Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27e22
(453 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014135-30|ABC65827.1| 4056|Drosophila melanogaster CG33978-PA ... 30 1.3
AE013599-125|AAM68336.3| 226|Drosophila melanogaster CG11680-PB... 30 1.7
AF005239-1|AAC23709.1| 460|Drosophila melanogaster DEAD-box hel... 29 2.9
M74121-1|AAC41573.1| 1293|Drosophila melanogaster maleless prote... 29 3.9
BT003604-1|AAO39607.1| 1191|Drosophila melanogaster GM01778p pro... 29 3.9
AE013599-123|AAF57297.1| 1293|Drosophila melanogaster CG11680-PA... 29 3.9
BT024229-1|ABC86291.1| 1428|Drosophila melanogaster LP01445p pro... 28 6.8
AE014296-1295|AAS65061.1| 1400|Drosophila melanogaster CG33275-P... 28 6.8
AE014296-1294|AAS65060.1| 1876|Drosophila melanogaster CG33275-P... 28 6.8
>AE014135-30|ABC65827.1| 4056|Drosophila melanogaster CG33978-PA
protein.
Length = 4056
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +1
Query: 148 ANFKIFKKTSLFSNTVLS*MLSLIICASAVSTRSKN*CASILLFLLLNK 294
A F FK +LFS+T+L+ M S+I S ST+ KN C L L L K
Sbjct: 3343 AAFNNFKNKNLFSSTILNKMWSVISTNSKSSTK-KN-CTEDLCKLFLAK 3389
>AE013599-125|AAM68336.3| 226|Drosophila melanogaster CG11680-PB,
isoform B protein.
Length = 226
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/89 (28%), Positives = 41/89 (46%)
Frame = -2
Query: 284 NRNNKIDAHQFFERVDTAEAQIIKDSIYDNTVLLNRDVFLNILKFANDVFDNKAYMYVDD 105
NR + ID Q ++ AEA + +I+ N + N LNI K N++ D+ Y V
Sbjct: 135 NRYSVIDRIQEQRDMNEAEAFDVNAAIHGNWTIENAKERLNIYKQTNNIRDDYKYTPV-G 193
Query: 104 SEVSRYYNAVVKMKRLVINVRDPSLRQSL 18
E +RY + ++ + LR +L
Sbjct: 194 PEHARYVLPFQLSSACISDLTEYGLRPNL 222
>AF005239-1|AAC23709.1| 460|Drosophila melanogaster DEAD-box
helicase protein.
Length = 460
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 358 LQTLVQFYENCKNVKTRYKIINGRFGKISI 447
L+ + Q+Y CKN + +Y I +G IS+
Sbjct: 285 LENIKQYYVKCKNEEGKYNAIQNIYGCISV 314
>M74121-1|AAC41573.1| 1293|Drosophila melanogaster maleless protein
protein.
Length = 1293
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -2
Query: 284 NRNNKIDAHQFFERVDTAEAQIIKDSIYDNTVLLNRDVFLNILKFANDVFDNKAY 120
NR + ID Q ++ AEA + +I+ N + N LNI K N++ D+ Y
Sbjct: 135 NRYSVIDRIQEQRDMNEAEAFDVNAAIHGNWTIENAKERLNIYKQTNNIRDDYKY 189
>BT003604-1|AAO39607.1| 1191|Drosophila melanogaster GM01778p
protein.
Length = 1191
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -2
Query: 218 IKDSIYDNTVLLNRDVFLNILKFANDVFDNKAYMYVDDSEVSRYYNAVVK 69
++D I + T L D N+ KF+ +DN++ + + E +YY +K
Sbjct: 335 LEDEISEVTSWLGSDGAENLQKFSQLHWDNESQLRTQEQEFEKYYFIAMK 384
>AE013599-123|AAF57297.1| 1293|Drosophila melanogaster CG11680-PA,
isoform A protein.
Length = 1293
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -2
Query: 284 NRNNKIDAHQFFERVDTAEAQIIKDSIYDNTVLLNRDVFLNILKFANDVFDNKAY 120
NR + ID Q ++ AEA + +I+ N + N LNI K N++ D+ Y
Sbjct: 135 NRYSVIDRIQEQRDMNEAEAFDVNAAIHGNWTIENAKERLNIYKQTNNIRDDYKY 189
>BT024229-1|ABC86291.1| 1428|Drosophila melanogaster LP01445p
protein.
Length = 1428
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -2
Query: 218 IKDSIYDNTVLLNRDVFLNILKFANDVFDNKAYMYVDDSEVSRYYNAVVK 69
++D I + T + D N+ KF+ +DN++ + + E +YY +K
Sbjct: 572 LEDEISEVTSWMGSDGAENLQKFSQLHWDNESQLRTQEQEFEKYYFIAMK 621
>AE014296-1295|AAS65061.1| 1400|Drosophila melanogaster CG33275-PB,
isoform B protein.
Length = 1400
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -2
Query: 218 IKDSIYDNTVLLNRDVFLNILKFANDVFDNKAYMYVDDSEVSRYYNAVVK 69
++D I + T + D N+ KF+ +DN++ + + E +YY +K
Sbjct: 544 LEDEISEVTSWMGSDGAENLQKFSQLHWDNESQLRTQEQEFEKYYFIAMK 593
>AE014296-1294|AAS65060.1| 1876|Drosophila melanogaster CG33275-PA,
isoform A protein.
Length = 1876
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -2
Query: 218 IKDSIYDNTVLLNRDVFLNILKFANDVFDNKAYMYVDDSEVSRYYNAVVK 69
++D I + T + D N+ KF+ +DN++ + + E +YY +K
Sbjct: 1020 LEDEISEVTSWMGSDGAENLQKFSQLHWDNESQLRTQEQEFEKYYFIAMK 1069
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,823,504
Number of Sequences: 53049
Number of extensions: 365552
Number of successful extensions: 1946
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1924
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -