Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27f08
(397 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024790-4|AAF60636.1| 121|Caenorhabditis elegans Hypothetical ... 37 0.006
AC024790-5|AAF60640.2| 119|Caenorhabditis elegans Hypothetical ... 36 0.014
AC024853-4|AAK68586.1| 746|Caenorhabditis elegans Hypothetical ... 31 0.23
Z83217-2|CAB05680.2| 319|Caenorhabditis elegans Hypothetical pr... 31 0.40
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 30 0.52
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 30 0.52
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 30 0.69
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 29 1.2
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 29 1.6
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 29 1.6
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 1.6
AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical... 29 1.6
Z70034-10|CAI79119.2| 560|Caenorhabditis elegans Hypothetical p... 28 2.1
Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical pr... 28 2.1
U56860-5|AAP40524.1| 685|Caenorhabditis elegans Intermediate fi... 28 2.1
U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate fi... 28 2.1
U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate fi... 28 2.1
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 28 2.1
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 28 2.1
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 28 2.1
Z81056-1|CAB02902.1| 319|Caenorhabditis elegans Hypothetical pr... 28 2.8
U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical pr... 28 2.8
U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical pr... 28 2.8
U56964-7|AAB54034.1| 382|Caenorhabditis elegans Hypothetical pr... 28 2.8
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 28 2.8
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 27 3.7
X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein ... 27 3.7
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 27 3.7
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 27 3.7
Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z69885-5|CAA93756.2| 882|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z68108-15|CAJ58502.1| 582|Caenorhabditis elegans Hypothetical p... 27 4.9
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 27 4.9
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 27 4.9
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 27 4.9
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 27 4.9
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 27 4.9
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical pr... 27 4.9
U97593-7|AAB52878.1| 591|Caenorhabditis elegans Prion-like-(q/n... 27 4.9
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 27 4.9
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 27 4.9
AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B... 27 4.9
AY064464-1|AAL40874.1| 882|Caenorhabditis elegans minibrain kin... 27 4.9
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 27 4.9
AF104859-1|AAC79091.1| 93|Caenorhabditis elegans putative RNA-... 27 4.9
AF063007-5|AAD47125.1| 712|Caenorhabditis elegans Prion-like-(q... 27 4.9
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical p... 27 6.4
Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z48241-4|CAA88284.1| 468|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z48241-3|CAC42265.1| 490|Caenorhabditis elegans Hypothetical pr... 27 6.4
U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical pr... 27 6.4
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 27 6.4
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 27 6.4
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 27 6.4
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 27 6.4
AF241847-1|AAF71523.1| 468|Caenorhabditis elegans LAG-3B protein. 27 6.4
AF241846-1|AAF71522.1| 490|Caenorhabditis elegans LAG-3A protein. 27 6.4
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 27 6.4
Z22174-1|CAA80128.1| 732|Caenorhabditis elegans Hypothetical pr... 26 8.5
U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying defe... 26 8.5
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 26 8.5
U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical pr... 26 8.5
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 26 8.5
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 26 8.5
AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical ... 26 8.5
AL023493-2|CAD44137.1| 909|Caenorhabditis elegans Hypothetical ... 26 8.5
AL023493-1|CAA18898.1| 947|Caenorhabditis elegans Hypothetical ... 26 8.5
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 26 8.5
>AC024790-4|AAF60636.1| 121|Caenorhabditis elegans Hypothetical
protein Y47D7A.7 protein.
Length = 121
Score = 36.7 bits (81), Expect = 0.006
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Frame = +3
Query: 39 NFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGY--VPP------TTRDNKMDTSRSNST 194
N Y TP P PS P + A TY + P Y PP T+ DN+ DT ++T
Sbjct: 24 NSYPTTPSYPTPPPSYPTPKKYPVAPTYPSTPSYSAQPPPAPSAYTSSDNQEDTESESAT 83
Query: 195 NSVAIAPYNK 224
++ A + Y K
Sbjct: 84 SASATSEYRK 93
>AC024790-5|AAF60640.2| 119|Caenorhabditis elegans Hypothetical
protein Y47D7A.2 protein.
