Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27f05
         (429 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49724-1|AAB08449.1|  635|Drosophila melanogaster merlin protein.      29   2.0  
AY094998-1|AAM11326.1|  635|Drosophila melanogaster GH01330p pro...    29   2.0  
AE014298-2915|AAF49005.1|  635|Drosophila melanogaster CG14228-P...    29   2.0  
AE014297-1899|AAF55098.1|  556|Drosophila melanogaster CG14855-P...    29   3.5  
AY113213-1|AAM29218.1|  975|Drosophila melanogaster AT07178p pro...    28   4.6  
BT021343-1|AAX33491.1|  647|Drosophila melanogaster LP21163p pro...    27   8.1  
AF069037-1|AAC27488.1|  428|Drosophila melanogaster RGS7 protein.      27   8.1  
AE014298-2492|AAF48674.2|  647|Drosophila melanogaster CG9108-PA...    27   8.1  
AE014134-3064|AAF53778.2|  868|Drosophila melanogaster CG31797-P...    27   8.1  
AE013599-1778|AAM71009.1|  975|Drosophila melanogaster CG30485-P...    27   8.1  

>U49724-1|AAB08449.1|  635|Drosophila melanogaster merlin protein.
          Length = 635

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +3

Query: 132 KRRAEAEKASYDHYCDIDYCLEEERESNSKLLEVVSEGRNSSS 260
           KR AE EK   +  C        ERE+ ++LLE ++ GR SS+
Sbjct: 440 KREAETEKLRKELIC----AKMAEREATARLLEFLNSGRKSST 478


>AY094998-1|AAM11326.1|  635|Drosophila melanogaster GH01330p
           protein.
          Length = 635

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +3

Query: 132 KRRAEAEKASYDHYCDIDYCLEEERESNSKLLEVVSEGRNSSS 260
           KR AE EK   +  C        ERE+ ++LLE ++ GR SS+
Sbjct: 440 KREAETEKLRKELIC----AKMAEREATARLLEFLNSGRKSST 478


>AE014298-2915|AAF49005.1|  635|Drosophila melanogaster CG14228-PA
           protein.
          Length = 635

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +3

Query: 132 KRRAEAEKASYDHYCDIDYCLEEERESNSKLLEVVSEGRNSSS 260
           KR AE EK   +  C        ERE+ ++LLE ++ GR SS+
Sbjct: 440 KREAETEKLRKELIC----AKMAEREATARLLEFLNSGRKSST 478


>AE014297-1899|AAF55098.1|  556|Drosophila melanogaster CG14855-PA
           protein.
          Length = 556

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +3

Query: 102 LKEMRRNIYIKRRAEAEKASYDH--YCDIDYCLEEERESNSKLLEVVSEGRNSSS 260
           ++ + R   I RR  A+K   D   YC+  Y  ++ +E ++KLL+++   R  S+
Sbjct: 274 IRRLERVAKINRRQVADKDFKDFRIYCEQHYRKDKNQEEHAKLLDMLKTPRMRST 328


>AY113213-1|AAM29218.1|  975|Drosophila melanogaster AT07178p
           protein.
          Length = 975

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 117 RNIYIKRRAEAEKASYDHYCDIDYCLEEERESNSKLLEVVS 239
           RN   KR   +EK  YD +C I+  ++E+  S +     VS
Sbjct: 348 RNEKKKRVTSSEKKCYDDHCKIEEDIQEDSSSENTFYASVS 388


>BT021343-1|AAX33491.1|  647|Drosophila melanogaster LP21163p
           protein.
          Length = 647

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 114 RRNIYIKRRAEAEKASYDHYCDIDY 188
           RR I + + AEA  A YD Y + DY
Sbjct: 448 RRTIKVSKAAEALVAYYDQYNEFDY 472


>AF069037-1|AAC27488.1|  428|Drosophila melanogaster RGS7 protein.
          Length = 428

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 114 RRNIYIKRRAEAEKASYDHYCDIDY 188
           RR I + + AEA  A YD Y + DY
Sbjct: 229 RRTIKVSKAAEALVAYYDQYNEFDY 253


>AE014298-2492|AAF48674.2|  647|Drosophila melanogaster CG9108-PA
           protein.
          Length = 647

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 114 RRNIYIKRRAEAEKASYDHYCDIDY 188
           RR I + + AEA  A YD Y + DY
Sbjct: 448 RRTIKVSKAAEALVAYYDQYNEFDY 472


>AE014134-3064|AAF53778.2|  868|Drosophila melanogaster CG31797-PA
           protein.
          Length = 868

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 105 KEMRRNIYIKRRAEAEKASYDHYCDIDYC 191
           ++MR   YI+ R + E  +  H CD  YC
Sbjct: 780 RQMRHQEYIRDRCKTEYRAPRHQCDPIYC 808


>AE013599-1778|AAM71009.1|  975|Drosophila melanogaster CG30485-PA
           protein.
          Length = 975

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 117 RNIYIKRRAEAEKASYDHYCDIDYCLEEERESNSKLLEVVS 239
           RN   KR   +EK  YD +C I+  ++E+  S +     VS
Sbjct: 348 RNGKKKRVTSSEKKCYDDHCKIEEDVQEDSSSENTFYASVS 388


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,006,458
Number of Sequences: 53049
Number of extensions: 245149
Number of successful extensions: 596
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)