS
Sbjct: 41 QQHLHGSGEEEEEEEEDDPLEEEFSCLWQECGFCS 75
>AB020634-1|BAA74850.2| 1608|Homo sapiens KIAA0827 protein protein.
Length = 1608
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +3
Query: 48 YNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKS 227
Y+ P L+ P + T++ + +QT G PP ++ S+S+ A + + S
Sbjct: 105 YDLLPKELQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTS 164
Query: 228 KEPTL 242
PT+
Sbjct: 165 SSPTI 169
>L19711-1|AAA81779.1| 895|Homo sapiens dystroglycan protein.
Length = 895
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 21 MTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPP 149
+ DE N PPPP P + N Y + P YVPP
Sbjct: 853 LRDEDPNAPPYQPPPPFTVPMEGKGSRPKNMTPYRSPPPYVPP 895
>BC014616-1|AAH14616.1| 895|Homo sapiens dystroglycan 1
(dystrophin-associated glycoprotein 1) protein.
Length = 895
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 21 MTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPP 149
+ DE N PPPP P + N Y + P YVPP
Sbjct: 853 LRDEDPNAPPYQPPPPFTAPMEGKGSRPKNMTPYRSPPPYVPP 895
>BC012740-1|AAH12740.1| 895|Homo sapiens dystroglycan 1
(dystrophin-associated glycoprotein 1) protein.
Length = 895
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 21 MTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPP 149
+ DE N PPPP P + N Y + P YVPP
Sbjct: 853 LRDEDPNAPPYQPPPPFTAPMEGKGSRPKNMTPYRSPPPYVPP 895
>AJ277365-1|CAC10539.1| 796|Homo sapiens polyglutamine-containing
protein protein.
Length = 796
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 27 DERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVA 206
++R F Y PPPP+ S+ TA N N G+ PT + + +R + +S A
Sbjct: 166 EQRSRFEY--PPPPVSLGSSSHTARLPNGLGGPN--GFPKPTPEEGPPELNRQSPNSSSA 221
Query: 207 IA 212
A
Sbjct: 222 AA 223
>AB058768-1|BAB47494.1| 723|Homo sapiens KIAA1865 protein protein.
Length = 723
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 27 DERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVA 206
++R F Y PPPP+ S+ TA N N G+ PT + + +R + +S A
Sbjct: 93 EQRSRFEY--PPPPVSLGSSSHTARLPNGLGGPN--GFPKPTPEEGPPELNRQSPNSSSA 148
Query: 207 IA 212
A
Sbjct: 149 AA 150
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 28.7 bits (61), Expect = 7.4
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +3
Query: 54 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSR-SNSTNSVAIAPYNKSK 230
T P P PS+P T T + T +P PPTT T+ S T ++ P +
Sbjct: 1072 TTPSPTTTPSSPITTTTTPSSTTTPSP---PPTTMTTPSPTTTPSPPTTTMTTLPPTTTS 1128
Query: 231 EP 236
P
Sbjct: 1129 SP 1130
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 28.7 bits (61), Expect = 7.4
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +3
Query: 54 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSR-SNSTNSVAIAPYNKSK 230
T P P PS+P T T + T +P PPTT T+ S T ++ P +
Sbjct: 355 TTPSPTTTPSSPITTTTTPSSTTTPSP---PPTTMTTPSPTTTPSPPTTTMTTLPPTTTS 411
Query: 231 EP 236
P
Sbjct: 412 SP 413
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 28.7 bits (61), Expect = 7.4
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +3
Query: 54 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSR-SNSTNSVAIAPYNKSK 230
T P P PS+P T T + T +P PPTT T+ S T ++ P +
Sbjct: 1697 TTPSPTTTPSSPITTTTTPSSTTTPSP---PPTTMTTPSPTTTPSPPTTTMTTLPPTTTS 1753
Query: 231 EP 236
P
Sbjct: 1754 SP 1755
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 389 VRVDAHVTNSVYKMN-HERTKF*HVIAPVISNNFLNKIHTFVVPNR 255
V V + SV +N H R+ H +AP + FL+K+ TF+ R
Sbjct: 304 VLVTFSIVTSVCVLNVHHRSPSTHTMAPWVKRCFLHKLPTFLFMKR 349
>X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4
subunit protein.
Length = 451
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 389 VRVDAHVTNSVYKMN-HERTKF*HVIAPVISNNFLNKIHTFVVPNR 255
V V + SV +N H R+ H +AP + FL+K+ TF+ R
Sbjct: 257 VLVTFSIVTSVCVLNVHHRSPSTHTMAPWVKRCFLHKLPTFLFMKR 302
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 389 VRVDAHVTNSVYKMN-HERTKF*HVIAPVISNNFLNKIHTFVVPNR 255
V V + SV +N H R+ H +AP + FL+K+ TF+ R
Sbjct: 304 VLVTFSIVTSVCVLNVHHRSPSTHTMAPWVKRCFLHKLPTFLFMKR 349
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 389 VRVDAHVTNSVYKMN-HERTKF*HVIAPVISNNFLNKIHTFVVPNR 255
V V + SV +N H R+ H +AP + FL+K+ TF+ R
Sbjct: 304 VLVTFSIVTSVCVLNVHHRSPSTHTMAPWVKRCFLHKLPTFLFMKR 349
>D83785-1|BAA12114.2| 1042|Homo sapiens KIAA0200 protein.