Length = 119
Score = 35.5 bits (78), Expect = 0.014
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Frame = +3
Query: 39 NFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGY-VPP-----TTRDNKMDTSRSNSTNS 200
N Y TP P PS P + A TY + P Y PP ++ DN+ DT + T +
Sbjct: 24 NSYPTTPSYPTPPPSYPTPKKYPVAPTYPSTPSYSAPPAQSAYSSSDNQEDTESESVTGA 83
Query: 201 VAIAPYNK 224
+ + Y K
Sbjct: 84 ASTSEYRK 91
>AC024853-4|AAK68586.1| 746|Caenorhabditis elegans Hypothetical
protein Y71F9AR.3 protein.
Length = 746
Score = 31.5 bits (68), Expect = 0.23
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 9 QIKSMTDERGNFYYNTPP--PPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSR 182
Q + + +F+ N P P R S P+++ F+N+ N PPTT D +TSR
Sbjct: 174 QAYDIVNHDADFFANELPSTPSEREASPPSSSQFSNSAAPNLPETKQPPTTTDQYSETSR 233
Query: 183 S 185
+
Sbjct: 234 T 234
>Z83217-2|CAB05680.2| 319|Caenorhabditis elegans Hypothetical
protein C10C6.3 protein.
Length = 319
Score = 30.7 bits (66), Expect = 0.40
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 105 TNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 233
TN T + GYVPP ++ + N+VA+ P K K+
Sbjct: 151 TNVYT-GSREGYVPPPAKEGSGSGGKKKDMNNVAVKPDEKKKD 192
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 30.3 bits (65), Expect = 0.52
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 51 NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMD 173
++PPP PS A+A+ N + + A +VPPT ++++
Sbjct: 4666 SSPPPSNDQPSTSASAMSPNRPSTSAASSFVPPTFDQDEIE 4706
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 30.3 bits (65), Expect = 0.52
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 51 NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMD 173
++PPP PS A+A+ N + + A +VPPT ++++
Sbjct: 4666 SSPPPSNDQPSTSASAMSPNRPSTSAASSFVPPTFDQDEIE 4706
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 29.9 bits (64), Expect = 0.69
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +2
Query: 98 HIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRRIYLV 265
H + QQ R Y+ R QN + + G DR+ + R D RRR + +
Sbjct: 190 HFVNQMMQQQINRSAPPYNGRHQNSTPHRHHDRHGYDRSSSRHHRNDDRRRSAHFL 245
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = +3
Query: 18 SMTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTN 197
S + R + Y PPP YP+NP Y P Y DN+ + S N
Sbjct: 187 SSPNNRTSLYNPQPPPKTGYPTNPRVPYNPPQPNYTRQPTY----PEDNRAPYKPTRSPN 242
Query: 198 S 200
+
Sbjct: 243 T 243
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 28.7 bits (61), Expect = 1.6
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 42 FYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKM 170
F+ T PP Y + PAT F Q Y P + + N+M
Sbjct: 389 FFQTTRPPMPTYATTPATTQFIPKQIYTTPPQMPKNSIKINQM 431
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 28.7 bits (61), Expect = 1.6
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 42 FYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKM 170
F+ T PP Y + PAT F Q Y P + + N+M
Sbjct: 486 FFQTTRPPMPTYATTPATTQFIPKQIYTTPPQMPKNSIKINQM 528
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 60 PPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRS 185
PPP P + A ++ NAP P TT ++ ++S S
Sbjct: 833 PPPAPQPPSSAASLTPAPSAAQNAPSIAPSTTEASEEESSGS 874
>AC024790-10|AAF60632.2| 129|Caenorhabditis elegans Hypothetical
protein Y47D7A.11 protein.
Length = 129
Score = 28.7 bits (61), Expect = 1.6
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +3
Query: 48 YNTPPPPLRYPSN-PATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVA 206
Y TPPP P P + + Y P Y P + +S S S N VA
Sbjct: 32 YPTPPPSYPTPKKYPVAPTYPSPPAYAQKPSYSAPPPPAPSVYSSSSFSDNEVA 85
>Z70034-10|CAI79119.2| 560|Caenorhabditis elegans Hypothetical
protein C18E9.3c protein.
