Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27f05
         (429 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P41426 Cluster: Uncharacterized 36.6 kDa protein in EGT...   168   5e-41
UniRef50_Q2NP66 Cluster: Actin rearrangement inducing factor 1; ...    68   1e-10
UniRef50_Q1HGX2 Cluster: Arif-1; n=1; Antheraea pernyi nucleopol...    66   2e-10
UniRef50_Q91GN2 Cluster: ARIF-1; n=1; Epiphyas postvittana NPV|R...    66   4e-10
UniRef50_O10280 Cluster: Uncharacterized 34.7 kDa protein; n=1; ...    53   2e-06
UniRef50_Q4X2H0 Cluster: Putative uncharacterized protein; n=6; ...    34   1.4  
UniRef50_A5IC03 Cluster: D-alanyl-D-alanine carboxypeptidase; n=...    32   4.4  
UniRef50_A1AUH5 Cluster: Polysaccharide export protein precursor...    31   7.7  

>UniRef50_P41426 Cluster: Uncharacterized 36.6 kDa protein in
           EGT-IAP1 intergenic region; n=6;
           Nucleopolyhedrovirus|Rep: Uncharacterized 36.6 kDa
           protein in EGT-IAP1 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 319

 Score =  168 bits (408), Expect = 5e-41
 Identities = 88/120 (73%), Positives = 92/120 (76%)
 Frame = +3

Query: 6   DHEPTVFNQNYSVIIMGVLTILAVQCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDID 185
           DHEPTVFNQNY VIIMGVLTILAVQCWNLYVQLKEMR NIY+KRRAEAEKASY+HYCDID
Sbjct: 186 DHEPTVFNQNYPVIIMGVLTILAVQCWNLYVQLKEMRHNIYMKRRAEAEKASYEHYCDID 245

Query: 186 YCLEEERESNSKLLEVVSEGRNSSSVAAVXXXXXXXXXXXXXXXXXXXXXFIALSDLTSQ 365
           Y   EERESNS+LLEVVSEGRNSSSV AV                     FIA SDL+SQ
Sbjct: 246 Y-RREERESNSRLLEVVSEGRNSSSVVAV--THPPSTTSTTTSVSETLSSFIAPSDLSSQ 302


>UniRef50_Q2NP66 Cluster: Actin rearrangement inducing factor 1;
           n=4; Nucleopolyhedrovirus|Rep: Actin rearrangement
           inducing factor 1 - Hyphantria cunea nuclear
           polyhedrosis virus (HcNPV)
          Length = 365

 Score = 67.7 bits (158), Expect = 1e-10
 Identities = 32/82 (39%), Positives = 52/82 (63%)
 Frame = +3

Query: 3   RDHEPTVFNQNYSVIIMGVLTILAVQCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDI 182
           R +EPT+FNQN   ++M  + ++ + CWN+Y+  KEMR+   I +  E+ +  YD   D 
Sbjct: 188 RHNEPTIFNQNQVALMMIAILLIVLHCWNMYILRKEMRKRPVI-QSGESAELKYD---DT 243

Query: 183 DYCLEEERESNSKLLEVVSEGR 248
           D   EE+ +SN ++LE++SE R
Sbjct: 244 DKEEEEQFQSNKRMLEIISEDR 265


>UniRef50_Q1HGX2 Cluster: Arif-1; n=1; Antheraea pernyi
           nucleopolyhedrovirus|Rep: Arif-1 - Antheraea pernyi
           nuclear polyhedrosis virus (ApNPV)
          Length = 324

 Score = 66.5 bits (155), Expect = 2e-10
 Identities = 37/86 (43%), Positives = 53/86 (61%)
 Frame = +3

Query: 3   RDHEPTVFNQNYSVIIMGVLTILAVQCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDI 182
           R +EPTVF +N   + + V  I  +QCWN YV+ K+MR     + + +A+  S D Y   
Sbjct: 183 RHNEPTVFTENQWTVTVAVFMIFVIQCWNAYVRHKDMR----FQPKQDAQ--SVDGYDTA 236