Length = 1042
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 86 SGNGHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGS 205
+G+ HI ++ N+ Q V AAY QQH G+
Sbjct: 802 NGHAHIPRQTNVGQNTSVSAAYGQNSLGSSGLSQQHNKGT 841
>DQ650705-1|ABG25916.1| 372|Homo sapiens T-box 1 protein.
Length = 372
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 57 PPPPLRYPSNPATAIFTNAQTYNNAPG 137
PPPP YP PA T+A PG
Sbjct: 64 PPPPHAYPFAPAAGAATSAAAEPEGPG 90
>BC108907-1|AAI08908.2| 917|Homo sapiens TJP3 protein protein.
Length = 917
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 30 ERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNA-PGYVPPTTRDNKMDTSRSNSTNSV 203
+RG F N PP S+P I A + A P ++PP R + S + + V
Sbjct: 271 DRGQFLVNIPPAVSDSDSSPLEDISDLASELSQAPPSHIPPPPRHAQRSPEASQTDSPV 329
>BC108906-1|AAI08907.1| 938|Homo sapiens TJP3 protein protein.
Length = 938
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 30 ERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNA-PGYVPPTTRDNKMDTSRSNSTNSV 203
+RG F N PP S+P I A + A P ++PP R + S + + V
Sbjct: 290 DRGQFLVNIPPAVSDSDSSPLEDISDLASELSQAPPSHIPPPPRHAQRSPEASQTDSPV 348
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 389 VRVDAHVTNSVYKMN-HERTKF*HVIAPVISNNFLNKIHTFVVPNR 255
V V + SV +N H R+ H +AP + FL+K+ TF+ R
Sbjct: 304 VLVTFSIVTSVCVLNVHHRSPSTHTMAPWVKRCFLHKLPTFLFMKR 349
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 389 VRVDAHVTNSVYKMN-HERTKF*HVIAPVISNNFLNKIHTFVVPNR 255
V V + SV +N H R+ H +AP + FL+K+ TF+ R
Sbjct: 304 VLVTFSIVTSVCVLNVHHRSPSTHTMAPWVKRCFLHKLPTFLFMKR 349
>BC018706-1|AAH18706.1| 480|Homo sapiens TNS4 protein protein.
Length = 480
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 18 SMTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAP 134
S +R + N+ P PSNP A +N+QT ++AP
Sbjct: 150 SSPPQRTPGHQNSVQPGAASPSNPCPATRSNSQTLSDAP 188
>AK027856-1|BAB55413.1| 480|Homo sapiens protein ( Homo sapiens
cDNA FLJ14950 fis, clone PLACE2000371, weakly similar to
TENSIN. ).
Length = 480
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 18 SMTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAP 134
S +R + N+ P PSNP A +N+QT ++AP
Sbjct: 150 SSPPQRTPGHQNSVQPGAASPSNPCPATRSNSQTLSDAP 188
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 389 VRVDAHVTNSVYKMN-HERTKF*HVIAPVISNNFLNKIHTFVVPNR 255
V V + SV +N H R+ H +AP + FL+K+ TF+ R
Sbjct: 303 VLVTFSIVTSVCVLNVHHRSPSTHTMAPWVKRCFLHKLPTFLFMKR 348
>AF417488-1|AAN32666.1| 715|Homo sapiens C-terminal tensin-like
protein protein.
Length = 715
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 18 SMTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAP 134
S +R + N+ P PSNP A +N+QT ++AP
Sbjct: 385 SSPPQRTPGHQNSVQPGAASPSNPCPATRSNSQTLSDAP 423
>AF373867-1|AAK58955.1| 495|Homo sapiens T-box 1 transcription
factor C protein.
Length = 495
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 57 PPPPLRYPSNPATAIFTNAQTYNNAPG 137
PPPP YP PA T+A PG
Sbjct: 64 PPPPHAYPFAPAAGAATSAAAEPEGPG 90
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 389 VRVDAHVTNSVYKMN-HERTKF*HVIAPVISNNFLNKIHTFVVPNR 255
V V + SV +N H R+ H +AP + FL+K+ TF+ R
Sbjct: 304 VLVTFSIVTSVCVLNVHHRSPSTHTMAPWVKRCFLHKLPTFLFMKR 349
>AF221759-1|AAF34658.1| 893|Homo sapiens Mam1 protein.
Length = 893
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 86 SGNGHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGS 205
+G+ HI ++ N+ Q V AAY QQH G+
Sbjct: 653 NGHAHIPRQTNVGQNTSVSAAYGQNSLGSSGLSQQHNKGT 692
>AF012131-1|AAB94019.1| 372|Homo sapiens brachyury protein.
Length = 372
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 57 PPPPLRYPSNPATAIFTNAQTYNNAPG 137
PPPP YP PA T+A PG
Sbjct: 64 PPPPHAYPFAPAAGAATSAAAEPEGPG 90
>AF012130-1|AAB94018.1| 398|Homo sapiens brachyury protein.
Length = 398
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 57 PPPPLRYPSNPATAIFTNAQTYNNAPG 137
PPPP YP PA T+A PG
Sbjct: 64 PPPPHAYPFAPAAGAATSAAAEPEGPG 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,104,420
Number of Sequences: 237096
Number of extensions: 926088
Number of successful extensions: 4722
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 3277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4058
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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