Length = 560
Score = 28.3 bits (60), Expect = 2.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 95 GHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQ 229
G +H + N Q +++ QQ H+P QQH+ + V +Q
Sbjct: 330 GQLHHQMNAGQLHQIQQQQQQCQQIQHQPPQQHQQVINGQVMNQQ 374
>Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical
protein C18E9.3b protein.
Length = 620
Score = 28.3 bits (60), Expect = 2.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 95 GHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQ 229
G +H + N Q +++ QQ H+P QQH+ + V +Q
Sbjct: 390 GQLHHQMNAGQLHQIQQQQQQCQQIQHQPPQQHQQVINGQVMNQQ 434
>Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical
protein C18E9.3a protein.
Length = 623
Score = 28.3 bits (60), Expect = 2.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 95 GHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQ 229
G +H + N Q +++ QQ H+P QQH+ + V +Q
Sbjct: 393 GQLHHQMNAGQLHQIQQQQQQCQQIQHQPPQQHQQVINGQVMNQQ 437
>U56860-5|AAP40524.1| 685|Caenorhabditis elegans Intermediate
filament, c protein2, isoform c protein.
Length = 685
Score = 28.3 bits (60), Expect = 2.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 158 RQQNGHEPQQQHKLGSDRTVQQEQRTDARRR 250
RQ+ G++ QQQH+ +T +QE++ + +R
Sbjct: 290 RQEQGYQQQQQHRSREYKTHRQEKQENYNQR 320
>U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate
filament, c protein2, isoform a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 2.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 158 RQQNGHEPQQQHKLGSDRTVQQEQRTDARRR 250
RQ+ G++ QQQH+ +T +QE++ + +R
Sbjct: 290 RQEQGYQQQQQHRSREYKTHRQEKQENYNQR 320
>U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate
filament, c protein2, isoform b protein.
Length = 1248
Score = 28.3 bits (60), Expect = 2.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 158 RQQNGHEPQQQHKLGSDRTVQQEQRTDARRR 250
RQ+ G++ QQQH+ +T +QE++ + +R
Sbjct: 290 RQEQGYQQQQQHRSREYKTHRQEKQENYNQR 320
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 102 FTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 233
F N T NN + P DN ++ +NS N+ A A N S+E
Sbjct: 570 FVNQNTQNNFKPFSPNKAADNSRNSWNNNSQNNSA-ASQNISRE 612
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 102 FTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 233
F N T NN + P DN ++ +NS N+ A A N S+E
Sbjct: 473 FVNQNTQNNFKPFSPNKAADNSRNSWNNNSQNNSA-ASQNISRE 515
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 102 FTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 233
F N T NN + P DN ++ +NS N+ A A N S+E
Sbjct: 484 FVNQNTQNNFKPFSPNKAADNSRNSWNNNSQNNSA-ASQNISRE 526
>Z81056-1|CAB02902.1| 319|Caenorhabditis elegans Hypothetical
protein F09F3.1 protein.
Length = 319
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 273 CVDFVQKIIRYYRCNDMSELSPLMIHFINTIRDMCIDTN 389
C + YY M +SPL + +NT+ +C+ N
Sbjct: 80 CATLTFSQVNYYLNRTMGMVSPLWSYILNTLIPICLSCN 118
>U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical
protein F59A3.2b protein.
Length = 687
Score = 27.9 bits (59), Expect = 2.8
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +3
Query: 60 PPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNK--MDTSRSNSTNSVAIAPYNKS-- 227
PPP Y S+P A+F Y P +P T N+ D S + S ++K+
Sbjct: 555 PPPQIY-SSPGQALFNPTNLYPTPPSSLPNTYVPNQESFDESVNRDKKSFIFNNHSKANF 613
Query: 228 KEPTLDA 248
PTL A
Sbjct: 614 SNPTLTA 620
>U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical
protein F59A3.2a protein.