Query: 183 DYCLEEERESNSKLLEVVSEGRNSSS 260
           D   EEER+S  +LLE+VSEGR S++
Sbjct: 237 DE--EEERQSKLRLLEIVSEGRQSAT 260


>UniRef50_Q91GN2 Cluster: ARIF-1; n=1; Epiphyas postvittana NPV|Rep:
           ARIF-1 - Epiphyas postvittana nucleopolyhedrovirus
           (EppoMNPV)
          Length = 307

 Score = 65.7 bits (153), Expect = 4e-10
 Identities = 39/86 (45%), Positives = 50/86 (58%)
 Frame = +3

Query: 12  EPTVFNQNYSVIIMGVLTILAVQCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDIDYC 191
           EPTVFNQN S +IM  LTI+ + CWN+YVQ KEMR     K     E      Y      
Sbjct: 187 EPTVFNQNPSALIMMTLTIIIIFCWNMYVQQKEMR----TKPEPAVESNEEGGY------ 236

Query: 192 LEEERESNSKLLEVVSEGRNSSSVAA 269
             +E ES  +LLEV++EGR+S++  A
Sbjct: 237 TTDEEESQLRLLEVMTEGRSSTTGTA 262


>UniRef50_O10280 Cluster: Uncharacterized 34.7 kDa protein; n=1;
           Orgyia pseudotsugata MNPV|Rep: Uncharacterized 34.7 kDa
           protein - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 298

 Score = 53.2 bits (122), Expect = 2e-06
 Identities = 29/73 (39%), Positives = 37/73 (50%)
 Frame = +3

Query: 3   RDHEPTVFNQNYSVIIMGVLTILAVQCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDI 182
           R  EPTVFNQN   + M  L  + + CWN+YVQ KE RR    + R        +   + 
Sbjct: 179 RHDEPTVFNQNQGALTMLALLAIVMHCWNMYVQQKETRRKPN-RARNITNTLLMETEKEY 237

Query: 183 DYCLEEERESNSK 221
           D   EEE ESN +
Sbjct: 238 DTAEEEEHESNMR 250


>UniRef50_Q4X2H0 Cluster: Putative uncharacterized protein; n=6;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 1666

 Score = 33.9 bits (74), Expect = 1.4
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -1

Query: 255 CYFCLRKPLPAI*SYFLVLLRGNSQCRNNDHKMLFRLRRAFLC 127
           CYFC++  LP + S++L  +     C+N + K + +   A LC
Sbjct: 853 CYFCIKYNLPILNSFYLFNILHTMDCKNKEMKKMGQDHIAELC 895


>UniRef50_A5IC03 Cluster: D-alanyl-D-alanine carboxypeptidase; n=6;
           Gammaproteobacteria|Rep: D-alanyl-D-alanine
           carboxypeptidase - Legionella pneumophila (strain Corby)
          Length = 430

 Score = 32.3 bits (70), Expect = 4.4
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = +3

Query: 78  QCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDIDYCLEEERESNSKLLEVVSEGRNSS 257
           Q W  Y  +++  RN  + R ++ +     H  D  YCL    + N+  L  V  G  S 
Sbjct: 242 QKWFTYNGIRQPNRNRLLWRDSQVDGIKTGHTNDAGYCLVSSAKRNNMRLLAVVLGEPSD 301

Query: 258 SVAA 269
           SV A
Sbjct: 302 SVRA 305


>UniRef50_A1AUH5 Cluster: Polysaccharide export protein precursor;
           n=4; Desulfuromonadales|Rep: Polysaccharide export
           protein precursor - Pelobacter propionicus (strain DSM
           2379)
          Length = 977

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = +3

Query: 108 EMRRNIYIKRRAEAEKASYDHYC---DIDYCLEEERESNSKLLEVVSEGRNSSSV 263
           E  R +   R  E EK+ YD YC   D++     ERE  S++   +S+ R+   +
Sbjct: 184 ERARVMEYSRITEIEKSRYDRYCSIVDLETVSSNEREDVSEIERAISDPRSDDEL 238


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 322,399,431
Number of Sequences: 1657284
Number of extensions: 4790638
Number of successful extensions: 13060
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13055
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)