Length = 975
Score = 27.9 bits (59), Expect = 2.8
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +3
Query: 60 PPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNK--MDTSRSNSTNSVAIAPYNKS-- 227
PPP Y S+P A+F Y P +P T N+ D S + S ++K+
Sbjct: 555 PPPQIY-SSPGQALFNPTNLYPTPPSSLPNTYVPNQESFDESVNRDKKSFIFNNHSKANF 613
Query: 228 KEPTLDA 248
PTL A
Sbjct: 614 SNPTLTA 620
>U56964-7|AAB54034.1| 382|Caenorhabditis elegans Hypothetical
protein F52E4.8 protein.
Length = 382
Score = 27.9 bits (59), Expect = 2.8
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 185 QQHKLGSDR--TVQQEQRTDARRRRIYLVQQMCGFCSKNY 298
Q+ +L +R T +EQ+T+ + R CG CS+N+
Sbjct: 51 QKRRLNENRPQTELKEQKTEPKTRSRQFAMLRCGTCSENF 90
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 27.9 bits (59), Expect = 2.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 75 YPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSN 188
+PS +T ++ ++ Y+PP TRD ++ SR+N
Sbjct: 466 FPSLVSTG--NTVESSEDSDTYIPPPTRDQNIERSRNN 501
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 48 YNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPP 149
Y+ PPPL PS+P+ +A +Y+ P P
Sbjct: 103 YSMAPPPLILPSSPSYVAPVSAPSYSLTPSISIP 136
>Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical
protein ZC247.3 protein.
Length = 405
Score = 27.5 bits (58), Expect = 3.7
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +3
Query: 3 RVQIKSMTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDN 164
R I M FY PP +++ +P T N +T AP + PT N
Sbjct: 315 RDDIVDMFPNDQQFYPPPPPSNVQFFCDPYTTSPNNPETIQMAPQFAVPTENMN 368
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 27.5 bits (58), Expect = 3.7
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 5/85 (5%)
Frame = +3
Query: 21 MTDERGNFYYNT-----PPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRS 185
MTDE ++ T P YPS P+T F P P T+ T+ S
Sbjct: 161 MTDEEEEYFDETVKMSPQSPKPTYPSVPSTFEFEKYPKSTEEPTSTPSTSTSTTTTTTTS 220
Query: 186 NSTNSVAIAPYNKSKEPTLDAGESI 260
+T + + + T ++ E I
Sbjct: 221 TTTTTTEAPTTTTTIKTTTESIEPI 245
>X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein
protein.
Length = 382
Score = 27.5 bits (58), Expect = 3.7
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +3
Query: 3 RVQIKSMTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDN 164
R I M FY PP +++ +P T N +T AP + PT N
Sbjct: 292 RDDIVDMFPNDQQFYPPPPPSNVQFFCDPYTTSPNNPETIQMAPQFAVPTENMN 345
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 27.5 bits (58), Expect = 3.7
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +3
Query: 54 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYN---K 224
TPPPP P PA A+ AQ AP P +T++ N+V AP
Sbjct: 374 TPPPPAPPP--PAPAVPEEAQAPTPAPEEAPEA--QIPAETAQIPPENAVPEAPEEPAPT 429
Query: 225 SKEPTLDAGES 257
+ P + AGE+
Sbjct: 430 TTPPPISAGEA 440
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 27.5 bits (58), Expect = 3.7
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +3
Query: 54 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYN---K 224
TPPPP P PA A+ AQ AP P +T++ N+V AP
Sbjct: 386 TPPPPAPPP--PAPAVPEEAQAPTPAPEEAPEA--QIPAETAQIPPENAVPEAPEEPAPT 441
Query: 225 SKEPTLDAGES 257
+ P + AGE+
Sbjct: 442 TTPPPISAGEA 452
>Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical
protein C27A7.1b protein.
Length = 824
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 81 SNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYN 221
SNP+ F NA+ +N P ++P + + ++ S+ + P N
Sbjct: 640 SNPSNFTFLNAKYQSNCPSHIPTGSLTIRQNSQLSSMVDERIDVPNN 686
>Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical
protein C27A7.1a protein.
Length = 829
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 81 SNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYN 221
SNP+ F NA+ +N P ++P + + ++ S+ + P N
Sbjct: 645 SNPSNFTFLNAKYQSNCPSHIPTGSLTIRQNSQLSSMVDERIDVPNN 691
>Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical
protein C11H1.5 protein.
Length = 528
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +3
Query: 261 WYNKCVDFVQKIIRYYRCNDMSELSPLMIHFINTIRDMC 377
WY V Y RC+ M E+ L I F +D+C
Sbjct: 471 WYRPRGSSVCVPYHYPRCSSMEEMEELPILFEQNCQDLC 509
>Z69885-5|CAA93756.2| 882|Caenorhabditis elegans Hypothetical
protein T04C10.1 protein.
Length = 882
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 140 RAAYDARQQNGHEPQQQHKLGSDRTVQQEQRT 235
R + A QQN H P Q+ + QQ Q+T
Sbjct: 731 RRRFSAHQQNYHNPNYQYSQPQQQQQQQYQQT 762
>Z68108-15|CAJ58502.1| 582|Caenorhabditis elegans Hypothetical
protein T05A10.1k protein.
Length = 582
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 104 HQRAN--LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRR 253
HQ A QQ + + A ARQQ + Q Q + +++ QQ+ + A+ R+
Sbjct: 143 HQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQ 194
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 104 HQRAN--LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRR 253
HQ A QQ + + A ARQQ + Q Q + +++ QQ+ + A+ R+
Sbjct: 120 HQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQ 171
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 104 HQRAN--LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRR 253
HQ A QQ + + A ARQQ + Q Q + +++ QQ+ + A+ R+
Sbjct: 120 HQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQ 171
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 104 HQRAN--LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRR 253
HQ A QQ + + A ARQQ + Q Q + +++ QQ+ + A+ R+
Sbjct: 120 HQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQ 171
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 104 HQRAN--LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRR 253
HQ A QQ + + A ARQQ + Q Q + +++ QQ+ + A+ R+
Sbjct: 120 HQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQ 171
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 104 HQRAN--LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRR 253
HQ A QQ + + A ARQQ + Q Q + +++ QQ+ + A+ R+
Sbjct: 120 HQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQ 171
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 104 HQRAN--LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRR 253
HQ A QQ + + A ARQQ + Q Q + +++ QQ+ + A+ R+
Sbjct: 120 HQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQ 171
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 104 HQRAN--LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRR 253
HQ A QQ + + A ARQQ + Q Q + +++ QQ+ + A+ R+
Sbjct: 120 HQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQ 171
>Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical
protein T05A10.1b protein.
Length = 725
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 104 HQRAN--LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRR 253
HQ A QQ + + A ARQQ + Q Q + +++ QQ+ + A+ R+
Sbjct: 143 HQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQ 194
>U97593-7|AAB52878.1| 591|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform b protein.
Length = 591
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3
Query: 75 YPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 233
Y +N + + YN P Y PP N T+ +NS++S YN S +
Sbjct: 68 YNTNQVDYVLGHKDKYNEGPHYQPPII--NSSATAANNSSSST--HHYNSSSQ 116
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3
Query: 75 YPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 233
Y +N + + YN P Y PP N T+ +NS++S YN S +
Sbjct: 487 YNTNQVDYVLGHKDKYNEGPHYQPPII--NSSATAANNSSSST--HHYNSSSQ 535
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3
Query: 75 YPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 233
Y +N + + YN P Y PP N T+ +NS++S YN S +
Sbjct: 652 YNTNQVDYVLGHKDKYNEGPHYQPPII--NSSATAANNSSSST--HHYNSSSQ 700
>AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B
protein.
Length = 692
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 104 HQRAN--LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRR 253
HQ A QQ + + A ARQQ + Q Q + +++ QQ+ + A+ R+
Sbjct: 143 HQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQ 194
>AY064464-1|AAL40874.1| 882|Caenorhabditis elegans minibrain kinase
protein.
Length = 882
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 140 RAAYDARQQNGHEPQQQHKLGSDRTVQQEQRT 235
R + A QQN H P Q+ + QQ Q+T
Sbjct: 731 RRRFSAHQQNYHNPNYQYSQPQQQQQQQYQQT 762
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = +3
Query: 123 NNAPGYVPPTTRDNKMDTSRS----NSTNSVAIAPYNKSKEPTLDAGESIW 263
NN P VPP +R N + T S P+ S +P + S W
Sbjct: 392 NNQPPLVPPPSRSNLLPTQNDPYLPQFLQSTQPTPHPNSHDPMMAPSRSWW 442
>AF104859-1|AAC79091.1| 93|Caenorhabditis elegans putative
RNA-binding protein PRP-1 protein.
Length = 93
Score = 27.1 bits (57), Expect = 4.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 173 HEPQQQHKLGSDRTVQQEQRT 235
H+PQQQ + + VQQ+Q+T
Sbjct: 11 HQPQQQQQQAPQQPVQQQQQT 31
>AF063007-5|AAD47125.1| 712|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 59
protein.
Length = 712
Score = 27.1 bits (57), Expect = 4.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 173 HEPQQQHKLGSDRTVQQEQRT 235
H+PQQQ + + VQQ+Q+T
Sbjct: 482 HQPQQQQQQAPQQPVQQQQQT 502
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 26.6 bits (56), Expect = 6.4
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Frame = +3
Query: 54 TPPP----PLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVA 206
TPPP P+ YP A T Q PPTT ++T ST S+A
Sbjct: 96 TPPPSTLPPITYPRPTVGAPITTQQVLITETTTQPPTT-TTTLETPAPESTPSMA 149
>Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 57 PPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNK 167
P L P + ++++T QTY PGY+PP + DNK
Sbjct: 142 PLTNLTAPIDAMSSMYTWPQTY---PGYLPP-SEDNK 174
>Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 57 PPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNK 167
P L P + ++++T QTY PGY+PP + DNK
Sbjct: 142 PLTNLTAPIDAMSSMYTWPQTY---PGYLPP-SEDNK 174
>Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical
protein T18D3.1 protein.
Length = 523
Score = 26.6 bits (56), Expect = 6.4
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +2
Query: 59 SAAAEVSL*SGNGHI--HQRANLQQRARVRAAYDARQQ-NGHEPQQQHKLGSDRTVQQEQ 229
S+AA S S + H +R +++ R RA A+++ +GH +++ K + +E+
Sbjct: 418 SSAASTSSSSSSKHETKEERKARKEKERERAEKKAKKEKDGHREEEKPKKKDKKHETEEE 477
Query: 230 RTDARRR 250
R + +R+
Sbjct: 478 RAERKRK 484
>Z48241-4|CAA88284.1| 468|Caenorhabditis elegans Hypothetical
protein C32A3.1b protein.
Length = 468
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 113 ANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRRIYLVQQ 271
A LQQ+ +QQ +QQ + + QQ+Q+ + +R+++ L QQ
Sbjct: 318 AQLQQQQNKMRLMQQQQQEMQRIEQQRRQQIMQQQQQQQQQEHQRQQMLLQQQ 370
>Z48241-3|CAC42265.1| 490|Caenorhabditis elegans Hypothetical
protein C32A3.1a protein.
Length = 490
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 113 ANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRRIYLVQQ 271
A LQQ+ +QQ +QQ + + QQ+Q+ + +R+++ L QQ
Sbjct: 340 AQLQQQQNKMRLMQQQQQEMQRIEQQRRQQIMQQQQQQQQQEHQRQQMLLQQQ 392
>U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical
protein C46G7.3 protein.
Length = 715
Score = 26.6 bits (56), Expect = 6.4
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +3
Query: 24 TDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSV 203
T + N +T P LR N + + + T +N + P T + DT+ S TN V
Sbjct: 266 TTHKTNECESTTSPNLREELNLSPIRYPASSTPHNRLTFAPTNT-NRLQDTTNSPRTNDV 324
Query: 204 AIAP 215
P
Sbjct: 325 TFVP 328
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/51 (29%), Positives = 18/51 (35%)
Frame = +3
Query: 57 PPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAI 209
P P P P T + Y P PP + + SR NS S I
Sbjct: 831 PMPDYEPPQPPQQRRRTESSGYRGGPPPPPPMPQQQPREMSRRNSVASTRI 881
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 57 PPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNK 167
P L P + ++++T QTY PGY+PP + DNK
Sbjct: 142 PLTNLTAPIDAMSSMYTWPQTY---PGYLPP-SEDNK 174
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defective
protein 27,isoform a protein.
Length = 1129
Score = 26.6 bits (56), Expect = 6.4
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = +2
Query: 38 QFLLQHPSAAAEVSL*SGNGHIHQR---ANLQQRARVRAAY-----DARQQNGHEPQQQH 193
Q LQ A +V H HQ+ A QQ+ R AA + R+Q E ++QH
Sbjct: 873 QMALQQQLEAHQVQFQLMMAHQHQQKMIAEQQQQQRHAAAQQLREREQREQRERERERQH 932
Query: 194 KLGSDRTVQQEQRTDA 241
+ + + + Q+Q+ A
Sbjct: 933 QQQAQQALHQQQQQHA 948
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 57 PPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNK 167
P L P + ++++T QTY PGY+PP + DNK
Sbjct: 142 PLTNLTAPIDAXSSMYTWPQTY---PGYLPP-SEDNK 174
>AF241847-1|AAF71523.1| 468|Caenorhabditis elegans LAG-3B protein.
Length = 468
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 113 ANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRRIYLVQQ 271
A LQQ+ +QQ +QQ + + QQ+Q+ + +R+++ L QQ
Sbjct: 318 AQLQQQQNKMRLMQQQQQEMQRIEQQRRQQIMQQQQQQQQQEHQRQQMLLQQQ 370
>AF241846-1|AAF71522.1| 490|Caenorhabditis elegans LAG-3A protein.
Length = 490
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 113 ANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRRIYLVQQ 271
A LQQ+ +QQ +QQ + + QQ+Q+ + +R+++ L QQ
Sbjct: 340 AQLQQQQNKMRLMQQQQQEMQRIEQQRRQQIMQQQQQQQQQEHQRQQMLLQQQ 392
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 26.6 bits (56), Expect = 6.4
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = +2
Query: 38 QFLLQHPSAAAEVSL*SGNGHIHQR---ANLQQRARVRAAY-----DARQQNGHEPQQQH 193
Q LQ A +V H HQ+ A QQ+ R AA + R+Q E ++QH
Sbjct: 873 QMALQQQLEAHQVQFQLMMAHQHQQKMIAEQQQQQRHAAAQQLREREQREQRERERERQH 932
Query: 194 KLGSDRTVQQEQRTDA 241
+ + + + Q+Q+ A
Sbjct: 933 QQQAQQALHQQQQQHA 948
>Z22174-1|CAA80128.1| 732|Caenorhabditis elegans Hypothetical
protein K01B6.1 protein.
Length = 732
Score = 26.2 bits (55), Expect = 8.5
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +2
Query: 125 QRARVRAAYDARQQNG---HEPQQQHKLGSDRTVQQEQRTDARRRRIY-LVQQMCGFCSK 292
Q+A V+ +QQ + QQQ + ++ Q Q + + R+R Y Q C C K
Sbjct: 97 QQAMVQFHNQQKQQQQIIQQQQQQQQQQQQNQNPSQSQSSSSDRKRSYPCTFQYCVICQK 156
Query: 293 NY*ILQVQ*HVR 328
+ ++ H+R
Sbjct: 157 DVHSSKLPCHIR 168
>U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying
defective protein 27,isoform c protein.
Length = 612
Score = 26.2 bits (55), Expect = 8.5
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +2
Query: 38 QFLLQHPSAAAEVSL*SGNGHIHQR-ANLQQRARVRAAY-----DARQQNGHEPQQQHKL 199
Q LQ A +V L + H + A QQ+ R AA + R+Q E ++QH+
Sbjct: 358 QMALQQQLEAHQVQLMMAHQHQQKMIAEQQQQQRHAAAQQLREREQREQRERERERQHQQ 417
Query: 200 GSDRTVQQEQRTDA 241
+ + + Q+Q+ A
Sbjct: 418 QAQQALHQQQQQHA 431
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defective
protein 27,isoform b protein.
Length = 1124
Score = 26.2 bits (55), Expect = 8.5
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +2
Query: 38 QFLLQHPSAAAEVSL*SGNGHIHQR-ANLQQRARVRAAY-----DARQQNGHEPQQQHKL 199
Q LQ A +V L + H + A QQ+ R AA + R+Q E ++QH+
Sbjct: 870 QMALQQQLEAHQVQLMMAHQHQQKMIAEQQQQQRHAAAQQLREREQREQRERERERQHQQ 929
Query: 200 GSDRTVQQEQRTDA 241
+ + + Q+Q+ A
Sbjct: 930 QAQQALHQQQQQHA 943
>U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical
protein C56G2.1a protein.
Length = 867
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 98 HIHQRANLQQRARVRAAYDARQQNG-HEPQQQHKLGSDRTVQQEQRTDARRR 250
H+ Q+ N + ++ R ++G H+PQQQH+ + +Q Q +RR
Sbjct: 391 HLQQQHNKNRSSQKRKGGRVNGRDGVHQPQQQHQ--QQKKEEQGQIKKGQRR 440
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = +3
Query: 123 NNAPGYVPPTTRDNKMDTSRS----NSTNSVAIAPYNKSKEPTLDAGESIW 263
NN P VPP +R N + T S P +S +P + S W
Sbjct: 488 NNQPPLVPPPSRSNLLPTQNDPYLPQFLQSTQPTPQPQSHDPMMAPSRSWW 538
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = +3
Query: 123 NNAPGYVPPTTRDNKMDTSRS----NSTNSVAIAPYNKSKEPTLDAGESIW 263
NN P VPP +R N + T S P +S +P + S W
Sbjct: 488 NNQPPLVPPPSRSNLLPTQNDPYLPQFLQSTQPTPQPQSHDPMMAPSRSWW 538
>AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical
protein Y79H2A.1b protein.
Length = 466
Score = 26.2 bits (55), Expect = 8.5
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = +2
Query: 41 FLLQHPSAAAEVSL*SGNGHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQ 220
FL P + + +R +QQ +R R Q + QQQ K+ + Q
Sbjct: 77 FLAATPDLFKKTETSVNKPQMEERMYMQQMMAMRMMRMRRLQAAYYQQQQMKMAYMQQQQ 136
Query: 221 QEQRTDARRRR 253
Q+ + +A R++
Sbjct: 137 QQMQEEAARQQ 147
>AL023493-2|CAD44137.1| 909|Caenorhabditis elegans Hypothetical
protein H20J18.1b protein.
Length = 909
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 104 HQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRRIYLVQQM 274
HQ Q A+ +A A+ Q + QQQH+L + QQ + + ++ QQ+
Sbjct: 110 HQAQQAQAHAQAQAQAQAQAQA--QVQQQHQLQAQAHAQQHLQAAQQAQQAQQAQQL 164
>AL023493-1|CAA18898.1| 947|Caenorhabditis elegans Hypothetical
protein H20J18.1a protein.
Length = 947
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 104 HQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRRIYLVQQM 274
HQ Q A+ +A A+ Q + QQQH+L + QQ + + ++ QQ+
Sbjct: 110 HQAQQAQAHAQAQAQAQAQAQA--QVQQQHQLQAQAHAQQHLQAAQQAQQAQQAQQL 164
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = +3
Query: 123 NNAPGYVPPTTRDNKMDTSRS----NSTNSVAIAPYNKSKEPTLDAGESIW 263
NN P VPP +R N + T S P +S +P + S W
Sbjct: 488 NNQPPLVPPPSRSNLLPTQNDPYLPQFLQSTQPTPQPQSHDPMMAPSRSWW 538
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,167,719
Number of Sequences: 27780
Number of extensions: 161458
Number of successful extensions: 891
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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